Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013013_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:5:3206732:3213890:-1 gene:Zm00001d013013 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mg chelataseD1 description:Magnesium-chelatase subunit ChlD chloroplastic
Sequence	ATGGCGACGCCCACCGCGCTCTCCACCTCACTCCCCTACCTCCCGCCCCGCCGCGTCATC TCATTCCCATCCGCCGCCGCCGTCTCCCTCCCCGTCACCTCCCGCCCCGCCCGGCTGCGG GATTCCCGCCTCGCGGCCGCGGCAACCTCGGCCTCCGAGGTCCTCGAGTCCACCAACGGC GCCGTCCCCACTGCGGCCAAGGACGGCGCGTGGCGCGGGTATGGGAGGGAGTACTTCCCC CTGGCTGCCGTCGTTGGGCAGGATGCTATCAAAACTGCTCTGCTGCTTGGGGCGATTGAT CGTGAGATCGGAGGCATTGCCATCTCAGGGAAGCGTGGGACGGCAAAGACAGTGATGGCT CGTGGTTTGCATGCTATGCTTCCACCCATTGAAGTGGTGGTTGGTTCCATTGCAAATGCT GACCCTAACTCCCCTGACGAATGGGAGGATGGTTTAGCTGATCAAATACAGTATGACTCT GATGGTAATGTCAAATCCGAGATTGTCAAAACACCTTTTGTGCAGATTCCACTTGGTGTG ACGGAGGATAGGCTCATTGGATCAGTTGATGTTGAAGCATCTGTGAGATCAGGGACTACT GTATTTCAACCTGGTCTTCTTGCTGAAGCACATAGAGGTGTTCTTTATGTTGATGAAATA AATCTATTGGATGATGGCATAAGCAATCTACTTCTGAATGTCTTGACGGAGGGAGTTAAC ATTGTGGAAAGAGAGGGCATTAGCTTTCGCCATCCCTGCAAACCACTTCTAATTGCTACT TACAATCCAGAGGAAGGGTCTGTACGTGAACACTTGCTTGATCGTATTGCAATTAATTTA AGTGCTGATCTTCCAATGAGTTTTGATGACCGCGTTGAAGCAGTGGATATTGCAACACGG TTTCAGGAGTCTAGCAAAGAAGTTTTCAAAATGGTGGAAGAAAAAACTGAAACTGCAAAA ACTCAGATAATTTTTGCAAGAGAGTATCTGAAGGATGTTACTATTAGCACAGAGCAGCTC AAATATCTTGTCATGGAAGCTATACGAGGTGGCTGTCAGGGGCATCGTGCTGAGTTGTAT GCTGCTCGAGTTGCAAAATGTCTAGCTGCTATGGAAGGACGTGAAAAAGTATTTGTGGAT GACCTCAAGAAAGCTGTAGAGCTAGTCATTCTACCTCGCTCCATCCTATCTGATAATCCA CAGGATCAGCAGCAAGAGCAACCACCCCCACCCCCGCCACCACCACCTCCAGAAAATCAA GATTCTTCAGAAGACCAAGATGAGGAAGACGAAGACCAAGAGGATGATGAAGAAGAAAAT GAACAACAAGACCAACAGATACCTGAGGAGTTCATATTTGATGCTGAAGGTGGTTTAGTA GATGACAAACTTCTTTTCTTTGCCCAGCAAGCACAGAGACGACGTGGAAAAGCTGGGCGA GCAAAGAATGTCATCTTCTCAGAAGATAGGGGCCGTTACATAAAGCCTATGCTTCCTAAG GGTCCAGTAAGGAGGTTAGCTGTTGATGCCACGCTTAGAGCAGCTGCACCATACCAAAAA CTGCGCAGAGAGAAAGAACGTGACAAAACAAGAAAGGTTTTTGTTGAAAAGACTGACATG AGAGCCAAAAGAATGGCTCGAAAAGCAGGTGCTCTAGTCATATTTGTTGTGGACGCTAGT