Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013032_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:3489366:3491526:1 gene:Zm00001d013032 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase QRT2
Sequence	ATGCATTCGTCCTTATTATTACTATTAGCTATGCCGACAACAATGGTGGTGGCGGCGGCG GCGGCCCGTACAGATAAGCCGCGGCTTATGTGGTTGCCGCCTCTCGTCGTCGCGCTGCTC TTGCTGTCCGGCGCCCTACTAGAGGCTGCCGCCGCCGCTGCGGGCACGAGCACCACCTCG GCCGATGACGCCGCGAGCTCGACCAGCTCCTTGGCCGCCGAACGAGCCGCCACGGGCCGC CGCAGCAGGTTGCTGGTGGCGTCGCAGAGCACGTTCTTCAGCCTGGACAGCTACGGCGCC CGCGGCGACGGGAGGCACGACGACACCCAGGCGCTGGCCAGGGCGTGGGAGGCGGCCTGC TTCTCGCCGCGGCCGGCCGTCCTGCTCGTCCCCGGCGGCAAGCGCTACCTGCTGAAGCTC GTCGCGCTCTCCGGCCCGTGCAAGTCCAGCGTCACGGTGACGGTGGAGGGCACCCTGGTG GCGTCGCGGGACCGGTCCGACTGGATTGGCGGCGGCGGCGGCACTGACCGGCGGCGCCAC TGGATCGTGTTCCGTCAGGTCGACGGTCTCACCGTCGGCGGCGGGGGCGCCGTCGACGGC AGCGGCGAGACGTGGTGGAAGCACTCGTGCAAGATCAATAAGGATCTCCCATGCGAGGAG GCGCCGACGGCGCTGTCGTTCCACTACTGCACGAGCTTGAGGGTGCATGACCTGAAGATC GTCGACAGCCAGCAGATCCACGTGTCCATCGAGGATTGCACCGGCGTGCAGTTGACAGGC CTGTCGATCACGGCGCCCGGCACCAGTCCCAACACCGACGGCATCCACATCACACGCAGC AGGGATGTGCAGGTCACCAACTGCAAGATCAAGACTGGTGACGATTGCTTGTCCATCGAG GCAGGGACGCACGACCTCCACGTGTCGCAAATCGTGTGCGGGCCAGGTCACGGGATCAGC ATCGGGAGCCTAGGAGACGACAACTCGAGAGCCGAAGTCTCCGGCATCACCATAGACACG GTGCAGCTGTACGGCACGACCAACGGAGCGCGCATCAAGACGTACCAGGGCGGAAGCGGG TACGCCAGGGACATCACGTTCCAGAACATGGCCATGCACGGCGTCGAGAACCCGATCGTC ATCGACCAGGACTACTGCGACAAGCGCCAGGCTACGTCACCGCCGTGCGAGGCGCAGGGG TCGTCGTCGTCGTCAGCGGTCGAGGTCAGCGACGTCGCGTTCAGGAACATCCGGGGCACC ACCGTCAGCAAGGACGCCATCAAGCTGAGCTGCAGCTGGAACGTCCCCTGCCATGGCATT ACCCTGCAGAACATTAGCTTGGAGATGCTGGGCGGCAAGGGTACGGCGGAGAGCACCTGC CGGAACGCGAGGTGGAGAACGTCCGGGACGGTTCTTCCGCAGCCGTGCACCTCATTCATA GACCTGGGGCACGGTTCCAACTGA

Peptide Sequence

PEP ID	Zm00001d013032_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:3489366:3491526:1 gene:Zm00001d013032 transcript:Zm00001d013032_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase QRT2
Sequence	MHSSLLLLLAMPTTMVVAAAAARTDKPRLMWLPPLVVALLLLSGALLEAAAAAAGTSTTS ADDAASSTSSLAAERAATGRRSRLLVASQSTFFSLDSYGARGDGRHDDTQALARAWEAAC FSPRPAVLLVPGGKRYLLKLVALSGPCKSSVTVTVEGTLVASRDRSDWIGGGGGTDRRRH WIVFRQVDGLTVGGGGAVDGSGETWWKHSCKINKDLPCEEAPTALSFHYCTSLRVHDLKI VDSQQIHVSIEDCTGVQLTGLSITAPGTSPNTDGIHITRSRDVQVTNCKIKTGDDCLSIE AGTHDLHVSQIVCGPGHGISIGSLGDDNSRAEVSGITIDTVQLYGTTNGARIKTYQGGSG YARDITFQNMAMHGVENPIVIDQDYCDKRQATSPPCEAQGSSSSSAVEVSDVAFRNIRGT TVSKDAIKLSCSWNVPCHGITLQNISLEMLGGKGTAESTCRNARWRTSGTVLPQPCTSFI DLGHGSN

