Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012961_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:2387556:2389415:1 gene:Zm00001d012961 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGAGCTCGGCCACATGCCGCCGCGGCTTCAATGGCAAGTTCCGTCGCATCGCATCCGCG CCGTCGCCGCTTCTCCACCGCACCGGCCTGTCGCCACCCGCCGACTGTGGCGCGCGGGCT GCGGAGCAGCACTGCCTCCACCTTCTAGAGCGCTCCTCCGCGCCGGCCGCCGTCCTGCAG TCCCTCGCCTTCCTCCTCAAGTCCGGCCTCCACGCCAACCCGCTCGTCCTCACCAGGCTC TTCGCGTCCTCCGCTGCTGCGGCGCCCGCGCTGCTTGAGCCCCTTGTCGCTGCGCTCCTC GTGCCCTCCGTCCCCATCGACGCGTTCCTCGCCAACACTCTCATCCGCGCGCACGCCGCC TCCCCGCTCCCTTCGGCCCGCCTCCGCGCCGCCTCCTTCTTCCCGCTCATGCTCCGCAGC GCCACGTTGCCGAACAAGTTCACCTTCCCGTTCCTCCTCAAGGCCTGCGCCGCGTTCCCG GGCGTTGGTGTCCAGGCGCACGCCGCCGCTCTCAAGTTCGGGTTCACCACCGACCAGTAT GTTTCCAATACTCTCATACACATGTACTCGTGCTTCGGCGGTGAGTTTCTTGGGGACGCG CGGAATGTGTTCGACAGAATGGCCAAATCGAGCGCGGTTACTTGGAGCGCGATGATCGGC GGGTATGTGCGTAGCGGGCTGTCGAGTGATGCAGTTGGGTTGTTCAGGGAGATGCAGGCC AGCGGGGTGAGGCCAGATGAGGTCACAATGATTGGTGTTCTGGCAGCAGCTGCAGATTTG GGAGCGCTCGAGCTTGCTCGGTGGGTTGGCCGGTTTGTGGAGAAGGAGGGGATTGGGAAA TCTGTGACGCTGTGCAATGCGCTGATTGACGCTCTCGCCAAGTGCGGTGATTTGGATGGG GCTATGGCAGTGTTCCAGGGGATGAAGGAGCGGACTATTGTTTCTTGGACGTCAGTGATT GACGCACTTGCAATGGAGGGTCGTGGGAAGGAGGCTGTGGCGGTGTTCGAGGAGATGAAG ACTGCTGGCGTGCGGCCTGATGATGTTGCGTTCATTGGGGTGCTCACTGCGTGTAGCCAT GCTGGAATGGTTGATGAAGGTTATGGCTACTTTGAGTCAATGAGGATGGCATATGGCATT GATCCTAAGATCGAGCATTATGGCTGCATGGTAGACATGTTCGGTCGTGCTGGCATGGTC GAGCGGGCAATGGAGTTTGTTCATAAGATGCCCATGAAACCAAACCCAATAATATGGCGG ACGCTTGTTGCTGCCTGCCGTGCCCATGGCAGGCTTGAGCTCGGAGAAACCATCACCAGG AACCTTCTAAATGAGTACCCGGCACATGAGGCCAACTACGTCATGCTCTCCAATGTCTAT GCGCTGACACGGAGGTGGAAGGAGAAATCAGAGATTAGGAGAGAGATGAGCAAGAGAGGG ATCAAGAAGGTGCCAGGTTGCAGCCTTGTTGAGCTCGATGGGGAGGTCCATGAGTTCATA GCTGGTGACGAGTCGCATCCACAGTGGAAAGAGATATACATGATGGTCGAGGAGATGGCG AGGGAGCTCAGGCGTGCTGGGCACATCTCAGCTACATCAGAGGTTCTCCTTGACCTTGAT GAGGAGGATAAGGAGGTTGCGCTTCAGTGGCACAGCGAGAAGCTGGCGATTGCATTTGTG CTACTGAGGACTCCTCCTGGTACACAGGTCCGCGTGGTCAAGAATCTCCGAGTATGCTCT GACTGCCATGCAGCAATAAAGTGCATTTCGCTGGTTTATAACCGGGAGATCATTGTGCGT GATCGCAGCAGGTTCCATCGCTTCAAGAATGGCTCCTGCTCGTGCAATGATTTCTGGTGA

Peptide Sequence

PEP ID	Zm00001d012961_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:2387556:2389415:1 gene:Zm00001d012961 transcript:Zm00001d012961_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MSSATCRRGFNGKFRRIASAPSPLLHRTGLSPPADCGARAAEQHCLHLLERSSAPAAVLQ SLAFLLKSGLHANPLVLTRLFASSAAAAPALLEPLVAALLVPSVPIDAFLANTLIRAHAA SPLPSARLRAASFFPLMLRSATLPNKFTFPFLLKACAAFPGVGVQAHAAALKFGFTTDQY VSNTLIHMYSCFGGEFLGDARNVFDRMAKSSAVTWSAMIGGYVRSGLSSDAVGLFREMQA SGVRPDEVTMIGVLAAAADLGALELARWVGRFVEKEGIGKSVTLCNALIDALAKCGDLDG AMAVFQGMKERTIVSWTSVIDALAMEGRGKEAVAVFEEMKTAGVRPDDVAFIGVLTACSH AGMVDEGYGYFESMRMAYGIDPKIEHYGCMVDMFGRAGMVERAMEFVHKMPMKPNPIIWR TLVAACRAHGRLELGETITRNLLNEYPAHEANYVMLSNVYALTRRWKEKSEIRREMSKRG IKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELRRAGHISATSEVLLDLD EEDKEVALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKCISLVYNREIIVR DRSRFHRFKNGSCSCNDFW

