Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012958_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:5:2364388:2370531:-1 gene:Zm00001d012958 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase APK1A chloroplastic
Sequence	ATGTTCTCAAAGAGTGGTGGTAAGGATGGGAGTAGGCTTAGCGGCTGTAGTAGTCGAGCC TCTTCAGCTTCCATGCCTCCAAGTGTGAAGACTGAATGTGAAATCCTGCAATCCGCCAAT GTTAAGATCTTCACCTTCAATAATCTCAAGGCAGCCACAAGGAATTTCCGTCCTGATAGT GTTCTAGGTGAAGGAGGGTTCGGCTCTGTCTATAAAGGATGGGTCGATGAGAACACATTA TCACCTTGCAGGCCTGGCACTGGAATTGCTGTTGCTGTGAAAAGACTAAATCATGAGGGT TTGCAAGGGCACCGAGAGTGGTGGGCGGAAGTTAATTACCTAGGTCAGTTCTGTCATCCC AACCTTGTCAAGCTGATTGGATACTGCTTAGAGGATGAGCACCGACTGCTAGTGTACGAG TTCATGCCCCGCGGGAGCTTGGAAAATCATCTGTTTAGGAGAGGCTCATATTTCCAACCT CTGTCATGGAACCTTAGAATGAAGGTTGCACTAGGAGCAGCAAAAGGACTGGCTTACCTT CATAGTGGAGAGGCAAAAGTTATTTACCGAGATTTCAAGACTTCCAACATCCTGCTTGAT ACAGATTATTCTGCAAAGCTTTCTGATTTTGGATTGGCTAAGGATGGTCCTGTTGGTGAG AAGAGCCATGTGTCCACAAGAGTCATGGGAACATATGGTTATGCAGCTCCTGAGTATCTC TCAACAGGCCACCTAACCGCAAAGAGCGACATCTATAGCTTTGGAGTCGTACTTCTGGAG GTGCTGTCAGGCCGGCGGGCCATTGACAAGAACCGCCCCCAGGGTGAGCACAACCTTGTG GAGTGGGCTCGACCTTACCTCACACACAAGCGCAAGATATTCCGGATCCTGGATACCAGG CTGGAAGGCCAATACAATCTCGACGGCGCACAAGCCATTGCCGCCCTTTCTCTTGAGTGC CTGTCCTACGAAGCTAAGATGAGGCCGACTATGGATGCCGTGGTAACTATCCTAGAGGAG CTCCAAGACTCTGGTGAGGCCGAGAAGCGTCAAGGACCCAAGGCTGGAACCAAACAGGCG CCTGCTGCTGCTGCCGCGAGCGCTAGCAAGAGCAGTCGCAAGCTTCGCCGGAGAACCCTG GGAGGGACGAAGGAGACGACTGTTGGTCCAAATCCAAAACCATTATTGGCCCGTTCTCGT TAG

Peptide Sequence

PEP ID	Zm00001d012958_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:5:2364388:2370531:-1 gene:Zm00001d012958 transcript:Zm00001d012958_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase APK1A chloroplastic
Sequence	MFSKSGGKDGSRLSGCSSRASSASMPPSVKTECEILQSANVKIFTFNNLKAATRNFRPDS VLGEGGFGSVYKGWVDENTLSPCRPGTGIAVAVKRLNHEGLQGHREWWAEVNYLGQFCHP NLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRMKVALGAAKGLAYL HSGEAKVIYRDFKTSNILLDTDYSAKLSDFGLAKDGPVGEKSHVSTRVMGTYGYAAPEYL STGHLTAKSDIYSFGVVLLEVLSGRRAIDKNRPQGEHNLVEWARPYLTHKRKIFRILDTR LEGQYNLDGAQAIAALSLECLSYEAKMRPTMDAVVTILEELQDSGEAEKRQGPKAGTKQA PAAAAASASKSSRKLRRRTLGGTKETTVGPNPKPLLARSR

Transcript Sequence

Transcript ID	Zm00001d012958_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:2364388:2370531:-1 gene:Zm00001d012958 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase APK1A chloroplastic
