Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013093_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:5:4608681:4623665:1 gene:Zm00001d013093 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable zinc metalloprotease EGY1 chloroplastic
Sequence	ATGGCCGCTGCGCTCGCCAGCTCACCGCTTGTTCACCTATCCACCTCCCGCCTCCGCCTC CCCAGGCCCCGGGCCTCCTCCAGTTCCGCTCCAGGCTGCTCGATCGGCGTGTGCTTGGGA TGGAGGCTGAAGGTCGGGTGGAGGGCTCTGAGGCGGTGCGACCGGCTTCGATGCTTCTCC ACCGACGGCGACGGCGTGGAGGAGGGGGAGAAGCGTGGCGAGGAGGAGGCCTCGGCGACG GCGGCCCCGGCCCCGGACCCAGCCCCAGCGGAGACACAGGTGGGCGCTGCGGAGGAGCTG GCGTCTGAGCGGAGCCGATCAGGGAGCTTTTCGTCCTCATCCTCGTCCGGGAATCCTGGT GTATCAAGCGAGCCACCACTGTTGAGTTTTAGTGTTGATAATATCGATACAGTTAAACTA TTGGAACTTCTAGGCCCGGAAAAGGTTGACCCAGTTGATGTCATGGCAATTAAGGAAAAA CTCTTTGGTTATACGACATTCTGGTTGACAAAAGAAGAGCCTTTTGGTGATCTCGGTGAA GGAGTCCTTTTCATTGGGAATCTCCGTGGGAAGAGGGAGGAAATCTTTGCAAAACTTCAA AGGCAACTACGCGAACTTGCTGGTGAAAAATACAATCTTTTTATGGTGGAGGAACCCAAT TCAGAAGGGGATGACCCACGTGGGGGACCACGTGTTAGTTTTGGTTTGCTTAGGAAGGAA GTTTCTGAGCCTGGACCTACTACCCTATGGCAGTATGTCATTTCTCTGTCACTTTTCCTT CTCACTATGTTCTCCTGTGTTGAGCTAGGAATTGCATCAAAGATTAGCAGTCTTCCACCA GAAATTGTTTCATATTTCACTGATCCAAATTCTACTGGACCCCCTCCTGATATGCAACTT CTGCTCCCATTTGTGGAATCGGCTTTGCCAGTGGCTTACGGTGTCTTGGCTATCCAATTA TTTCATGAAATTGGACACTTTTTGGCAGCATTTCCAAAAAATGTGAAACTAGGCATTCCT TTCTTTATTCCGAACTTCACCCTTGGAACTTTTGGTGCAATTACTCAGTTCAAGTCCATT CTTCCGGATCGAAAGACAATGTTTGACATATCAATGGCTGGTCCTGTGGCTGGAGCTGCA CTTTCCTTTTCAATGTTCTTTGTAGGCTTATTACTCTCTTCAAATCCTGTTGGGGCAAGT GATTTAGTAGAAGTACCTAGCCAGCTGTTCCAGGGTTCATTATTGCTTGGACTCATTAGT AGAGCAACACTTGGATACAGAGCTATGCATGCTGCTACAGTTTCGATCCACCCTCTAGTG ATTGCAGGCTGGTGTGGTTTAACTACTACTGCATTTAATATGCTTCCTGTTGGATGTCTT GATGGTGGAAGAGCATTACAGGGTGCTTTTGGCAAGGATGCTTTGTTTGGATTTGGCCTC ACAACATACTCGTTGCTTGGACTAGGAGTGCTTGGAGGACCACTGTCTCTTCCTTGGGGT TTGTACGTGCTAATTTGCCAGAGAACACCGGAGAAACCATGCTTGAACGACGTAAGCGAT ATTGGAGGTTGGAGGAGGACGGCCTTGATAGCTTCAGTGTTTCTTGTTGTTTTGACTCTC ATCCCGTTGTGGGATGAACTCGCGGAGGAACTAGGTGTAGGGCTTGTTACTTCGTTCTGA

Peptide Sequence

PEP ID	Zm00001d013093_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:5:4608681:4623665:1 gene:Zm00001d013093 transcript:Zm00001d013093_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable zinc metalloprotease EGY1 chloroplastic
Sequence	MAAALASSPLVHLSTSRLRLPRPRASSSSAPGCSIGVCLGWRLKVGWRALRRCDRLRCFS TDGDGVEEGEKRGEEEASATAAPAPDPAPAETQVGAAEELASERSRSGSFSSSSSSGNPG VSSEPPLLSFSVDNIDTVKLLELLGPEKVDPVDVMAIKEKLFGYTTFWLTKEEPFGDLGE GVLFIGNLRGKREEIFAKLQRQLRELAGEKYNLFMVEEPNSEGDDPRGGPRVSFGLLRKE VSEPGPTTLWQYVISLSLFLLTMFSCVELGIASKISSLPPEIVSYFTDPNSTGPPPDMQL LLPFVESALPVAYGVLAIQLFHEIGHFLAAFPKNVKLGIPFFIPNFTLGTFGAITQFKSI LPDRKTMFDISMAGPVAGAALSFSMFFVGLLLSSNPVGASDLVEVPSQLFQGSLLLGLIS RATLGYRAMHAATVSIHPLVIAGWCGLTTTAFNMLPVGCLDGGRALQGAFGKDALFGFGL TTYSLLGLGVLGGPLSLPWGLYVLICQRTPEKPCLNDVSDIGGWRRTALIASVFLVVLTL IPLWDELAEELGVGLVTSF

