Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012994_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:2879546:2882574:1 gene:Zm00001d012994 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine kinase CKI1
Sequence	ATGCAGGGCCACATGCTCCAGGCGTTGTGCATCCCCGCCGTGATTGTCTTTGCGAGCGCC CTGGTGCTGGTGGCCGCGGTGTTGTGCGCCGTCGCGGTGCGGGCGCTGCGGCGGGCGGCG GCGCGGGAGATGGCGCTGAACGTCGACCTGGCCCGGCAGAAGGAGGCGCTGCGGCAGGCA GAGCGCAAGAGCATGAATAAGAGCAATGCCTTTGCCAGCGCTAGCCACGACATCCGGTCC GCGCTGTCCGCCATCGCCGGGCTCGTGGACATGTCCCGTCAGGAGGCGCAGTCGCTCCCC GCCGTCATGGAAAACCTCGATCAGATGGGTGTCTGCACCAACAAGTTGTTCGATATCCTG AACTCAATTCTAGACACAAGCAAGGTGGAGTCGGGGAAGATGCAGCTAGAGGAAGCCGAG TTCAGCATGGCAGACGTCCTGCAGGAGTCGGTGGACATGGCCTACGTGACAGGCGTCCGG CGGGGAGTCGAGGTGGTCTGGGACCCCTGCGACTTCTCAGTCCTGAGATGCGCGGCTGTC CTCGGGGACAGCAAGCGCCTCAAGCAGATCCTAGACAACCTACTCGGCAACGCCCTCAAG TTCACCGATGAAGGTCACGTCGTCCTTCGGAGCTGGGCGACCCGACCGATCACCGGGAGC AATGTCAGAGCTCCGTCAAGGTTTGTGCACCCACGGCACGGCGGCGGCGGCTTCTTGGGA TGCTTGTTCAGGGCAAGGAAGCGTCCTGGTGACCAGGATCATGTGCAGAATGACCCCAAT TTGGTTGAGTTTTACTTTGAAGTGGTCGACACTGGCATTGGGATCCCCCAGGAGAAGAAG ATGTCCGTGTTCGAGAACTATGTTCAGGTGAACAATGGCCAAGGCGGCACGGGCTTGGGG CTCGGAATCGTGCAATCCTTTGTACGTCTGATGGGAGGAGAGATTAGCATCAAGGACAAA GAGCCCGGAGAAAGGGGAACATGCTTCGCGTTCAACGTGCTCCTGAGGATAAGCGAGGTG CAACAGCCTCAAGACATAGAAGAAGGACCGTCGGTTCCATTAGGCACCCTGAACCGCTCC ATTTCCATAGCCTCAGCGTTTCAAGAAGCCAGCAACTTCAAGGGCGTGCACTGCGTTCTC TACGTTCATGGGTATGAAACCAGGAGGATCCTGCAGACGTGGATGGAGAGCATCGAGGTC AAGGTCTGGCTGGTTCCGCAAGCCGAGTTCATCGGTTCCACCTTGGAGAAGGTGCAGAGC AATAGCACGGCCACCGCTACCGCGGAATGCGGCAGCGCCGACCGGTGCTTCAGCTCCAAG GAGATGGTGAACCTGTTGAGGAACAACTCTAGTCCTAGGAGAGCCATCCTCGGGGGGATT CCTTCCGGTATCCTTGTTGTCATCGACGTGTCCGGTGGTGAAACGGAAGAAATTTGCCAG GAGATGGCCAAGCTTTCCAGGATCAAGCATCAAGCCCCATGCAAAGTTGTTCTGCTCGAG GATATCAAGACCCCTTCCAATGATCTGAGGAGGCTCAAGGACATGGGCTGCGATCTCGTT TTGCGAAAGCCAGTGCACGGGTCTCGCCAGTTCACTCTCCTTATGACCCTGAGAGACCTC CAAGTTTTAGATGCACAGGCACAGTCTTCCCATGTTGGCCCTGAGATTGCTGGGAACAGC CAGCAACAAGATTTGCCGGATGTTGTTGTTCCTTGCGTGGAAGACACTGTTGCATCAACT GAAGCTTCATGCTTGGCTCAGAAGCCTGGAGATGATAAGCCGCTAGCCGGGATGCGAATC