Sequence	GCCCGCCATTAACTGCCTCACGCTCTTCTCTTGCTCGCTCGGCTCACTCCCTCCACAAAG CGGCAGCCTCACGCGCTCCACCACGCCACCACCCTCCTTCCTCTCTATATACTCACTCCT CCCGTTTTCCGTCCATTTTCATCCATCCGCCCACAGCTTCGCAGCCCGCGCCCCTAAAAC CCTAGCCCCGGCGGATCGCGGGGCGCCTCTGGTGCCAGCGACGCGGCTCGTTTGATCCGA TTGGTTGGTCGGGCCCCGCCCTCGCTGCCGCGCTTCGCTCCGGCGGTGTGGCGGGGAGAG CACCGAGCACGCGGGAATGGGGAACTGCTGGGGCGCGCGGATCAAGGACGGGAGCGCTGG CGCCTCAGGTTCGTCCGTCCTCTCCTAGTCGTTGCTTGGTAAAGTTATTTCGTGGGGCTA TGCGAGGAGGGGTGTCGGCGATCCGTGCTTGCTAGTTGCGCTCTCGATCAGGCGGAGGGG GTTTGAGCCTTTGAAGTATGAAAATCCCGGTCATTTGATCGCGACACATGTTGCGAAATG ATGTGTACTCATCTGCTTCATGCGGTTTTGGGGAGATTTGATTAGATAAGTTTCCTTGCA ACAGAAGTGAAAACGTTTATCGAATCAAGTATGCAATGGCGTACTGTGCTTATGTACTCT TGCTAGTTGGTTAGGCTGATTGTGATTGGGCTAATTCCGGTGGGTCTTGTTCTGTTAGAT GATTCCAACGTTTCAGCTGTCTTGCCAACTTAACTGTGTTCAAGGAGCTAGAAGTAAGCC ATCGCAATCGCTTTAGAGCAGTTTTGCTAAAGCGAGCTTGGTATCTGAGGCGTTGTACTC TGTAGGTGCTTCTGCACTTGTGCAAAAAGAGCTTAGCCTTTATTAGATGCATGATAGGTA TTACCTTATTTCGTATGGTAATGGATGGGACATGTGCAGTAGTTCTTTCTTTATCTAGTC GGTAGGACTTGCACTCCTAAGATGACATCAGTAAGTGACATGAGGTTGACTCTACTGCAA GAAGTCTTGTTACTACCTTATTAGATAATGCTTTGCGTTGATGGTCCACCTACATGTGCA GTTCCAACCACCCTGGTTTCTGTTTTTGACCTAGGTGACATATGATCTAAGCAGGACCAA TACTGTGGACTGTGGTAGAGTAATAATTAGTATGACTTTTCTTGTAGCATTGTCAGTGTA TCCCAGATGGCCACTATTTCACATGCTTATACTGTTGAGTGTTGACATTCACTATTCACA TTTTCGATGCTGCGAAATACTCATCAATGTGCACAATGTTGTACATTCCATTAAAACTTG GTTCATGTGGCACACTAGATGGTTCGAGCATTTAGAGACAACCGAACTCTAGCCTTTTTG TTTTCTTCATTCAATGTAGGCTTGATTGCATTTGAGTGACGTGCCGAGCGCATTGGATAA ATCCTTGAAAGTTGTTCTGTTTTCCAGTGCTATTGTTTTGATTATTTCTGGGTCAAATGA CTTTTTTAGGACCACATTATTTTGGTTTTTTGCTCACAACACCGTTAACCCCGCCGCCTT GTTTTGCATCGTACCATATGCGCTGGACTACTCTCAAAGGTACTCCAGTTTCACGTGAAA CAGCCTTAGTGACCCCTCTGTCTAACTTACCGACACTAGTTCGCTCTAAAAGCATGCCAT AGATAGATTGCTTCAATTCATTGTTGTATGTGTTCCTCCTCCTAATCTCTCCTTCATCTA AAAAAAGTACGTACCATAAGTACAACTAGAACCACCAAATAGTCCTACTTACTGTTACGA ACACTAGAACCACCTTGATCAACATGGTCGACACGAGGTCCTTCTGGTTGTGCGTCACTT GAGCCCTCAGCATGGGGTTCATGCTGGACGTCCTCCTGCCTAGAAGTTGCATGAACACGC CGTGTGAGTCCTAGACTCGCTTGGCTACGGTTGGTGTGAACAGGGCCATCATGTTGCCCG CGCCCAACAATGAAACCAACTCCACGCCCTCGACCAGCCAGTCCAAGCCTACCACGAACA CGACCTGCTACTGCATCTGCTGATGGATTACTCATTTGTTTTCAACACAACAAGAATTCA TATGGATTTCGGATTTTGGCAATGTCATGCTTACTTTGTGTGTGCGTATGGCCACCGACG TTCTGTGTTGTGTTTGTGTGGCCGGCATCAACATTTTGACCTTCTCCATGATCATCATAG