Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013027_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:5:3457051:3461537:1 gene:Zm00001d013027 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 55
Sequence	ATGCTGGCGAGCTACGGAGGTGGTGGCCGCGGTGTCCATCTCTCCTCCCACAAGGACATC CTCCTCGGCCGCGGCGGCCGGAGCTTCCTCTTGGGCAACACGTGGTTTCTCCTCTCCACC TACCCGGCGCGCCTCCTGCACACCACGGACCGCCGCGCGCCCGCCGCTTTCTTGGCCGTG ATCAACCGGCCCCCCTGCATGCGGCCGCACCGCGCTGGGCAGGGCCTGCTGCAGAGGGGT GGTATTGTCATGGCTGCTTGCGGCTATGCTCTTGGGCGAGCTGAGCTGGGTGCTGCCAAG CGCCAGCAGCCGGATAAGGATCCATCTGCAGGGACGCGCTCCTCGAATGTTGCAGCCACG GGATCACTGGGCAGTGCAGCACGGCCAGACGTCTCTTTTAGGTACAGAGGGGCGGATTCT TGTAAGAAGGTAGCTGCAAGCTTGAAGTCGTCTGAGCCATGGGGGAACAGGGCATTCTGG ACAAACGCCGCTGGGCCAGGTTGGAAGTTGAGCTTTGCTGTTGAGCCATGGACCAAGGGC TTTAGCACGTCGTGTGCGGCGCCATATTCTGCTGGAGCCACAGAGCATCAATTATCGCTC GATGAGAAGGTGGATAACTCCACCGTTGCATCTGATTCTGATGGGAAGTCACCAGTTTCT GAAAAATTGAAGTTTCTCTCTGGTTCATGTTACTTGCCTCACCCTGATAAGGAGGCTACT GGTGGTGAGGATGCACATTTCATTAGCATTGATGAGCATGTGATTGGTGTAGCAGATGGT GTTGGTGGTTGGGCAGATGTTGGTATCGATGCTGGACTATATGCCAAGGAGCTAATGAGA AATTCAATGAGTGCAATCAAAGATGAGCCAGAAGGGACCATCGATCCAACCAGAGTTTTG GAAAAGGCTTATATGAGCACCAAAGCAAGGGGATCATCCACTGCATGTATCATCACTCTT AAAGATCAGGGTATCCATGCTGTAAATCTTGGGGACAGTGGTTTCGTAGTAGTCCGAGAC GGTCGAACTGTTCTCAGGTCACCCTCACAGCAGCATGATTTCAACCTCACTTATCAGCTT GAGAGTGGAGGTGGCAGTGATCTTCCTAGTTCTGCACAAGTATTTCACTTCCCGGTTGCC CCCGGTGATGTTATTGTTGCTGGCACGGACGGACTTTTTGACAATCTATACAACAATGAG ATAAGTGGTGTTATCGTTGAAGCGCTCAGGGTTGGACTTGAACCTCAAGTTGCGGCACAA AAAATTGCTGCCCTGGCTCGACAAAGAGCCACAGACAAAAATAGGCAGTCACCATTTGCA TCGGCCGCCCAAGAAGCTGGGTACCGGTACTACGGTGGGAAGCTCGACGACATAACGGTT GTGGTGTCGTATGTGAAAAGCGCTTGA

Peptide Sequence

PEP ID	Zm00001d013027_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:5:3457051:3461537:1 gene:Zm00001d013027 transcript:Zm00001d013027_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 55
Sequence	MLASYGGGGRGVHLSSHKDILLGRGGRSFLLGNTWFLLSTYPARLLHTTDRRAPAAFLAV INRPPCMRPHRAGQGLLQRGGIVMAACGYALGRAELGAAKRQQPDKDPSAGTRSSNVAAT GSLGSAARPDVSFRYRGADSCKKVAASLKSSEPWGNRAFWTNAAGPGWKLSFAVEPWTKG FSTSCAAPYSAGATEHQLSLDEKVDNSTVASDSDGKSPVSEKLKFLSGSCYLPHPDKEAT GGEDAHFISIDEHVIGVADGVGGWADVGIDAGLYAKELMRNSMSAIKDEPEGTIDPTRVL EKAYMSTKARGSSTACIITLKDQGIHAVNLGDSGFVVVRDGRTVLRSPSQQHDFNLTYQL ESGGGSDLPSSAQVFHFPVAPGDVIVAGTDGLFDNLYNNEISGVIVEALRVGLEPQVAAQ KIAALARQRATDKNRQSPFASAAQEAGYRYYGGKLDDITVVVSYVKSA