TTGCTGGCTGAAGACAATCTAGTGCTGCAATCAATCCAAAGGAAAATCATGAACCAGCTT GGAGCATTTGTCACAGTAGCTCAAAATGGAACTATGGCTGTGAACTTGCTCAGAGAAGCT CTTGAGCAAGCCAATGCTTCAGAAGAGGATATAGTGTCCTTGCCCTACCATGTCATCTTC ATGGATTGCCAGATGCCCGGTATGGATGGCTATGAAGCGACGAAACTCATCCGCGAGGAA GAACAACGCTACGGAATTCATGCTCCGATCATCGCTTTGACCGCGCACGACATGGAGGAG GATCTGCAGAAGGCCATCGATGCTGGGATGGATCTTCACCTGGCAAAACCAATATCGCGG AAGAAGATAGTGGACGCTGTTCGCAGTTTCTGCAAATGTGAGAATTGA

Peptide Sequence

PEP ID	Zm00001d012994_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:2879546:2882574:1 gene:Zm00001d012994 transcript:Zm00001d012994_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine kinase CKI1
Sequence	MQGHMLQALCIPAVIVFASALVLVAAVLCAVAVRALRRAAAREMALNVDLARQKEALRQA ERKSMNKSNAFASASHDIRSALSAIAGLVDMSRQEAQSLPAVMENLDQMGVCTNKLFDIL NSILDTSKVESGKMQLEEAEFSMADVLQESVDMAYVTGVRRGVEVVWDPCDFSVLRCAAV LGDSKRLKQILDNLLGNALKFTDEGHVVLRSWATRPITGSNVRAPSRFVHPRHGGGGFLG CLFRARKRPGDQDHVQNDPNLVEFYFEVVDTGIGIPQEKKMSVFENYVQVNNGQGGTGLG LGIVQSFVRLMGGEISIKDKEPGERGTCFAFNVLLRISEVQQPQDIEEGPSVPLGTLNRS ISIASAFQEASNFKGVHCVLYVHGYETRRILQTWMESIEVKVWLVPQAEFIGSTLEKVQS NSTATATAECGSADRCFSSKEMVNLLRNNSSPRRAILGGIPSGILVVIDVSGGETEEICQ EMAKLSRIKHQAPCKVVLLEDIKTPSNDLRRLKDMGCDLVLRKPVHGSRQFTLLMTLRDL QVLDAQAQSSHVGPEIAGNSQQQDLPDVVVPCVEDTVASTEASCLAQKPGDDKPLAGMRI LLAEDNLVLQSIQRKIMNQLGAFVTVAQNGTMAVNLLREALEQANASEEDIVSLPYHVIF MDCQMPGMDGYEATKLIREEEQRYGIHAPIIALTAHDMEEDLQKAIDAGMDLHLAKPISR KKIVDAVRSFCKCEN

Transcript Sequence

Transcript ID	Zm00001d012994_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:2879546:2882574:1 gene:Zm00001d012994 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine kinase CKI1
Sequence	ATGCAGGGCCACATGCTCCAGGCGTTGTGCATCCCCGCCGTGATTGTCTTTGCGAGCGCC CTGGTGCTGGTGGCCGCGGTGTTGTGCGCCGTCGCGGTGCGGGCGCTGCGGCGGGCGGCG GCGCGGGAGATGGCGCTGAACGTCGACCTGGCCCGGCAGAAGGAGGCGCTGCGGCAGGCA GAGCGCAAGAGCATGAATAAGAGCAATGCCTTTGCCAGCGCTAGCCACGACATCCGGTCC GCGCTGTCCGCCATCGCCGGGCTCGTGGACATGTCCCGTCAGGAGGCGCAGTCGCTCCCC GCCGTCATGGAAAACCTCGATCAGATGGGTGTCTGCACCAACAAGTTGTTCGATATCCTG AACTCAATTCTAGACACAAGCAAGGTGGAGTCGGGGAAGATGCAGCTAGAGGAAGCCGAG