Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012988_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:2849127:2850279:1 gene:Zm00001d012988 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 4B1
Sequence

ATGTCAGAGTCCGGCCCGGCCGCCGATGGAGGCGCCGGGGGCGGGCCGGCTGACGCTGGC
GGGGTGAGGTCCATGGTGCAGCGGTGGAAGATGGACGGCGCGCCGGCGCGGGCGCGGCTG
CTGCTGCGGGCCCTGGCGTGGCTCTTCTCCCTCCTCGCCCTCGTCGTCATGGCGTCCAAC
CAGCACGGCGGCAGCCAGGACTTCCGCGAGTACCCCGAATACAACTACTGCCTGGGCATC
TCGATCGTGGCGTGGCTGTACGCCACGGCGCAGGTCCTGCGCGACGTCCACCGCCTCGGC
TCCGGGCGGGACCTCATCGCGGCGAGGAAGGCGTCGGCCGTCGTCGACTTCGCCGGAGAC
CAGGTCGTCGCTTACTTCTTGATATCGGCCATGTCCGCGGCGGCGCCGGTGACGGACTAC
ATGCGCCAGGCGGCGGATAACCTGTTCACGGACTCGGCGGCGGCGGCGATCAGCATGGCC
TTCTTCGCGTTCGTGGCCATTGGCCTCTCTGCTCTCGTCTCCGGGTACAACCTCTCCATG
GAGGCTCTTGTATAG

Peptide Sequence

PEP ID

Zm00001d012988_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:2849127:2850279:1 gene:Zm00001d012988 transcript:Zm00001d012988_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 4B1
Sequence

MSESGPAADGGAGGGPADAGGVRSMVQRWKMDGAPARARLLLRALAWLFSLLALVVMASN
QHGGSQDFREYPEYNYCLGISIVAWLYATAQVLRDVHRLGSGRDLIAARKASAVVDFAGD
QVVAYFLISAMSAAAPVTDYMRQAADNLFTDSAAAAISMAFFAFVAIGLSALVSGYNLSM
EALV

Transcript Sequence

Transcript ID

Zm00001d012988_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:2849127:2850279:1 gene:Zm00001d012988 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 4B1
Sequence

CCGTAGCGGTACAACCACGTCGGTTTCGCTTTCGCCGGCTCTGCCTCGTGGTCCACCACC
AAGTTGCGTTTGCGTCCCTGGCCGAGGAGGAAAGCAACTAGCCAGCCAGTCACCAAACGC
GCAACCCGATCGAGATCGAGAGATCTGCATATGTCAGAGTCCGGCCCGGCCGCCGATGGA
GGCGCCGGGGGCGGGCCGGCTGACGCTGGCGGGGTGAGGTCCATGGTGCAGCGGTGGAAG
ATGGACGGCGCGCCGGCGCGGGCGCGGCTGCTGCTGCGGGCCCTGGCGTGGCTCTTCTCC
CTCCTCGCCCTCGTCGTCATGGCGTCCAACCAGCACGGCGGCAGCCAGGACTTCCGCGAG
TACCCCGAATACAACTACTGCCTGGGCATCTCGATCGTGGCGTGGCTGTACGCCACGGCG
CAGGTCCTGCGCGACGTCCACCGCCTCGGCTCCGGGCGGGACCTCATCGCGGCGAGGAAG
GCGTCGGCCGTCGTCGACTTCGCCGGAGACCAGGTCGTCGCTTACTTCTTGATATCGGCC
ATGTCCGCGGCGGCGCCGGTGACGGACTACATGCGCCAGGCGGCGGATAACCTGTTCACG
GACTCGGCGGCGGCGGCGATCAGCATGGCCTTCTTCGCGTTCGTGGCCATTGGCCTCTCT
GCTCTCGTCTCCGGGTACAACCTCTCCATGGAGGCTCTTGTATAGCCTGTGAATCACAAC
TCTACCATCTCATGTGTGATGTGTCACGTTACCCAACCTCGACACTGTTCATATAGTATT
GCCTCCAATTGTTAGTTGAGCATATTTCTTTTTCTCTCTGATAAAGAAGATGGAATGTGT
AACTACTGTTTAATTTACATAGACCATGCAAAGACGAAAGTCAAACTCACTGAGAATGAT
CCTTTCAAAAGCCA