GGTAGCATGGCTCTGAATCGTATGCAGAATGCTAAAGGTGCGGCGTTGAAGTTGCTTGCA GAAAGCTACACCAGCAGAGATCAGGTTTCAATTATTCCTTTTCGTGGAGATTATGCTGAG GTTTTGCTTCCACCATCAAGATCTATAGCAATGGCCCGGAAACGTCTTGAGAAGCTACCA TGTGGTGGTGGTTCTCCTTTAGCTCATGGCCTAAGTACAGCTGTCAGAGTGGGTCTGAAT GCTGAAAAGAGTGGCGATGTTGGGCGTATCATGATTGTTGCAATCACCGATGGAAGAGCT AATGTATCACTGAAGAGATCCACTGACCCAGAAGCTGCTGCTGCTTCAGATGCACCAAGA CCTTCTTCTCAAGAACTGAAGGTACTATTCATCGGCTGA

Peptide Sequence

PEP ID	Zm00001d013013_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:5:3206732:3213890:-1 gene:Zm00001d013013 transcript:Zm00001d013013_T007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mg chelataseD1 description:Magnesium-chelatase subunit ChlD chloroplastic
Sequence	MATPTALSTSLPYLPPRRVISFPSAAAVSLPVTSRPARLRDSRLAAAATSASEVLESTNG AVPTAAKDGAWRGYGREYFPLAAVVGQDAIKTALLLGAIDREIGGIAISGKRGTAKTVMA RGLHAMLPPIEVVVGSIANADPNSPDEWEDGLADQIQYDSDGNVKSEIVKTPFVQIPLGV TEDRLIGSVDVEASVRSGTTVFQPGLLAEAHRGVLYVDEINLLDDGISNLLLNVLTEGVN IVEREGISFRHPCKPLLIATYNPEEGSVREHLLDRIAINLSADLPMSFDDRVEAVDIATR FQESSKEVFKMVEEKTETAKTQIIFAREYLKDVTISTEQLKYLVMEAIRGGCQGHRAELY AARVAKCLAAMEGREKVFVDDLKKAVELVILPRSILSDNPQDQQQEQPPPPPPPPPPENQ DSSEDQDEEDEDQEDDEEENEQQDQQIPEEFIFDAEGGLVDDKLLFFAQQAQRRRGKAGR AKNVIFSEDRGRYIKPMLPKGPVRRLAVDATLRAAAPYQKLRREKERDKTRKVFVEKTDM RAKRMARKAGALVIFVVDASGSMALNRMQNAKGAALKLLAESYTSRDQVSIIPFRGDYAE VLLPPSRSIAMARKRLEKLPCGGGSPLAHGLSTAVRVGLNAEKSGDVGRIMIVAITDGRA NVSLKRSTDPEAAAASDAPRPSSQELKVLFIG

Transcript Sequence

Transcript ID	Zm00001d013013_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:3206732:3213890:-1 gene:Zm00001d013013 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mg chelataseD1 description:Magnesium-chelatase subunit ChlD chloroplastic
Sequence	GGCGCTGACGCACGAGAGCGGCCACCACCATGGCGACGCCCACCGCGCTCTCCACCTCAC TCCCCTACCTCCCGCCCCGCCGCGTCATCTCATTCCCATCCGCCGCCGCCGTCTCCCTCC CCGTCACCTCCCGCCCCGCCCGGCTGCGGGATTCCCGCCTCGCGGCCGCGGCAACCTCGG CCTCCGAGGTCCTCGAGTCCACCAACGGCGCCGTCCCCACTGCGGCCAAGGACGGCGCGT GGCGCGGGTATGGGAGGGAGTACTTCCCCCTGGCTGCCGTCGTTGGGCAGGATGCTATCA