TTCAGCATGGCAGACGTCCTGCAGGAGTCGGTGGACATGGCCTACGTGACAGGCGTCCGG CGGGGAGTCGAGGTGGTCTGGGACCCCTGCGACTTCTCAGTCCTGAGATGCGCGGCTGTC CTCGGGGACAGCAAGCGCCTCAAGCAGATCCTAGACAACCTACTCGGCAACGCCCTCAAG TTCACCGATGAAGGTCACGTCGTCCTTCGGAGCTGGGCGACCCGACCGATCACCGGGAGC AATGTCAGAGCTCCGTCAAGGTTTGTGCACCCACGGCACGGCGGCGGCGGCTTCTTGGGA TGCTTGTTCAGGGCAAGGAAGCGTCCTGGTGACCAGGATCATGTGCAGAATGACCCCAAT TTGGTTGAGTTTTACTTTGAAGTGGTCGACACTGGCATTGGGATCCCCCAGGAGAAGAAG ATGTCCGTGTTCGAGAACTATGTTCAGGTGAACAATGGCCAAGGCGGCACGGGCTTGGGG CTCGGAATCGTGCAATCCTTTGTACGTCTGATGGGAGGAGAGATTAGCATCAAGGACAAA GAGCCCGGAGAAAGGGGAACATGCTTCGCGTTCAACGTGCTCCTGAGGATAAGCGAGGTG CAACAGCCTCAAGACATAGAAGAAGGACCGTCGGTTCCATTAGGCACCCTGAACCGCTCC ATTTCCATAGCCTCAGCGTTTCAAGAAGCCAGCAACTTCAAGGGCGTGCACTGCGTTCTC TACGTTCATGGGTATGAAACCAGGAGGATCCTGCAGACGTGGATGGAGAGCATCGAGGTC AAGGTCTGGCTGGTTCCGCAAGCCGAGTTCATCGGTTCCACCTTGGAGAAGGTGCAGAGC AATAGCACGGCCACCGCTACCGCGGAATGCGGCAGCGCCGACCGGTGCTTCAGCTCCAAG GAGATGGTGAACCTGTTGAGGAACAACTCTAGTCCTAGGAGAGCCATCCTCGGGGGGATT CCTTCCGGTATCCTTGTTGTCATCGACGTGTCCGGTGGTGAAACGGAAGAAATTTGCCAG GAGATGGCCAAGCTTTCCAGGATCAAGCATCAAGCCCCATGCAAAGTTGTTCTGCTCGAG GATATCAAGACCCCTTCCAATGATCTGAGGAGGCTCAAGGACATGGGCTGCGATCTCGTT TTGCGAAAGCCAGTGCACGGGTCTCGCCAGTTCACTCTCCTTATGACCCTGAGAGACCTC CAAGTTTTAGATGCACAGGCACAGTCTTCCCATGTTGGCCCTGAGATTGCTGGGAACAGC CAGCAACAAGATTTGCCGGATGTTGTTGTTCCTTGCGTGGAAGACACTGTTGCATCAACT GAAGCTTCATGCTTGGCTCAGAAGCCTGGAGATGATAAGCCGCTAGCCGGGATGCGAATC TTGCTGGCTGAAGACAATCTAGTGCTGCAATCAATCCAAAGGAAAATCATGAACCAGCTT GGAGCATTTGTCACAGTAGCTCAAAATGGAACTATGGCTGTGAACTTGCTCAGAGAAGCT CTTGAGCAAGCCAATGCTTCAGAAGAGGATATAGTGTCCTTGCCCTACCATGTCATCTTC ATGGATTGCCAGATGCCCGGTATGGATGGCTATGAAGCGACGAAACTCATCCGCGAGGAA GAACAACGCTACGGAATTCATGCTCCGATCATCGCTTTGACCGCGCACGACATGGAGGAG GATCTGCAGAAGGCCATCGATGCTGGGATGGATCTTCACCTGGCAAAACCAATATCGCGG AAGAAGATAGTGGACGCTGTTCGCAGTTTCTGCAAATGTGAGAATTGACAAAGCGTTTCT GCGTCGGGTGAAGAACTCTCAGGAAACCAGTGGTTTCATTGACTAGGATGGCGATGATCA GAGCTCACAACATCCATCTGGTCATTATATAGTTAGCTCTGGTTCAGGAAGCTCTCTTGT TTTCTGTTGTCTGTGGCCTGCGGGGCTGTCACTTTGGCCTGCACTGAAGTGTATCAGATA TCTGTTTTATATAAACATCTCTTCAAGTTTCTGGTCTCGTATGTATTTGCGCTTCAGGAA ATGCTGGCCAGTTGATCTGAG