Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013095_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:4680234:4684555:-1 gene:Zm00001d013095 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication factor C subunit 3
Sequence

ATGTTGTGGGTAGACAAGTACCGGCCGAAAACCCTAGACAAGGTCACCGTCCACGACCAG
GTTGCGCGGAACCTCAGAAAGTTCGTGTCGGAGCAGGATTGCCCGCACCTGCTGTTCTAT
GGGCCGTCGGGGTCCGGGAAGAAAACCCTAATCCTCGCGCTCATCAAGCAGATGTTTGGC
GCCGGCGCGGAGAAGGTTAAGCTGGAGAATAAGACATGGAAAATTGATACTGGAACAAGG
ACACTTGAGATAGAATTGGCGATGTTGTCAAGTGCTCACCATGTAGAGATGAACCCCAGT
GATGCTGGCTTTCAGGACAGGTATGTTGTCCAGGAGATCATTAAAGAGATGGCCAAGAAC
AGGCCAATTGATGCCAAAGGAAGGAGAGCATTTAAAGTCCTTGTGTTAAATGAAGTTGAC
AAGCTCTCAAGAGAAGCCCAGCATTCCCTCCGTAGGACTATGGAGAAGTATAGCTCATCA
TGCAGACTGATCCTATGCTGTAACAGCTCCTCAAAAGTGACAGAGGCTGTAAGATCCCGT
TGCTTAAATGTGCGAGTAAACGCACCCAGTGAAGATCAGATTGTCCAAGTTCTAGAATTC
ATTGGGAAGAAAGAAAACCTGATTCTTCCAGCTGGATTTGCTGCTCGTATCGCAGCACAA
TCAAACCGTAATCTGAGACGTGCTATACTGTTTTTTGAGACTTGCAAAGTTCAACAATAC
CCATTTACATCAAATCAAGTGGCGCCTCCTCTTGATTGGGAGCAATACGTGTCTGAAATA
GCCACGGATATACTGACAGAACAAAGCCCTAAAAGGCTATTTGATGTACGCCAGAAATTC
TATGAATTACTCGTCAATTGTATCCCACCCGAAAGTATTTTGAAGAAGTTGCTAGCAGAG
TTACTGAGGAAGTTAGATGCTGATCTGAAATATGAAATCTGTCGCTGGGCCGCACACTAC
GAGCACAAGATGCGCCTTGGATCAAAGGCTATTTTTCATCTGGAAGCTTTCGTGGCCAAG
TTCATGAGCATTTACAAGGAGTTCCTGGTGGCTACATTTGGTTGA

Peptide Sequence

PEP ID

Zm00001d013095_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:4680234:4684555:-1 gene:Zm00001d013095 transcript:Zm00001d013095_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication factor C subunit 3
Sequence

MLWVDKYRPKTLDKVTVHDQVARNLRKFVSEQDCPHLLFYGPSGSGKKTLILALIKQMFG
AGAEKVKLENKTWKIDTGTRTLEIELAMLSSAHHVEMNPSDAGFQDRYVVQEIIKEMAKN
RPIDAKGRRAFKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAVRSR
CLNVRVNAPSEDQIVQVLEFIGKKENLILPAGFAARIAAQSNRNLRRAILFFETCKVQQY
PFTSNQVAPPLDWEQYVSEIATDILTEQSPKRLFDVRQKFYELLVNCIPPESILKKLLAE
LLRKLDADLKYEICRWAAHYEHKMRLGSKAIFHLEAFVAKFMSIYKEFLVATFG

Transcript Sequence

Transcript ID

Zm00001d013095_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:4680234:4684555:-1 gene:Zm00001d013095 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication factor C subunit 3
Sequence

CCGCAAAAACCCTTGTCTGCCAACTGCTGTCTCGCAAGTCGCAACGGCTGAGTGCGCGCC
CATCAGTCCCGGGTTCCCGCCACACCCCTCCCATCCCCCTCTCAATCCTGTCCCCAAATC
TCTCTCTTCTCTCTAGCGGCGAGGCGAGGCGGTGAAGACGAGCGAGCGGCGAGGATGTTG
TGGGTAGACAAGTACCGGCCGAAAACCCTAGACAAGGTCACCGTCCACGACCAGGTTGCG
CGGAACCTCAGAAAGTTCGTGTCGGAGCAGGATTGCCCGCACCTGCTGTTCTATGGGCCG
TCGGGGTCCGGGAAGAAAACCCTAATCCTCGCGCTCATCAAGCAGATGTTTGGCGCCGGC
GCGGAGAAGGTTAAGCTGGAGAATAAGACATGGAAAATTGATACTGGAACAAGGACACTT
GAGATAGAATTGGCGATGTTGTCAAGTGCTCACCATGTAGAGATGAACCCCAGTGATGCT
GGCTTTCAGGACAGGTATGTTGTCCAGGAGATCATTAAAGAGATGGCCAAGAACAGGCCA
ATTGATGCCAAAGGAAGGAGAGCATTTAAAGTCCTTGTGTTAAATGAAGTTGACAAGCTC
TCAAGAGAAGCCCAGCATTCCCTCCGTAGGACTATGGAGAAGTATAGCTCATCATGCAGA
CTGATCCTATGCTGTAACAGCTCCTCAAAAGTGACAGAGGCTGTAAGATCCCGTTGCTTA
AATGTGCGAGTAAACGCACCCAGTGAAGATCAGATTGTCCAAGTTCTAGAATTCATTGGG
AAGAAAGAAAACCTGATTCTTCCAGCTGGATTTGCTGCTCGTATCGCAGCACAATCAAAC
CGTAATCTGAGACGTGCTATACTGTTTTTTGAGACTTGCAAAGTTCAACAATACCCATTT
ACATCAAATCAAGTGGCGCCTCCTCTTGATTGGGAGCAATACGTGTCTGAAATAGCCACG
GATATACTGACAGAACAAAGCCCTAAAAGGCTATTTGATGTACGCCAGAAATTCTATGAA
TTACTCGTCAATTGTATCCCACCCGAAAGTATTTTGAAGAAGTTGCTAGCAGAGTTACTG
AGGAAGTTAGATGCTGATCTGAAATATGAAATCTGTCGCTGGGCCGCACACTACGAGCAC
AAGATGCGCCTTGGATCAAAGGCTATTTTTCATCTGGAAGCTTTCGTGGCCAAGTTCATG
AGCATTTACAAGGAGTTCCTGGTGGCTACATTTGGTTGAGCAAAACCTCGAGCTACAATT
AGGGTTGTCACGTTCTGTCAGGGGCTATCGCATTGTATCGGTATAGTTTTGTACTAATCT
CGTCAGCGACTATCCTTCTGTCAACCCGGGTGACCCCTCTGACTTCATCATAGCGTCTGC
TTGCACGTTGACGTTCGTGACGACATTATCAGACGTCATTACGCTTGGTTAACAAACAGC
CTGAAAGCGGGACAGGCTCGGAAGT