Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012962_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:2395497:2399273:1 gene:Zm00001d012962 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 4
Sequence	ATGGGAAACTCCCTCGCCTGCTTCTGCTGCGGGGGCGGCGCCGCCGGCCGCCGCCGCCAC GTGGCGCCCGCGGCGCTCCCCTCGGACCCCGCCTACGACGAGGGCCTCGGCCACTCCTTC TGCTACGTCCGGCCGGATAAGGTGCTGGTGCCCTTCTCCGCGGACGACGACGACCTGGTC GCCGACGCCAAGGCGGCCGCCGCGGCCGAGGAGCCCACCACGTTCCGGGCCATATCCGGG GCCGCGCTCAGCGCCAACGTCTCCACGCAGCTCTCCACCTCCGTCCTCCTCCTGCTGCCG GACGAATCCTCCTCCGCCGCCGCCGCCTCCTCCTCCTCCTCCGGGTTCGAGAGCTCCGAA TCGTTCGCCGCCGTGCCGCTGCAGCCCGTCCCGAGGTTCCCGTCGGGCCCCATCTGCGCG CACGGGGGCGGGTTCCTCTCCGGGCCCATAGAGAGGGGGTTCCTCTCGGGCCCCCTCGAC GCGGCGCTCATGTCCGGCCCTCTCCCTTGCGCCGCCACATCCGCCCGCATGGGAGGAGGC GCCGTGCCCGCGCTCCGCCGGAGTCTCTCGCACGGCGGCCGCCGCCTGCGGAATTTTACC CGCGCGCTTCTCGCGCGGGCGGATAAGTTTCAGGATTCGATGGATCTCGGCTCGGCCGCC GCCGCCGCCTGTGGCGCCGGTTCCGCCGGGCTGCAGTGGGCGCAGGGGAAGGCCGGCGAG GACCGCGTCCACATCGTGGTGTCCGAGGAGCGGGGCTGGGTGTTCGTCGGCATCTACGAC GGCTTCAACGGTCCCGACGCCACGGACTTCCTCGTCTCCCATCTCTACGCCGCCGTGCAC CGCGAGCTCCGCGGCCTGCTCTGGGATCAGTGCGAGCAGGAGGAGCAGCGCGACACAGAT CCCGACCAGCCGATGAGCACCACGGCCTCATATCACCAGGACCAGCCCGCCAACGGCCGC CGCGCCCGCCGATCAAGACCGCCGCGCGGCGCCGATGATGACCAACGGCGGTGGAAGTGC GAGTGGGAGCGCGACTGCTCCAGCCTCAAGCCGCCAACTCAGCGCCCTCCTAGGAGCAGC AGCGAGAACGACCACCTCGCCGTGCTTAAGGCACTTGCGCGCGCGCTTCGCAAGACCGAG GAGGCCTACCTGGACGTCGCCGACAAGATGGTCGGCGAGTTCCCGGAGCTTGCGCTTATG GGCTCTTGCGTTCTTGCCATGCTTATGAAAGGAGAGGACATGTACCTCATGAATGTAGGT GACAGCCGGGCTGTGCTGGGAACAATGGACAGTGTTGATCTCGAGGAGATCAGTGGGGGT TCATTTGATGGATTGGTCGGGGATGGCACTCCGCTCTTGTCAGCTCTGCAGCTCACCTCA GAACATAGCACGTCAGTGCGAGAGGAAGTTTGCAGAATACGGAACGAGCATCCCGGAGAC CCGTCTGCAATCTCCAAGGACCGCGTGAAGGGCTCGCTTAAGGTGACGAGAGCGTTTGGA GCTGGTTTCTTGAAACAGCCCAAATGGAACGATGCGCTGCTGGAGGTGTTCAGAATAGAT TACGTCGGGTCATCCCCGTACATCACGTGCAATCCTTCGCTCTATCACCACAGGCTCAGC ACGAGGGACAGGTTCCTGATACTATCGTCAGACGGGCTCTACCAGTATTTCACCAACGAG GAGGCGGTCGCTCAGGTTGAGATGTTCATCGCAACAACCCCTGAGGGCGACCCTGCCCAG CATCTGGTGGAGGAAGTTCTTTTCAGAGCTGCAAACAAAGCAGGAATGGACTTCCACGAA TTGATCGAGATACCACATGGCGACCGCCGGCGGTACCACGACGACGTATCTGTCATTGTG ATATCTTTGGAGGGCAGGATCTGGAGATCATGCGTGTAA

