Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013048_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:5:3760798:3771009:-1 gene:Zm00001d013048 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:squalene synthase1 description:squalene synthase1
Sequence	ATGACTGCAGAGGACGACACTAGCATCCCGACCGAGGTGAAGGTGCCCATCCTCCAGGAA TTCTACCGGCACATCTACAACCGCGACTGGCATTATTCGTGTGGAACAAATCACTACAAA ATGCTAATGGATAAGTTTCGCCACGTATCCACTGCCTTCCTGGAGCTTGGTGAAGGTTAC CAAAAGGCAATAGAAGAAGTCACTAGGCGAATGGGTGCAGGAATGGCAAAATTTATATGC AAAGAGGTTGAAACTGTTGATGACTATGACGAGTATTGTCACTATGTAGCTGGGCTAGTT GGTTATGGACTTTCCAGGCTCTTCTATGCTGCTGGGACGGAAGATCTGGCTCTAGATTCA CTGTCAAATTCAATGGGCCTATTTTTACAGAAAACTAACATAATTAGGGACTATTTGGAG GACATAAATGAGATACCAAAGTCCCGCATGTTCTGGCCTCGAGAGATATGGAGTAAATAT GCAGATAAACTTGAGGACTTCAAATATGAGGAGAACTCCAAAAAAGCAGTACAATGCTTG AACAATATGGTGACTGATGCACTGATTCATGCTGAAGAGTGCCTTCAGTACATGTCAGCC TTGAAGGATCCTGCCATTTTCCGTTTTTGTGCAATACCCCAGATAATGGCAATTGGAACA TGTGCTCTTTGCTACAATAACGTGCATGTCTTCAGAGGAGTTGTGAAGATGAGACGTGGT CTCACGGCACGAATAATTGACGAGACAAACTCAATGACAGATGTCTATACTGCTTTCTAT GAGTTTTCTTCATTGATAGAGTCAAAGATTGATGACAGTGATCCAAATGCTGCTCTAACA CAGAGACGTGTGGATTCAATAAAGCAAACTTGCAAGTCATCTGGTTTGGTAAAGCAAAGG GGGTACCATTTGGAGAAGTCACCTTACAGGCCTATGCTGATCATGATTGTCCTCCTGCTG GTAGCTATTCTTTTCGGGGTAATGTTCTAG

Peptide Sequence

PEP ID	Zm00001d013048_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:5:3760798:3771009:-1 gene:Zm00001d013048 transcript:Zm00001d013048_T010 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:squalene synthase1 description:squalene synthase1
Sequence	MTAEDDTSIPTEVKVPILQEFYRHIYNRDWHYSCGTNHYKMLMDKFRHVSTAFLELGEGY QKAIEEVTRRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGYGLSRLFYAAGTEDLALDS LSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYADKLEDFKYEENSKKAVQCL NNMVTDALIHAEECLQYMSALKDPAIFRFCAIPQIMAIGTCALCYNNVHVFRGVVKMRRG LTARIIDETNSMTDVYTAFYEFSSLIESKIDDSDPNAALTQRRVDSIKQTCKSSGLVKQR GYHLEKSPYRPMLIMIVLLLVAILFGVMF

Transcript Sequence

Transcript ID	Zm00001d013048_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:3760798:3771009:-1 gene:Zm00001d013048 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:squalene synthase1 description:squalene synthase1
Sequence	ACGAGCCGCATCGCATCCATACTCCACTGCATCTGCCATCTTGGGGAACTCTTTGGCCTC TGGAACCGGCCTGCCCAGCCGCTCGATCGACGTTCGGCGAGGAGGCTGATCCGGTCTGTT GGATCGGAGGCGCGGCGATGGGGGCGCTGTCGCGGCCGGAGGAGGTGCTGGCGCTGGTAA AGCTGCGGGTGGCGGCGGGGCAGATCAAGCGCCAGATCCCGCCCGAGGAGCACTGGGCCT TCGCCTACTCCATGCTCCAGAAGGTGTCCCGTAGCTTCGCTCTCGTCATCCAGCAGCTCG GACCCGAACTCCGCAATGCCGTGTGCATCTTCTACCTCGTGCTCCGTGCCCTCGACACCG TTGGGGGTAAACAAACAGGCCCTAAGTAACCAATGTTGAATGACTGCAGAGGACGACACT AGCATCCCGACCGAGGTGAAGGTGCCCATCCTCCAGGAATTCTACCGGCACATCTACAAC CGCGACTGGCATTATTCGTGTGGAACAAATCACTACAAAATGCTAATGGATAAGTTTCGC CACGTATCCACTGCCTTCCTGGAGCTTGGTGAAGGTTACCAAAAGGCAATAGAAGAAGTC ACTAGGCGAATGGGTGCAGGAATGGCAAAATTTATATGCAAAGAGGTTGAAACTGTTGAT GACTATGACGAGTATTGTCACTATGTAGCTGGGCTAGTTGGTTATGGACTTTCCAGGCTC TTCTATGCTGCTGGGACGGAAGATCTGGCTCTAGATTCACTGTCAAATTCAATGGGCCTA TTTTTACAGAAAACTAACATAATTAGGGACTATTTGGAGGACATAAATGAGATACCAAAG TCCCGCATGTTCTGGCCTCGAGAGATATGGAGTAAATATGCAGATAAACTTGAGGACTTC AAATATGAGGAGAACTCCAAAAAAGCAGTACAATGCTTGAACAATATGGTGACTGATGCA CTGATTCATGCTGAAGAGTGCCTTCAGTACATGTCAGCCTTGAAGGATCCTGCCATTTTC CGTTTTTGTGCAATACCCCAGATAATGGCAATTGGAACATGTGCTCTTTGCTACAATAAC GTGCATGTCTTCAGAGGAGTTGTGAAGATGAGACGTGGTCTCACGGCACGAATAATTGAC GAGACAAACTCAATGACAGATGTCTATACTGCTTTCTATGAGTTTTCTTCATTGATAGAG TCAAAGATTGATGACAGTGATCCAAATGCTGCTCTAACACAGAGACGTGTGGATTCAATA AAGCAAACTTGCAAGTCATCTGGTTTGGTAAAGCAAAGGGGGTACCATTTGGAGAAGTCA CCTTACAGGCCTATGCTGATCATGATTGTCCTCCTGCTGGTAGCTATTCTTTTCGGGGTA ATGTTCTAGCTGGCCCTTTCTTTTCCGCGATGGAGACTTGAGAGAAACTATGCCAATCAG GTAC