Transcript Sequence

Transcript ID	Zm00001d013093_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:4608681:4623665:1 gene:Zm00001d013093 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable zinc metalloprotease EGY1 chloroplastic
Sequence	GTCGCCGGGTCGCCGTCAAACTCGCTGCCACGTCGGTCCGAACCAAATCCAGCACCCTGC ACCCTCTTCCTCCATCGCACCCTATCCTCCTCCTCCCCGGTCCGGCGGTCCCCACCGGTC CACCACGGCACCACCGTCTCCCCGCCCCCCGCGTCCGATCACCGCACCGGCGAACTCGGC GAGCCGCTCGTCGCTGCACGCTAAGCTGGGAATGGCCGCTGCGCTCGCCAGCTCACCGCT TGTTCACCTATCCACCTCCCGCCTCCGCCTCCCCAGGCCCCGGGCCTCCTCCAGTTCCGC TCCAGGCTGCTCGATCGGCGTGTGCTTGGGATGGAGGCTGAAGGTCGGGTGGAGGGCTCT GAGGCGGTGCGACCGGCTTCGATGCTTCTCCACCGACGGCGACGGCGTGGAGGAGGGGGA GAAGCGTGGCGAGGAGGAGGCCTCGGCGACGGCGGCCCCGGCCCCGGACCCAGCCCCAGC GGAGACACAGGTGGGCGCTGCGGAGGAGCTGGCGTCTGAGCGGAGCCGATCAGGGAGCTT TTCGTCCTCATCCTCGTCCGGGAATCCTGGTGTATCAAGCGAGCCACCACTGTTGAGTTT TAGTGTTGATAATATCGATACAGTTAAACTATTGGAACTTCTAGGCCCGGAAAAGGTTGA CCCAGTTGATGTCATGGCAATTAAGGAAAAACTCTTTGGTTATACGACATTCTGGTTGAC AAAAGAAGAGCCTTTTGGTGATCTCGGTGAAGGAGTCCTTTTCATTGGGAATCTCCGTGG GAAGAGGGAGGAAATCTTTGCAAAACTTCAAAGGCAACTACGCGAACTTGCTGGTGAAAA ATACAATCTTTTTATGGTGGAGGAACCCAATTCAGAAGGGGATGACCCACGTGGGGGACC ACGTGTTAGTTTTGGTTTGCTTAGGAAGGAAGTTTCTGAGCCTGGACCTACTACCCTATG GCAGTATGTCATTTCTCTGTCACTTTTCCTTCTCACTATGTTCTCCTGTGTTGAGCTAGG AATTGCATCAAAGATTAGCAGTCTTCCACCAGAAATTGTTTCATATTTCACTGATCCAAA TTCTACTGGACCCCCTCCTGATATGCAACTTCTGCTCCCATTTGTGGAATCGGCTTTGCC AGTGGCTTACGGTGTCTTGGCTATCCAATTATTTCATGAAATTGGACACTTTTTGGCAGC ATTTCCAAAAAATGTGAAACTAGGCATTCCTTTCTTTATTCCGAACTTCACCCTTGGAAC TTTTGGTGCAATTACTCAGTTCAAGTCCATTCTTCCGGATCGAAAGACAATGTTTGACAT ATCAATGGCTGGTCCTGTGGCTGGAGCTGCACTTTCCTTTTCAATGTTCTTTGTAGGCTT ATTACTCTCTTCAAATCCTGTTGGGGCAAGTGATTTAGTAGAAGTACCTAGCCAGCTGTT CCAGGGTTCATTATTGCTTGGACTCATTAGTAGAGCAACACTTGGATACAGAGCTATGCA TGCTGCTACAGTTTCGATCCACCCTCTAGTGATTGCAGGCTGGTGTGGTTTAACTACTAC TGCATTTAATATGCTTCCTGTTGGATGTCTTGATGGTGGAAGAGCATTACAGGGTGCTTT TGGCAAGGATGCTTTGTTTGGATTTGGCCTCACAACATACTCGTTGCTTGGACTAGGAGT GCTTGGAGGACCACTGTCTCTTCCTTGGGGTTTGTACGTGCTAATTTGCCAGAGAACACC GGAGAAACCATGCTTGAACGACGTAAGCGATATTGGAGGTTGGAGGAGGACGGCCTTGAT AGCTTCAGTGTTTCTTGTTGTTTTGACTCTCATCCCGTTGTGGGATGAACTCGCGGAGGA ACTAGGTGTAGGGCTTGTTACTTCGTTCTGAGATACGGTCCTTACCGATAGAATTAGGCC GTGATGTAGCTCAATTTTGTATTGAAATGTAGCGTCCCATAGCGGGACTGCTGTAAAGGC ATGTGCAGTTTCCTGATTAGGTGAGCAATGATATCACCTATGCGAGTG