AAACTGCTCTGCTGCTTGGGGCGATTGATCGTGAGATCGGAGGCATTGCCATCTCAGGGA AGCGTGGGACGGCAAAGACAGTGATGGCTCGTGGTTTGCATGCTATGCTTCCACCCATTG AAGTGGTGGTTGGTTCCATTGCAAATGCTGACCCTAACTCCCCTGACGAATGGGAGGATG GTTTAGCTGATCAAATACAGTATGACTCTGATGGTAATGTCAAATCCGAGATTGTCAAAA CACCTTTTGTGCAGATTCCACTTGGTGTGACGGAGGATAGGCTCATTGGATCAGTTGATG TTGAAGCATCTGTGAGATCAGGGACTACTGTATTTCAACCTGGTCTTCTTGCTGAAGCAC ATAGAGGTGTTCTTTATGTTGATGAAATAAATCTATTGGATGATGGCATAAGCAATCTAC TTCTGAATGTCTTGACGGAGGGAGTTAACATTGTGGAAAGAGAGGGCATTAGCTTTCGCC ATCCCTGCAAACCACTTCTAATTGCTACTTACAATCCAGAGGAAGGGTCTGTACGTGAAC ACTTGCTTGATCGTATTGCAATTAATTTAAGTGCTGATCTTCCAATGAGTTTTGATGACC GCGTTGAAGCAGTGGATATTGCAACACGGTTTCAGGAGTCTAGCAAAGAAGTTTTCAAAA TGGTGGAAGAAAAAACTGAAACTGCAAAAACTCAGATAATTTTTGCAAGAGAGTATCTGA AGGATGTTACTATTAGCACAGAGCAGCTCAAATATCTTGTCATGGAAGCTATACGAGGTG GCTGTCAGGGGCATCGTGCTGAGTTGTATGCTGCTCGAGTTGCAAAATGTCTAGCTGCTA TGGAAGGACGTGAAAAAGTATTTGTGGATGACCTCAAGAAAGCTGTAGAGCTAGTCATTC TACCTCGCTCCATCCTATCTGATAATCCACAGGATCAGCAGCAAGAGCAACCACCCCCAC CCCCGCCACCACCACCTCCAGAAAATCAAGATTCTTCAGAAGACCAAGATGAGGAAGACG AAGACCAAGAGGATGATGAAGAAGAAAATGAACAACAAGACCAACAGATACCTGAGGAGT TCATATTTGATGCTGAAGGTGGTTTAGTAGATGACAAACTTCTTTTCTTTGCCCAGCAAG CACAGAGACGACGTGGAAAAGCTGGGCGAGCAAAGAATGTCATCTTCTCAGAAGATAGGG GCCGTTACATAAAGCCTATGCTTCCTAAGGGTCCAGTAAGGAGGTTAGCTGTTGATGCCA CGCTTAGAGCAGCTGCACCATACCAAAAACTGCGCAGAGAGAAAGAACGTGACAAAACAA GAAAGGTTTTTGTTGAAAAGACTGACATGAGAGCCAAAAGAATGGCTCGAAAAGCAGGTG CTCTAGTCATATTTGTTGTGGACGCTAGTGGTAGCATGGCTCTGAATCGTATGCAGAATG CTAAAGGTGCGGCGTTGAAGTTGCTTGCAGAAAGCTACACCAGCAGAGATCAGGTTTCAA TTATTCCTTTTCGTGGAGATTATGCTGAGGTTTTGCTTCCACCATCAAGATCTATAGCAA TGGCCCGGAAACGTCTTGAGAAGCTACCATGTGGTGGTGGTTCTCCTTTAGCTCATGGCC TAAGTACAGCTGTCAGAGTGGGTCTGAATGCTGAAAAGAGTGGCGATGTTGGGCGTATCA TGATTGTTGCAATCACCGATGGAAGAGCTAATGTATCACTGAAGAGATCCACTGACCCAG AAGCTGCTGCTGCTTCAGATGCACCAAGACCTTCTTCTCAAGAACTGAAGGTACTATTCA TCGGCTGATATCTACAAATTAGTATGATATGGGAAGTATCTAGTCTAGTTCCGATAATGG TGGAACAGTGTAATCGCCCTTCCAAACTTCACTGTGGCGCAAACCAATTCCAGATAGCTT CATTTTAGAAGCTGCTTATATCAACTATTTGCTGGCTAATGTGATTTAATCGCCTTT