Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013040_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:5:3609461:3612670:1 gene:Zm00001d013040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine proteinases superfamily protein
Sequence	ATGGAGGAAACCCTAGCCGTCGAATCCGCCGCCGGCGAGACGGCGGCCGCGCAGGCGCCC GAGCTGAACGAAGAGACGCTCGAGGAGGTGCTCTCGAGGCATAGAAAAGAGAAATCGAAA CTCCAGGATAAGGAAACGAGCCTCAAGAAAGCTGCTGCAAAAGGAAGCAAAGCTGAGCAG AAGGCGAAGAAAAAGCAGGTAGAGGAAGAGATCACACGCCTCTCATCTGAGTTAGAGGCG AACCATGCTGCAGAGCTTGCTTCCTTTGGGTACAAACCCTCTGGTAGCTCAGAGAAGGGA AACCTCGACAACTTAGTGAAGGCCATAGCCGGTGTTTCAGTTTCCAGCAATTCGGATTCA GCAAAGCTCAGCAAGGGAGCACGCCGGCGAGAGAAGAAGGCGAAGGAGGAAGCTGCCCGA GAGCAGCGGATCCAAGAGGAACAAAGCAATCTCGTGAGCGACCGCATGCTAGAAAACGAG AAGCTCGAAAGGAAGCTCGAGCCCTTGGGGCTGACCGTCCAAGAGATAAAGCCGGACGGG CACTGCCTGTACCGAGCAGTTGAAAACCAGCTGTCGCTCCACTCCAATGGCGCTGCACGG TACAGTTACCAGGACCTACGGCAGATGACGGCCAAGTACATGAGGGAGCACGCCGCCAAT TTCCTTCCCTTCTACTTAGCGGAAGGCAAGGCCGATGTTGGACCAGATCCCATGGCGAGC TTCGAGAGGTACTGCGAGGAGATGGAGTCCACCGCAGCTTGGGGCGGGCAGCTCGAACTC GGCGCGCTGACCCACTGCCTGAAGAAACATATCGTCGTCTACTCAGGCTCCTTCCCGGAC GTGGAGATGGGTAAGGAGTACAAATCTGGACCTGGAGGTAGTGGCGCCGGCGGTGCGAGC ATCAGGCTGTCGTTCCACAGGCACGCCTATGGTCTCGGCGAGCACTACAACTCGGTGGTT CCAGCCGGATCATCCTAG

Peptide Sequence

PEP ID	Zm00001d013040_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:5:3609461:3612670:1 gene:Zm00001d013040 transcript:Zm00001d013040_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine proteinases superfamily protein
Sequence	MEETLAVESAAGETAAAQAPELNEETLEEVLSRHRKEKSKLQDKETSLKKAAAKGSKAEQ KAKKKQVEEEITRLSSELEANHAAELASFGYKPSGSSEKGNLDNLVKAIAGVSVSSNSDS AKLSKGARRREKKAKEEAAREQRIQEEQSNLVSDRMLENEKLERKLEPLGLTVQEIKPDG HCLYRAVENQLSLHSNGAARYSYQDLRQMTAKYMREHAANFLPFYLAEGKADVGPDPMAS FERYCEEMESTAAWGGQLELGALTHCLKKHIVVYSGSFPDVEMGKEYKSGPGGSGAGGAS IRLSFHRHAYGLGEHYNSVVPAGSS

Transcript Sequence

Transcript ID	Zm00001d013040_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:3609461:3612670:1 gene:Zm00001d013040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine proteinases superfamily protein
Sequence	ATAGCGCTTCTATTCTCCCCCGCCCACCGCGGCACCGCCGCCGACTCCGATCTCGGTCGA CCTACCCAGTCCGCCACCGTCTACCGCCGCCCCCACGACGATCCAGTCTCTGTCGCTGCC CCGCCTCCCCTCCTCTTCCCGCTGCCTCTCTCGGTCTCCCTGCCCCGCGCGCAACCGGAT CCAGGTGACTCCGGCCTGGACACGTCACCAGACTTCCTCTCCGCCGTCTGATCGGGTTAG CAAAAGGAAAACCGGCCTGCTTCGCGAGGATAAGAAAAGGTAGCAATAGCACGGGTAAGT AAAAACGAGCTGTAGCTGTCTGCCGGTCGGTCTGTCCGGTCCATCCCCGAGACCCGACTG CGTTCCTTCTCCTTGTCGATGGAGGAAACCCTAGCCGTCGAATCCGCCGCCGGCGAGACG GCGGCCGCGCAGGCGCCCGAGCTGAACGAAGAGACGCTCGAGGAGGTGCTCTCGAGGCAT AGAAAAGAGAAATCGAAACTCCAGGATAAGGAAACGAGCCTCAAGAAAGCTGCTGCAAAA GGAAGCAAAGCTGAGCAGAAGGCGAAGAAAAAGCAGGTAGAGGAAGAGATCACACGCCTC TCATCTGAGTTAGAGGCGAACCATGCTGCAGAGCTTGCTTCCTTTGGGTACAAACCCTCT GGTAGCTCAGAGAAGGGAAACCTCGACAACTTAGTGAAGGCCATAGCCGGTGTTTCAGTT TCCAGCAATTCGGATTCAGCAAAGCTCAGCAAGGGAGCACGCCGGCGAGAGAAGAAGGCG AAGGAGGAAGCTGCCCGAGAGCAGCGGATCCAAGAGGAACAAAGCAATCTCGTGAGCGAC CGCATGCTAGAAAACGAGAAGCTCGAAAGGAAGCTCGAGCCCTTGGGGCTGACCGTCCAA GAGATAAAGCCGGACGGGCACTGCCTGTACCGAGCAGTTGAAAACCAGCTGTCGCTCCAC TCCAATGGCGCTGCACGGTACAGTTACCAGGACCTACGGCAGATGACGGCCAAGTACATG AGGGAGCACGCCGCCAATTTCCTTCCCTTCTACTTAGCGGAAGGCAAGGCCGATGTTGGA CCAGATCCCATGGCGAGCTTCGAGAGGTACTGCGAGGAGATGGAGTCCACCGCAGCTTGG GGCGGGCAGCTCGAACTCGGCGCGCTGACCCACTGCCTGAAGAAACATATCGTCGTCTAC TCAGGCTCCTTCCCGGACGTGGAGATGGGTAAGGAGTACAAATCTGGACCTGGAGGTAGT GGCGCCGGCGGTGCGAGCATCAGGCTGTCGTTCCACAGGCACGCCTATGGTCTCGGCGAG CACTACAACTCGGTGGTTCCAGCCGGATCATCCTAGCAAGAGAAAGGTGGATGCTCTGAT GGCCTCTAATACTTCTTGATTTGATTGTTTACGGGTGGCACTTGTCTGAGTCTGAAACAC AATAGGCCACTTTTCTTTTTCCCAGTTGCTGTAATCCCTGTCATGAGTAGATGAAGGTTG AGTGTACCAATCAAAGCTGTACCGGGGAGTTTGTTTCCCAAACAATTTTGCTCTCATCAG TTTTATGTCTGTGGTTTGATTTGAA