Peptide Sequence

PEP ID	Zm00001d012962_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:2395497:2399273:1 gene:Zm00001d012962 transcript:Zm00001d012962_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 4
Sequence	MGNSLACFCCGGGAAGRRRHVAPAALPSDPAYDEGLGHSFCYVRPDKVLVPFSADDDDLV ADAKAAAAAEEPTTFRAISGAALSANVSTQLSTSVLLLLPDESSSAAAASSSSSGFESSE SFAAVPLQPVPRFPSGPICAHGGGFLSGPIERGFLSGPLDAALMSGPLPCAATSARMGGG AVPALRRSLSHGGRRLRNFTRALLARADKFQDSMDLGSAAAAACGAGSAGLQWAQGKAGE DRVHIVVSEERGWVFVGIYDGFNGPDATDFLVSHLYAAVHRELRGLLWDQCEQEEQRDTD PDQPMSTTASYHQDQPANGRRARRSRPPRGADDDQRRWKCEWERDCSSLKPPTQRPPRSS SENDHLAVLKALARALRKTEEAYLDVADKMVGEFPELALMGSCVLAMLMKGEDMYLMNVG DSRAVLGTMDSVDLEEISGGSFDGLVGDGTPLLSALQLTSEHSTSVREEVCRIRNEHPGD PSAISKDRVKGSLKVTRAFGAGFLKQPKWNDALLEVFRIDYVGSSPYITCNPSLYHHRLS TRDRFLILSSDGLYQYFTNEEAVAQVEMFIATTPEGDPAQHLVEEVLFRAANKAGMDFHE LIEIPHGDRRRYHDDVSVIVISLEGRIWRSCV

Transcript Sequence

Transcript ID	Zm00001d012962_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:2395497:2399273:1 gene:Zm00001d012962 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 4
Sequence	CTCCTCGCCCCCTTTCCCGTCTCCTCTCCCACAAGTCAACTCTCCCCACCTCTAGAGCCT AGCTAATGCTCCCCCCATTATAACCGCCCAACCCTTCCCCCATCCGCAGCTCTCCGCTCC CCTCCAGCCCGCCCGCTCACGTCCCGCCATGGGAAACTCCCTCGCCTGCTTCTGCTGCGG GGGCGGCGCCGCCGGCCGCCGCCGCCACGTGGCGCCCGCGGCGCTCCCCTCGGACCCCGC CTACGACGAGGGCCTCGGCCACTCCTTCTGCTACGTCCGGCCGGATAAGGTGCTGGTGCC CTTCTCCGCGGACGACGACGACCTGGTCGCCGACGCCAAGGCGGCCGCCGCGGCCGAGGA GCCCACCACGTTCCGGGCCATATCCGGGGCCGCGCTCAGCGCCAACGTCTCCACGCAGCT CTCCACCTCCGTCCTCCTCCTGCTGCCGGACGAATCCTCCTCCGCCGCCGCCGCCTCCTC CTCCTCCTCCGGGTTCGAGAGCTCCGAATCGTTCGCCGCCGTGCCGCTGCAGCCCGTCCC GAGGTTCCCGTCGGGCCCCATCTGCGCGCACGGGGGCGGGTTCCTCTCCGGGCCCATAGA