Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013015_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:3231407:3232992:-1 gene:Zm00001d013015 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:short chain alcohol dehydrogenase1 description: short chain alcohol dehydrogenase1
Sequence

ATGGAGCACGGCGCCAAGGTCTGCATCGCGGACATCCAGGATGAGGCTGGGCAGCAGCTG
CGCGACGCCCTGGGAGGTGACGCGCAGGGCGCCATGTTCGTCCACTGCGACGTGACGTCG
GAGGAGGACGTGAGCCGCGCCGTGGACGCTGCGGCGGAGCGGTTCGGCGCGCTGGACGTG
ATGGTGAACAACGCCGGCGTGACGGGCACCAAGGTGACGGACATCCGCAACGTGGACTTC
GCGGAGGCGCGCAGGGTGCTCGACGTCAACGTGCACGGCGTGTTCCTGGGGATGAAGCAC
GCGGCGCGCGCTATGATCCCGCGGAAGCGGGGCTCCATCGTGTCGCTGGCCAGCGTGGCC
AGCGCCATCGGCGGGACGGGCCCGCACGTCTACACGGCGTCCAAGCACGCCGTGGTCGGG
CTCACCAAGAGCGTCGCCGCGGAGCTCGGCCGCCACGGGGTGCGCGTCAACTGCGTGTCC
CCCTATGCCGTGCCCACGGCGCTGTCGATGCCGCACCTGCCCCAGGGCGCGCGCGCAGAT
GACGCGCTCAAGGACTTCCTGGCCTTTGTCGGCGGCGAGGCCAACCTCAAGGGCGTCGAC
GCCATGCCCGAGGACGTCGCCCAGGCGGTGCTCTACCTGGCCAGCGACGAGGCGAGGTAC
GTCAGCGCGGTCAACCTCATGGTGGACGGAGGCTTCACAGCCGTAAACAATAACCTCAGG
GCGTTTGAGGATTAG

Peptide Sequence

PEP ID

Zm00001d013015_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:3231407:3232992:-1 gene:Zm00001d013015 transcript:Zm00001d013015_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:short chain alcohol dehydrogenase1 description: short chain alcohol dehydrogenase1
Sequence

MEHGAKVCIADIQDEAGQQLRDALGGDAQGAMFVHCDVTSEEDVSRAVDAAAERFGALDV
MVNNAGVTGTKVTDIRNVDFAEARRVLDVNVHGVFLGMKHAARAMIPRKRGSIVSLASVA
SAIGGTGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARAD
DALKDFLAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLR
AFED

Transcript Sequence

Transcript ID

Zm00001d013015_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:3231407:3232992:-1 gene:Zm00001d013015 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:short chain alcohol dehydrogenase1 description: short chain alcohol dehydrogenase1
Sequence

AACGACAGCGCGCACTTGGATTCGGCGACCACCGGAGCGCGGAGGAGGCACAGGCGCCGA
TCTAAAGACGATGGCCGCCGCGGGCTCCTCGCCGTCCTTCTCCTCCTCGAGGCGATGAAT
TGAAGGATCCACCCAGGCCAAGCACTGGTGCTCTGTGCTTATCTTTTAGCGAGCGAAGTG
GTCATTTCCCCCTCTCTTCTTTATGGGAGGAAAATAGGAAATGGTGTGCCAAGTGTATCC
TCAACCATTCTACTGTTCCAAACGTGCAGTATACATCGGCATACAGTCGATCCAGTTGCA
ACACCATAGCTGGAAGGGAAGGTGGCCCTCGTCACTGGTGGCGCCACCGGCATCGGTGAG
GCCATCGTTCGCCTCTTCATGGAGCACGGCGCCAAGGTCTGCATCGCGGACATCCAGGAT
GAGGCTGGGCAGCAGCTGCGCGACGCCCTGGGAGGTGACGCGCAGGGCGCCATGTTCGTC
CACTGCGACGTGACGTCGGAGGAGGACGTGAGCCGCGCCGTGGACGCTGCGGCGGAGCGG
TTCGGCGCGCTGGACGTGATGGTGAACAACGCCGGCGTGACGGGCACCAAGGTGACGGAC
ATCCGCAACGTGGACTTCGCGGAGGCGCGCAGGGTGCTCGACGTCAACGTGCACGGCGTG
TTCCTGGGGATGAAGCACGCGGCGCGCGCTATGATCCCGCGGAAGCGGGGCTCCATCGTG
TCGCTGGCCAGCGTGGCCAGCGCCATCGGCGGGACGGGCCCGCACGTCTACACGGCGTCC
AAGCACGCCGTGGTCGGGCTCACCAAGAGCGTCGCCGCGGAGCTCGGCCGCCACGGGGTG
CGCGTCAACTGCGTGTCCCCCTATGCCGTGCCCACGGCGCTGTCGATGCCGCACCTGCCC
CAGGGCGCGCGCGCAGATGACGCGCTCAAGGACTTCCTGGCCTTTGTCGGCGGCGAGGCC
AACCTCAAGGGCGTCGACGCCATGCCCGAGGACGTCGCCCAGGCGGTGCTCTACCTGGCC
AGCGACGAGGCGAGGTACGTCAGCGCGGTCAACCTCATGGTGGACGGAGGCTTCACAGCC
GTAAACAATAACCTCAGGGCGTTTGAGGATTAGTTGAGGCATTTATGCCAGCTCTGGGAT
TGGGAGGGAGTATTACCGCTATTTCTTCTGCTGTTGTGACAAGTGTGTGCAAGACTAATA
AACCGCAGCATGTTCATGTAGCCAACAGATGATTGAACATTCCAAGTATCATTGCTGAAT
TCACGCATATAGTTGCTCTTCAAATAG