Transcript Sequence

Transcript ID	Zm00001d013032_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:3489366:3491526:1 gene:Zm00001d013032 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase QRT2
Sequence	CATTCTTCTTCACACACGCAACAGCCAGCGTGCACAACCCCTCTCGAACGATCCGTTCCC CCTCTCGTCGCGCCTCCAGCTCCAAGAATCCAGGCTCCAGCAGCGAGTAGCAGCCCGTGA GCTGAGGCTGATCCATGCTCCACATCCAATCACACACACACACACACACACATCAAGCCC GGCAAGCAAAGCAATTCATTCGGGCTGGCATTTTTCATCAAGTCTCCTGTCGTCGTCGAC GACCTTGCTACTAGCTCATATATAACCAGGCCGATACTAAGCTGCTAAGCGTATAGAGTT AACCTGTCGCCGATCCTGCATGCATTCGTCCTTATTATTACTATTAGCTATGCCGACAAC AATGGTGGTGGCGGCGGCGGCGGCCCGTACAGATAAGCCGCGGCTTATGTGGTTGCCGCC TCTCGTCGTCGCGCTGCTCTTGCTGTCCGGCGCCCTACTAGAGGCTGCCGCCGCCGCTGC GGGCACGAGCACCACCTCGGCCGATGACGCCGCGAGCTCGACCAGCTCCTTGGCCGCCGA ACGAGCCGCCACGGGCCGCCGCAGCAGGTTGCTGGTGGCGTCGCAGAGCACGTTCTTCAG CCTGGACAGCTACGGCGCCCGCGGCGACGGGAGGCACGACGACACCCAGGCGCTGGCCAG GGCGTGGGAGGCGGCCTGCTTCTCGCCGCGGCCGGCCGTCCTGCTCGTCCCCGGCGGCAA GCGCTACCTGCTGAAGCTCGTCGCGCTCTCCGGCCCGTGCAAGTCCAGCGTCACGGTGAC GGTGGAGGGCACCCTGGTGGCGTCGCGGGACCGGTCCGACTGGATTGGCGGCGGCGGCGG CACTGACCGGCGGCGCCACTGGATCGTGTTCCGTCAGGTCGACGGTCTCACCGTCGGCGG CGGGGGCGCCGTCGACGGCAGCGGCGAGACGTGGTGGAAGCACTCGTGCAAGATCAATAA GGATCTCCCATGCGAGGAGGCGCCGACGGCGCTGTCGTTCCACTACTGCACGAGCTTGAG GGTGCATGACCTGAAGATCGTCGACAGCCAGCAGATCCACGTGTCCATCGAGGATTGCAC CGGCGTGCAGTTGACAGGCCTGTCGATCACGGCGCCCGGCACCAGTCCCAACACCGACGG CATCCACATCACACGCAGCAGGGATGTGCAGGTCACCAACTGCAAGATCAAGACTGGTGA CGATTGCTTGTCCATCGAGGCAGGGACGCACGACCTCCACGTGTCGCAAATCGTGTGCGG GCCAGGTCACGGGATCAGCATCGGGAGCCTAGGAGACGACAACTCGAGAGCCGAAGTCTC CGGCATCACCATAGACACGGTGCAGCTGTACGGCACGACCAACGGAGCGCGCATCAAGAC GTACCAGGGCGGAAGCGGGTACGCCAGGGACATCACGTTCCAGAACATGGCCATGCACGG CGTCGAGAACCCGATCGTCATCGACCAGGACTACTGCGACAAGCGCCAGGCTACGTCACC GCCGTGCGAGGCGCAGGGGTCGTCGTCGTCGTCAGCGGTCGAGGTCAGCGACGTCGCGTT CAGGAACATCCGGGGCACCACCGTCAGCAAGGACGCCATCAAGCTGAGCTGCAGCTGGAA CGTCCCCTGCCATGGCATTACCCTGCAGAACATTAGCTTGGAGATGCTGGGCGGCAAGGG TACGGCGGAGAGCACCTGCCGGAACGCGAGGTGGAGAACGTCCGGGACGGTTCTTCCGCA GCCGTGCACCTCATTCATAGACCTGGGGCACGGTTCCAACTGAGCAGATTTGTTCGGAGA AGCAGCATGCGCGACATAGTGTGTGTGTATATTACACAGTATAGGGTATCTCAATGAATC GATTTCTGGTTACAGGAGATAAATTAGGGTGTGTTTGGTTGTAATGACAGAACAAGATAG GATATGATGATCGATTAAATAAGGTTCTTTGGGTTAAGTACGTCAG