Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013071_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:4310449:4311941:1 gene:Zm00001d013071 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 19 description:Auxin-responsive protein IAA4
Sequence

ATGGAGATGATCGACGCAGAGCTGCGTCTGGGTCCGCCCGGCAGCAGCAACAGAGACGTC
ATCAACGTCGTGCAGCCTTCGTTGGCGGCGGCGAAACGGCCGTCGTCGTCGGTGGTGGAG
AGCGAGGCGTCCGGGACGGACGACCATGACCATGACGACGCCGCACCGACCTCCAAGGTG
CAGGTGGTGGGGTGGCCGCCGGTGAGAGTGTACCGGAAGAACGCGTTCCACGCGGCGGCG
GAGGCGAGGAGGACCAGGCGGGGCGAGCAGCAGGGAGGAGGAGGCCTGTACGTGAAGGTG
AGCATGGACGGGGCGCCATACCTCCGGAAGGTGGACCTGCGGACCTACGGCGGCTACCGT
GAGCTGAGGGACGCGCTGGACGCGCTCTTCGGCTGCTTCTCCTCCTCGGCCGACGGCGGA
TGCCAGTTCGCCGTCGCCTACGAGGACAAGGACGGCGACCTCATGCTCGCCGGCGACGTG
CCATGGGAGATGTTCATCTGTTCTTGCAAGAAGCTCAGGATCATGAGGGGGTCCGAAGCA
AGATAA

Peptide Sequence

PEP ID

Zm00001d013071_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:4310449:4311941:1 gene:Zm00001d013071 transcript:Zm00001d013071_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 19 description:Auxin-responsive protein IAA4
Sequence

MEMIDAELRLGPPGSSNRDVINVVQPSLAAAKRPSSSVVESEASGTDDHDHDDAAPTSKV
QVVGWPPVRVYRKNAFHAAAEARRTRRGEQQGGGGLYVKVSMDGAPYLRKVDLRTYGGYR
ELRDALDALFGCFSSSADGGCQFAVAYEDKDGDLMLAGDVPWEMFICSCKKLRIMRGSEA
R

Transcript Sequence

Transcript ID

Zm00001d013071_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:4310449:4311941:1 gene:Zm00001d013071 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 19 description:Auxin-responsive protein IAA4
Sequence

AACGACGAGCAGTGCAAGCCAAGCATTCTCACGCTAGCTGTTCTCTTCTTGCCTCATCCA
TCGTGCATCTATATTCTCGGCGCGAGTTACGTCTTTTTCGTCGTCCGGCCGGCGAGCATT
TTGCTTCTGTGATCGATCGGCGCGCGCGACGTACGGCCATGGAGATGATCGACGCAGAGC
TGCGTCTGGGTCCGCCCGGCAGCAGCAACAGAGACGTCATCAACGTCGTGCAGCCTTCGT
TGGCGGCGGCGAAACGGCCGTCGTCGTCGGTGGTGGAGAGCGAGGCGTCCGGGACGGACG
ACCATGACCATGACGACGCCGCACCGACCTCCAAGGTGCAGGTGGTGGGGTGGCCGCCGG
TGAGAGTGTACCGGAAGAACGCGTTCCACGCGGCGGCGGAGGCGAGGAGGACCAGGCGGG
GCGAGCAGCAGGGAGGAGGAGGCCTGTACGTGAAGGTGAGCATGGACGGGGCGCCATACC
TCCGGAAGGTGGACCTGCGGACCTACGGCGGCTACCGTGAGCTGAGGGACGCGCTGGACG
CGCTCTTCGGCTGCTTCTCCTCCTCGGCCGACGGCGGATGCCAGTTCGCCGTCGCCTACG
AGGACAAGGACGGCGACCTCATGCTCGCCGGCGACGTGCCATGGGAGATGTTCATCTGTT
CTTGCAAGAAGCTCAGGATCATGAGGGGGTCCGAAGCAAGATAACCAAGCAACGAGGATG
CAAGGACCTGTTGTATGCATATGCATGGAGGCCGGCCGGACTCATGCTGTCATGCATGAG
AGTTTGAGAGAGGAGAAGAAGACGACCTACTGGAACTGAAGGCGGTTGGGTATACCTGCA
TGGGGAGGGAGCCCACGCATGCACGCGCGCGTCGTCGTGTTCTACGGCCAGCTAGCCACC
AGACCGGCTGCCGGCCCATATGCACACCACGGAGATGGAGGTGATGGTTCAAGGATCACG
GCGGCGTACGCGCGCGTCATCAGTCACGCCGTCCTGTCATCAGATGAGATGGAGGGGTGA
TGCATGAGGGCAGTGCTAGCTGTGGACGGCTGGCTGGACGTGCAGATCGGAGCGAGATTG
TACTGTGCACGCACATAAGCTTTGTACAGTGGCATGTGCTGGTCATCTGTAATTTTGATT
TTTTTCCCCCTCCTTTTGTAAGTGAGCAAGTTTGAGGAAAAAATGTATGAATGAAGAAAA
GGAGAGGGGGGATTTCAAATTTGAGTTAATTTCCTTTTGGCATCTCTCCTGATAACAAAA
CGTCACAAAGAAAATACCACTACTAGTATGGC