GAGGGGGTTCCTCTCGGGCCCCCTCGACGCGGCGCTCATGTCCGGCCCTCTCCCTTGCGC CGCCACATCCGCCCGCATGGGAGGAGGCGCCGTGCCCGCGCTCCGCCGGAGTCTCTCGCA CGGCGGCCGCCGCCTGCGGAATTTTACCCGCGCGCTTCTCGCGCGGGCGGATAAGTTTCA GGATTCGATGGATCTCGGCTCGGCCGCCGCCGCCGCCTGTGGCGCCGGTTCCGCCGGGCT GCAGTGGGCGCAGGGGAAGGCCGGCGAGGACCGCGTCCACATCGTGGTGTCCGAGGAGCG GGGCTGGGTGTTCGTCGGCATCTACGACGGCTTCAACGGTCCCGACGCCACGGACTTCCT CGTCTCCCATCTCTACGCCGCCGTGCACCGCGAGCTCCGCGGCCTGCTCTGGGATCAGTG CGAGCAGGAGGAGCAGCGCGACACAGATCCCGACCAGCCGATGAGCACCACGGCCTCATA TCACCAGGACCAGCCCGCCAACGGCCGCCGCGCCCGCCGATCAAGACCGCCGCGCGGCGC CGATGATGACCAACGGCGGTGGAAGTGCGAGTGGGAGCGCGACTGCTCCAGCCTCAAGCC GCCAACTCAGCGCCCTCCTAGGAGCAGCAGCGAGAACGACCACCTCGCCGTGCTTAAGGC ACTTGCGCGCGCGCTTCGCAAGACCGAGGAGGCCTACCTGGACGTCGCCGACAAGATGGT CGGCGAGTTCCCGGAGCTTGCGCTTATGGGCTCTTGCGTTCTTGCCATGCTTATGAAAGG AGAGGACATGTACCTCATGAATGTAGGTGACAGCCGGGCTGTGCTGGGAACAATGGACAG TGTTGATCTCGAGGAGATCAGTGGGGGTTCATTTGATGGATTGGTCGGGGATGGCACTCC GCTCTTGTCAGCTCTGCAGCTCACCTCAGAACATAGCACGTCAGTGCGAGAGGAAGTTTG CAGAATACGGAACGAGCATCCCGGAGACCCGTCTGCAATCTCCAAGGACCGCGTGAAGGG CTCGCTTAAGGTGACGAGAGCGTTTGGAGCTGGTTTCTTGAAACAGCCCAAATGGAACGA TGCGCTGCTGGAGGTGTTCAGAATAGATTACGTCGGGTCATCCCCGTACATCACGTGCAA TCCTTCGCTCTATCACCACAGGCTCAGCACGAGGGACAGGTTCCTGATACTATCGTCAGA CGGGCTCTACCAGTATTTCACCAACGAGGAGGCGGTCGCTCAGGTTGAGATGTTCATCGC AACAACCCCTGAGGGCGACCCTGCCCAGCATCTGGTGGAGGAAGTTCTTTTCAGAGCTGC AAACAAAGCAGGAATGGACTTCCACGAATTGATCGAGATACCACATGGCGACCGCCGGCG GTACCACGACGACGTATCTGTCATTGTGATATCTTTGGAGGGCAGGATCTGGAGATCATG CGTGTAAATAGGTCAGCCATACTAGTAGTAGATTAGAGAAAGAAACGTATATAGAGAGAG AGAGGTTCTTGAAGGCCTACTTCACTCGTCCCAGCTGCTACTGTACAATATCAATGAAGC ACTGGGTGGTGGGCTTGGGATCTCAAGTTGAACCACGATGAGATTCACCTGGAGCGTGCC GATGCCGACGCAGTGCCGTATGAGATGTCCATGCAAAAGAGGATTTGTTCAATTACTAAT AACTCAATCAAATAGCGACCAATTGGTCAACTTTCTTTGACCTTTTGTTTTGCATCTTCT GTGTTCATACCATAACATGTGCACGGGAGACTGATTCAAAGTTGGACTTCTGAGATTCTG GACTTTGTGCAAAAAAATGCAGATGGGTTACTTGGTCAGAAATGGTTTGCGGTGTTGACC AGAC