Transcript Sequence

Transcript ID	Zm00001d013027_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:3457051:3461537:1 gene:Zm00001d013027 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 55
Sequence	CTAATAGTAATCACATTGTCCTCGTCGTCGTCCTATCTTCTCTTGCTCTTCTCCTCCGGC CTCCTCGGTCCTTGCTCACCCGAACCAGCAACCCTAATCCGTGGCCGCGGACCCGCCGCA AGCTCCATCGCGCGAATAGATTGGGGATTCAGTCGAGGCTACGCGGGAACTGGTCGCGCT CGAGATCTTAGCCTCCGCACCTGAAACCATTGGCTCCATTGCTATTGCTGTCGTGGTTCA GGTGATGAAATCTTGGGGAGCGCGCCTCGCTCGGTCCTAAGATGCTGGCGAGCTACGGAG GTGGTGGCCGCGGTGTCCATCTCTCCTCCCACAAGGACATCCTCCTCGGCCGCGGCGGCC GGAGCTTCCTCTTGGGCAACACGTGGTTTCTCCTCTCCACCTACCCGGCGCGCCTCCTGC ACACCACGGACCGCCGCGCGCCCGCCGCTTTCTTGGCCGTGATCAACCGGCCCCCCTGCA TGCGGCCGCACCGCGCTGGGCAGGGCCTGCTGCAGAGGGGTGGTATTGTCATGGCTGCTT GCGGCTATGCTCTTGGGCGAGCTGAGCTGGGTGCTGCCAAGCGCCAGCAGCCGGATAAGG ATCCATCTGCAGGGACGCGCTCCTCGAATGTTGCAGCCACGGGATCACTGGGCAGTGCAG CACGGCCAGACGTCTCTTTTAGGTACAGAGGGGCGGATTCTTGTAAGAAGGTAGCTGCAA GCTTGAAGTCGTCTGAGCCATGGGGGAACAGGGCATTCTGGACAAACGCCGCTGGGCCAG GTTGGAAGTTGAGCTTTGCTGTTGAGCCATGGACCAAGGGCTTTAGCACGTCGTGTGCGG CGCCATATTCTGCTGGAGCCACAGAGCATCAATTATCGCTCGATGAGAAGGTGGATAACT CCACCGTTGCATCTGATTCTGATGGGAAGTCACCAGTTTCTGAAAAATTGAAGTTTCTCT CTGGTTCATGTTACTTGCCTCACCCTGATAAGGAGGCTACTGGTGGTGAGGATGCACATT TCATTAGCATTGATGAGCATGTGATTGGTGTAGCAGATGGTGTTGGTGGTTGGGCAGATG TTGGTATCGATGCTGGACTATATGCCAAGGAGCTAATGAGAAATTCAATGAGTGCAATCA AAGATGAGCCAGAAGGGACCATCGATCCAACCAGAGTTTTGGAAAAGGCTTATATGAGCA CCAAAGCAAGGGGATCATCCACTGCATGTATCATCACTCTTAAAGATCAGGGTATCCATG CTGTAAATCTTGGGGACAGTGGTTTCGTAGTAGTCCGAGACGGTCGAACTGTTCTCAGGT CACCCTCACAGCAGCATGATTTCAACCTCACTTATCAGCTTGAGAGTGGAGGTGGCAGTG ATCTTCCTAGTTCTGCACAAGTATTTCACTTCCCGGTTGCCCCCGGTGATGTTATTGTTG CTGGCACGGACGGACTTTTTGACAATCTATACAACAATGAGATAAGTGGTGTTATCGTTG AAGCGCTCAGGGTTGGACTTGAACCTCAAGTTGCGGCACAAAAAATTGCTGCCCTGGCTC GACAAAGAGCCACAGACAAAAATAGGCAGTCACCATTTGCATCGGCCGCCCAAGAAGCTG GGTACCGGTACTACGGTGGGAAGCTCGACGACATAACGGTTGTGGTGTCGTATGTGAAAA GCGCTTGATTCGAGCCTTTCTTTTTATTAGATGTAATGTCAAAATCTTAGTCCCGAATTT AATGGCACATGTGTTCTCAAGGTGTGAAATCCCCTGAGATACTAGAAGCACTCCTGCTGG GTTTAGCCCTGGAATACGTTAGCAAACCATTACACCATTTTACTTGTTTGCCACTGTGAG TAATCTTCTTTTTATATATAATTCTCTAAAACCAGGGCGGTCGTTTCGCCCTTGGAGTTG GAGGGGGAGGATAATGACCTGCTGGAACCAAATTTTGTTGTAAATATTGTCGATTG