Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013060_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:5:4055844:4061559:1 gene:Zm00001d013060 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 11 description:FHA domain containing protein
Sequence	ATGCAGTTTCAGCAGTTGGACAACAATCAATGTGGTAATGGGGTGGTAGACTCAAAGGCT TTGGTGATCCCTAACCATTTCAGTGGAAGTGTGCAGGAACCTATGCCTCTCCAAATGATT GGTCAACCTGAGGGTTCTGAAGCACCAGGTGGTGCAATCTTGAGTCTTCAGCGAAGCGAC AGGCTCGCTCTTGCTGATGATAAGGATGTAAAATCAGAAGACAGGGACCCTCTCACATTT GAAGCGCATTTAGATGGTGGGATATCTGGTTTAGATCACGCTACTGAGTTTATGGACTTC CCATATTTCACTAATAGTGAAGACCTTGATATCCTGAATAGTGAAAATCTTTTGAATTCT CCAAGTGAGGGAATCCAGGAGGATTTAGACGATACTGCATTAGTTGTTCATGGGGTTAGA TCAACCATGCAAAATCTGGTTCATGCTGATGAAGCCAATATGTCCTGTGATCAAATAGAT CTTGGTGATGTGAAAAATAATGTAGATGCTTCTGGTATAATCTTATTTCCTACTTCATTA GTAGTGCCCTGTCCTGGCCTGTATGTTGAGTGCAAATTGAACACAGAAGATACTGAAATT CCTTGCAACGACGATGTTTCTACACCAACAGAGTATCCTCTTGAATGCTGTACTTCTACC TTTGGGCAGAAATCTGAGAATACTATCTATTCCGTCTCCCCTGCAATCAGCCCTCCATCA ATTGCTGAACAGCCCAACCCATCCACTTCAGAACAAAAAGAAGATTCAGTGGCTCATGAC GAAGGTGGTGTCCTAGGAGCTAAACCATCAGAAGGTGCTTTAACAGTTGGAGGCCTTTTG CCTGGTAACATTGACACAAATGATGCAAACACATGCATGCTAGCTTTGCCTTCTTTTAGC ACTGCTGGATTTGGTGAAGGATCACCTTGTAGTTTAGGACCACACGAGAGCTTTGATAAC TCTCATGGTTTGACTTTGCAAAATTCAGTTCAAGCTCCTGATCAGATGCAACACAACTCA CTTGATGGTAAACCAGAATTAGGTGACAAGGCTGCTCTACAGAACTGTATGCCATCAAAT GCACTGCCCGATTTGGATATTCAGAACACTATTGCAAATGCGCCAACACCAGCTCAAGCA GAAGAATGCCCTGACTATGAAAAAGATGTTCCAAATTACTATGATCTAGAAGCTTTGATT CTTGACCAGGATCTTATCCCGTGGGACCAAGACTCCGATTTTATGCATCCTGAAGTTACC GGATTTCCTCACCCGGAAAGCAGGAAGGCATTGATTAGATTGGAGCAAGGTGCTCGGTCT TGTATGAACAGAGCTATCATGTCGCATGGTGCCTTTGCAGTTATCTATGGATTGCACTTG AGATGCTACATAAAGGATCCTGAGAAGCAGGTTACTCTTGGAAGAGAGACAGAAGACATT AAAGTTGACATTGATTTAGGAAAAGAAGGGAGGGCAAATAAGATATCTCGCCGACAGGCG GTTATCAAGATGGATGAATCTGGGTATTTTCATATTAAGAACACTGGAAAATGTCCAATC TTTGTTAATAGCAAGGAAATACCAAGCTGCAAACGCATCAACCTAAGCTCAGACTCATTA ATCGAGATAAAGGACATGAGGTTTATTTTCCATGTAAACCAAGAGGCTGTGAGGCAGTAC ATTGATCGTGACCTGAAGCCAGAACGCTAA

Peptide Sequence

PEP ID	Zm00001d013060_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:5:4055844:4061559:1 gene:Zm00001d013060 transcript:Zm00001d013060_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 11 description:FHA domain containing protein
Sequence	MQFQQLDNNQCGNGVVDSKALVIPNHFSGSVQEPMPLQMIGQPEGSEAPGGAILSLQRSD RLALADDKDVKSEDRDPLTFEAHLDGGISGLDHATEFMDFPYFTNSEDLDILNSENLLNS PSEGIQEDLDDTALVVHGVRSTMQNLVHADEANMSCDQIDLGDVKNNVDASGIILFPTSL VVPCPGLYVECKLNTEDTEIPCNDDVSTPTEYPLECCTSTFGQKSENTIYSVSPAISPPS IAEQPNPSTSEQKEDSVAHDEGGVLGAKPSEGALTVGGLLPGNIDTNDANTCMLALPSFS TAGFGEGSPCSLGPHESFDNSHGLTLQNSVQAPDQMQHNSLDGKPELGDKAALQNCMPSN ALPDLDIQNTIANAPTPAQAEECPDYEKDVPNYYDLEALILDQDLIPWDQDSDFMHPEVT GFPHPESRKALIRLEQGARSCMNRAIMSHGAFAVIYGLHLRCYIKDPEKQVTLGRETEDI KVDIDLGKEGRANKISRRQAVIKMDESGYFHIKNTGKCPIFVNSKEIPSCKRINLSSDSL IEIKDMRFIFHVNQEAVRQYIDRDLKPER