Transcript Sequence

Transcript ID	Zm00001d012961_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:2387556:2389415:1 gene:Zm00001d012961 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGAGCTCGGCCACATGCCGCCGCGGCTTCAATGGCAAGTTCCGTCGCATCGCATCCGCG CCGTCGCCGCTTCTCCACCGCACCGGCCTGTCGCCACCCGCCGACTGTGGCGCGCGGGCT GCGGAGCAGCACTGCCTCCACCTTCTAGAGCGCTCCTCCGCGCCGGCCGCCGTCCTGCAG TCCCTCGCCTTCCTCCTCAAGTCCGGCCTCCACGCCAACCCGCTCGTCCTCACCAGGCTC TTCGCGTCCTCCGCTGCTGCGGCGCCCGCGCTGCTTGAGCCCCTTGTCGCTGCGCTCCTC GTGCCCTCCGTCCCCATCGACGCGTTCCTCGCCAACACTCTCATCCGCGCGCACGCCGCC TCCCCGCTCCCTTCGGCCCGCCTCCGCGCCGCCTCCTTCTTCCCGCTCATGCTCCGCAGC GCCACGTTGCCGAACAAGTTCACCTTCCCGTTCCTCCTCAAGGCCTGCGCCGCGTTCCCG GGCGTTGGTGTCCAGGCGCACGCCGCCGCTCTCAAGTTCGGGTTCACCACCGACCAGTAT GTTTCCAATACTCTCATACACATGTACTCGTGCTTCGGCGGTGAGTTTCTTGGGGACGCG CGGAATGTGTTCGACAGAATGGCCAAATCGAGCGCGGTTACTTGGAGCGCGATGATCGGC GGGTATGTGCGTAGCGGGCTGTCGAGTGATGCAGTTGGGTTGTTCAGGGAGATGCAGGCC AGCGGGGTGAGGCCAGATGAGGTCACAATGATTGGTGTTCTGGCAGCAGCTGCAGATTTG GGAGCGCTCGAGCTTGCTCGGTGGGTTGGCCGGTTTGTGGAGAAGGAGGGGATTGGGAAA TCTGTGACGCTGTGCAATGCGCTGATTGACGCTCTCGCCAAGTGCGGTGATTTGGATGGG GCTATGGCAGTGTTCCAGGGGATGAAGGAGCGGACTATTGTTTCTTGGACGTCAGTGATT GACGCACTTGCAATGGAGGGTCGTGGGAAGGAGGCTGTGGCGGTGTTCGAGGAGATGAAG ACTGCTGGCGTGCGGCCTGATGATGTTGCGTTCATTGGGGTGCTCACTGCGTGTAGCCAT GCTGGAATGGTTGATGAAGGTTATGGCTACTTTGAGTCAATGAGGATGGCATATGGCATT GATCCTAAGATCGAGCATTATGGCTGCATGGTAGACATGTTCGGTCGTGCTGGCATGGTC GAGCGGGCAATGGAGTTTGTTCATAAGATGCCCATGAAACCAAACCCAATAATATGGCGG ACGCTTGTTGCTGCCTGCCGTGCCCATGGCAGGCTTGAGCTCGGAGAAACCATCACCAGG AACCTTCTAAATGAGTACCCGGCACATGAGGCCAACTACGTCATGCTCTCCAATGTCTAT GCGCTGACACGGAGGTGGAAGGAGAAATCAGAGATTAGGAGAGAGATGAGCAAGAGAGGG ATCAAGAAGGTGCCAGGTTGCAGCCTTGTTGAGCTCGATGGGGAGGTCCATGAGTTCATA GCTGGTGACGAGTCGCATCCACAGTGGAAAGAGATATACATGATGGTCGAGGAGATGGCG AGGGAGCTCAGGCGTGCTGGGCACATCTCAGCTACATCAGAGGTTCTCCTTGACCTTGAT GAGGAGGATAAGGAGGTTGCGCTTCAGTGGCACAGCGAGAAGCTGGCGATTGCATTTGTG CTACTGAGGACTCCTCCTGGTACACAGGTCCGCGTGGTCAAGAATCTCCGAGTATGCTCT GACTGCCATGCAGCAATAAAGTGCATTTCGCTGGTTTATAACCGGGAGATCATTGTGCGT GATCGCAGCAGGTTCCATCGCTTCAAGAATGGCTCCTGCTCGTGCAATGATTTCTGGTGA