Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012984_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:2827981:2833133:1 gene:Zm00001d012984 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein FLC EXPRESSOR
Sequence

ATGGCCGCGCGGCGCGGGCCCCACGTCATCAAGCTCCACGATCCCAACCCGCCCCTCCTC
GGCCGGGCGCCGGGGACCGCACCGGCCGCCATCCCCGCGCCGTCGCGCGATGAGGGCATC
CTCGCGCAGCACCCTCGCGCCGCCCCCTCGAGCGCATCCGCCTCGCACCCGGCCTTCGCC
CTTATCGAGGAGCGCCTCGTAGCCCGGGACCAGGACATCCAGGAGCTCCTCGTCGACAAC
CAGCGGTTCGCCGCCACGCACGTCGCGCTTCAGCAGCAGCTTATCGCGGCGCAGCACGAG
CTCCGGGCGGTCTCCGTCGCTGCCACCAGGGCGCGCGCCGAGCGGGAGGTCGAGGTGCGA
GCGCTGGCCGACCAGGCGGCCCACATAGAGGCCGAGGCGCGGGCCGTCGCCGCTGCGCGC
GCGGAGGTCGACCAGGTTCACGCCGACGTCCAGGTGCTCGTCGCGGCGCGCACTGACCTT
GTCAACCGGCTCCAGGGCCTACGGGAGAAGCTCGCGCACAAGAAGGCTGAGGCGAGTAAG
ACCGATTCCGTCCGTGCCCAGATTGAAACCATGCGCCGGGAGATCCAGAAGGGCAGAGCT
GCGGTTGATTTTGAAAAGAAGGCACACTCTGATAACCTTGAACAAAGTAAAGCAATGGAG
AAAAATATGATTGCTGTGGCTAGTGAGATTGAGAGGCTTCGAGGAGAGCTTGCAAATGCT
GAAAAAGGGGCCACCGCTGTCAACCCAGCAGCAGCTGTTGGTAACTCTGGGTATGTTGCG
GCTTATGGCAATTCTGAGCCAACATATACTGCAATGTATGGCAATCCTGATGCAACATAT
ACTGCACAGGCCTATCCTGATGCTTATAACACTAATCAGGCTCACATGCACGCTGGTGCC
AGTTCCTATTACACGAGTCAACCATTTTCCTATGGACAATACGAGAGCCAGCACACCAAT
ATCCAAAGATGA

Peptide Sequence

PEP ID

Zm00001d012984_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:2827981:2833133:1 gene:Zm00001d012984 transcript:Zm00001d012984_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein FLC EXPRESSOR
Sequence

MAARRGPHVIKLHDPNPPLLGRAPGTAPAAIPAPSRDEGILAQHPRAAPSSASASHPAFA
LIEERLVARDQDIQELLVDNQRFAATHVALQQQLIAAQHELRAVSVAATRARAEREVEVR
ALADQAAHIEAEARAVAAARAEVDQVHADVQVLVAARTDLVNRLQGLREKLAHKKAEASK
TDSVRAQIETMRREIQKGRAAVDFEKKAHSDNLEQSKAMEKNMIAVASEIERLRGELANA
EKGATAVNPAAAVGNSGYVAAYGNSEPTYTAMYGNPDATYTAQAYPDAYNTNQAHMHAGA
SSYYTSQPFSYGQYESQHTNIQR

Transcript Sequence

Transcript ID

Zm00001d012984_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:2827981:2833133:1 gene:Zm00001d012984 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein FLC EXPRESSOR
Sequence

GCACCTACTTTTTTTCCCTCTCGTCTCTGTTGCCCGGTTGCCCCTCGCTGTGACGACTGA
CGAGCAACCAATCCACCCAAATCCCAGACCGAGCTCCAATCCTCAGCGCCGCCAGTCGCG
CCGCCTCCGATGGCCGCGCGGCGCGGGCCCCACGTCATCAAGCTCCACGATCCCAACCCG
CCCCTCCTCGGCCGGGCGCCGGGGACCGCACCGGCCGCCATCCCCGCGCCGTCGCGCGAT
GAGGGCATCCTCGCGCAGCACCCTCGCGCCGCCCCCTCGAGCGCATCCGCCTCGCACCCG
GCCTTCGCCCTTATCGAGGAGCGCCTCGTAGCCCGGGACCAGGACATCCAGGAGCTCCTC
GTCGACAACCAGCGGTTCGCCGCCACGCACGTCGCGCTTCAGCAGCAGCTTATCGCGGCG
CAGCACGAGCTCCGGGCGGTCTCCGTCGCTGCCACCAGGGCGCGCGCCGAGCGGGAGGTC
GAGGTGCGAGCGCTGGCCGACCAGGCGGCCCACATAGAGGCCGAGGCGCGGGCCGTCGCC
GCTGCGCGCGCGGAGGTCGACCAGGTTCACGCCGACGTCCAGGTGCTCGTCGCGGCGCGC
ACTGACCTTGTCAACCGGCTCCAGGGCCTACGGGAGAAGCTCGCGCACAAGAAGGCTGAG
GCGAGTAAGACCGATTCCGTCCGTGCCCAGATTGAAACCATGCGCCGGGAGATCCAGAAG
GGCAGAGCTGCGGTTGATTTTGAAAAGAAGGCACACTCTGATAACCTTGAACAAAGTAAA
GCAATGGAGAAAAATATGATTGCTGTGGCTAGTGAGATTGAGAGGCTTCGAGGAGAGCTT
GCAAATGCTGAAAAAGGGGCCACCGCTGTCAACCCAGCAGCAGCTGTTGGTAACTCTGGG
TATGTTGCGGCTTATGGCAATTCTGAGCCAACATATACTGCAATGTATGGCAATCCTGAT
GCAACATATACTGCACAGGCCTATCCTGATGCTTATAACACTAATCAGGCTCACATGCAC
GCTGGTGCCAGTTCCTATTACACGAGTCAACCATTTTCCTATGGACAATACGAGAGCCAG
CACACCAATATCCAAAGATGACTGCCGGCACAAGATAGCTTTGACTCGTCTGCCATCTCA
TTCTCGCTGTAAAAGGATAGTCGCAGAATCCACCGGATTAAGCATGCTAGAAAAATCTGT
TGCATCGGAGCGCTGGAACTCCTCGTGGTCATGTTTGCTTTTCTTTTCTGGCTAATTTGT
TCCAGAATGGATGGGTCGAATTTTGGAGCAAAAATCTTTCTGGCTTCTCCATGTACTACC
ATAACGATTTGTCAGTTAATTCTGCAGATTGGTGTGGTGTTATTCAGGGCCGACTATGAT
GCCTCTAGCCATTTGTGTACATACGTATAAATGAACTAGGTGAGTGCCCGTGCGTTGCAA
CGGAACCGTATAATAACACGATAACTTATGTACATATGTGTGTTATATTGTTATGAGAAA
ATGTTTCAGAAT