Transcript Sequence

Transcript ID	Zm00001d013060_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:4055844:4061559:1 gene:Zm00001d013060 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 11 description:FHA domain containing protein
Sequence	GGAACAATCTTTCTCTAAAGAGTATCACAAATTTTCAGGATTCTATGCAGTTTCAGCAGT TGGACAACAATCAATGTGGTAATGGGGTGGTAGACTCAAAGGCTTTGGTGATCCCTAACC ATTTCAGTGGAAGTGTGCAGGAACCTATGCCTCTCCAAATGATTGGTCAACCTGAGGGTT CTGAAGCACCAGGTGGTGCAATCTTGAGTCTTCAGCGAAGCGACAGGCTCGCTCTTGCTG ATGATAAGGATGTAAAATCAGAAGACAGGGACCCTCTCACATTTGAAGCGCATTTAGATG GTGGGATATCTGGTTTAGATCACGCTACTGAGTTTATGGACTTCCCATATTTCACTAATA GTGAAGACCTTGATATCCTGAATAGTGAAAATCTTTTGAATTCTCCAAGTGAGGGAATCC AGGAGGATTTAGACGATACTGCATTAGTTGTTCATGGGGTTAGATCAACCATGCAAAATC TGGTTCATGCTGATGAAGCCAATATGTCCTGTGATCAAATAGATCTTGGTGATGTGAAAA ATAATGTAGATGCTTCTGGTATAATCTTATTTCCTACTTCATTAGTAGTGCCCTGTCCTG GCCTGTATGTTGAGTGCAAATTGAACACAGAAGATACTGAAATTCCTTGCAACGACGATG TTTCTACACCAACAGAGTATCCTCTTGAATGCTGTACTTCTACCTTTGGGCAGAAATCTG AGAATACTATCTATTCCGTCTCCCCTGCAATCAGCCCTCCATCAATTGCTGAACAGCCCA ACCCATCCACTTCAGAACAAAAAGAAGATTCAGTGGCTCATGACGAAGGTGGTGTCCTAG GAGCTAAACCATCAGAAGGTGCTTTAACAGTTGGAGGCCTTTTGCCTGGTAACATTGACA CAAATGATGCAAACACATGCATGCTAGCTTTGCCTTCTTTTAGCACTGCTGGATTTGGTG AAGGATCACCTTGTAGTTTAGGACCACACGAGAGCTTTGATAACTCTCATGGTTTGACTT TGCAAAATTCAGTTCAAGCTCCTGATCAGATGCAACACAACTCACTTGATGGTAAACCAG AATTAGGTGACAAGGCTGCTCTACAGAACTGTATGCCATCAAATGCACTGCCCGATTTGG ATATTCAGAACACTATTGCAAATGCGCCAACACCAGCTCAAGCAGAAGAATGCCCTGACT ATGAAAAAGATGTTCCAAATTACTATGATCTAGAAGCTTTGATTCTTGACCAGGATCTTA TCCCGTGGGACCAAGACTCCGATTTTATGCATCCTGAAGTTACCGGATTTCCTCACCCGG AAAGCAGGAAGGCATTGATTAGATTGGAGCAAGGTGCTCGGTCTTGTATGAACAGAGCTA TCATGTCGCATGGTGCCTTTGCAGTTATCTATGGATTGCACTTGAGATGCTACATAAAGG ATCCTGAGAAGCAGGTTACTCTTGGAAGAGAGACAGAAGACATTAAAGTTGACATTGATT TAGGAAAAGAAGGGAGGGCAAATAAGATATCTCGCCGACAGGCGGTTATCAAGATGGATG AATCTGGGTATTTTCATATTAAGAACACTGGAAAATGTCCAATCTTTGTTAATAGCAAGG AAATACCAAGCTGCAAACGCATCAACCTAAGCTCAGACTCATTAATCGAGATAAAGGACA TGAGGTTTATTTTCCATGTAAACCAAGAGGCTGTGAGGCAGTACATTGATCGTGACCTGA AGCCAGAACGCTAATTTCCCCTGGCTTTCCAGTCAGCAGCAGCCTGTGAGTGACTGCCTC ATTAACAGCAATAGAAGTAGCATAGCAGTAAATTTGAGTAAGCATTGCTCGTTTAGGATG TTCCTTCATATGATGTTAACAAGTTAGGTTCACTTGGCTCCGGTCTGTAAATGGTTGTAG TTTGTTGCGTTTTCTGTCTGTTTGGCGGGCATAAATCATGCATATAACCAGCGCATTTGC TTCCAGTTTGTACCTACACTCCCAGGAATGATTTCATTTGTAATACTGGCACCCTAGATT GTGGTGACTGCCGCCAAGAGCAAGAGGCAACCAATGCAATAAAGTGCGGAAAAGAATCAA TAGAAGGGTAGATTCTAGGGTAGAACAGGAGGAGGGTGCACTTGTGCAAGAAACCATTCG GTTCTTGCGACGCTATAAGCATAAACTTTATTGGTTTTTATTTATATACCCTGATGATCT