ACTGCACGAGATCAAACGAATTGTTCATTTGAGTAGCAAGACAACTAGAGAGCGATCAAG AAATGTAGCAAACGTAATTGGATTGACCTACCTTCATCCACTACGGTGTGAAGATCTTCA CCTGGACCAAGAAGACACGCCAGGAGTAGCATGCATCGTGCAAAGAGGGCCATGAGGTAG AGCGAATAGCGCAGCGTTCTTCATGGGGTATTTAGTGCTAATTTTCCCTCCAAAATTTTC ACTGGCCGGCACCGCGCGCGCTATTCCTTTGGCCGCCACCGCGCACATAATGAGTCAGGA AGCGAATGAACGCGCGCAAAATTCCTTCGCCCGGCAACATAATCTATTCCTTGCATGCAT GACGCTAATATATTTCCATCCATGCAGTTTCCTGCATGTGCATGTCCATAATTATATGCC TACGATTCTCTCTCACGCCCACAAATTTCTCCACGCATGCAGCCAGGGGCAACCAGCGGA AAAAACAAAGCTACGCTAATTTTCGCGCAAAGCCTTTAGACGCCTTGTTTCATGGGAAGG AGGGAGTATATCACACGAACAAAGCAAAAAATATATTAGAAATCGGTAGTTGTTTCCTGT TAATATTTTTTATTCATGTGCTTAATGCATGGTGTTGACACGGGATTAGGAAAATCACCG ATGTTTTACCTTTATTTATTTTTAATGTCATAACAAAGCTAGTGATGTCAACCAGTTCAC ATCAGATCGTCGGTTTCTATGACCTATTTATTAAAAGTTTTGAGTAGTCACAGTTACATT AATGGCGACTTATTTTGTTTTTACCGATAAAGGCCATGTATGTTTGCTGTGTAATCATAT GCCTAGGTTGCTCTAGGAAAATTGGTTGCTGGAGCTGATTCTTCAACATCAACCAATCCA GTAGTGCTTTTTTGTGTGTCAAAGATGGCATTTGTTACTGCATATAGCTGTCTGTAGGTT TTCTTATCAATCTTTAGTGATGACCAAGCAATGATTCCCAATATTCAGTTCCTTATATTA TATGGTGCTAGTTTCCCCATTAAAATTTATGCTAAAGTTGATGTACCTTTCTGGGTAGTG ACGGTTGTTGTTTATATGGGCCTCGGATATATCACCACAATTCACCATTGGAACAATATG AGGCTTTTGTTCAGTGTTTTCTTTACGCTTCCTTAAGTAGAATCTTTACCAAATGCATGG TCCGCAGGAATGTTCTCAAAGAGTGGTGGTAAGGATGGGAGTAGGCTTAGCGGCTGTAGT AGTCGAGCCTCTTCAGCTTCCATGCCTCCAAGTGTGAAGACTGAATGTGAAATCCTGCAA TCCGCCAATGTTAAGATCTTCACCTTCAATAATCTCAAGGCAGCCACAAGGAATTTCCGT CCTGATAGTGTTCTAGGTGAAGGAGGGTTCGGCTCTGTCTATAAAGGATGGGTCGATGAG AACACATTATCACCTTGCAGGCCTGGCACTGGAATTGCTGTTGCTGTGAAAAGACTAAAT CATGAGGGTTTGCAAGGGCACCGAGAGTGGTGGGCGGAAGTTAATTACCTAGGTCAGTTC TGTCATCCCAACCTTGTCAAGCTGATTGGATACTGCTTAGAGGATGAGCACCGACTGCTA GTGTACGAGTTCATGCCCCGCGGGAGCTTGGAAAATCATCTGTTTAGGAGAGGCTCATAT TTCCAACCTCTGTCATGGAACCTTAGAATGAAGGTTGCACTAGGAGCAGCAAAAGGACTG GCTTACCTTCATAGTGGAGAGGCAAAAGTTATTTACCGAGATTTCAAGACTTCCAACATC CTGCTTGATACAGATTATTCTGCAAAGCTTTCTGATTTTGGATTGGCTAAGGATGGTCCT GTTGGTGAGAAGAGCCATGTGTCCACAAGAGTCATGGGAACATATGGTTATGCAGCTCCT GAGTATCTCTCAACAGGCCACCTAACCGCAAAGAGCGACATCTATAGCTTTGGAGTCGTA CTTCTGGAGGTGCTGTCAGGCCGGCGGGCCATTGACAAGAACCGCCCCCAGGGTGAGCAC AACCTTGTGGAGTGGGCTCGACCTTACCTCACACACAAGCGCAAGATATTCCGGATCCTG GATACCAGGCTGGAAGGCCAATACAATCTCGACGGCGCACAAGCCATTGCCGCCCTTTCT CTTGAGTGCCTGTCCTACGAAGCTAAGATGAGGCCGACTATGGATGCCGTGGTAACTATC CTAGAGGAGCTCCAAGACTCTGGTGAGGCCGAGAAGCGTCAAGGACCCAAGGCTGGAACC AAACAGGCGCCTGCTGCTGCTGCCGCGAGCGCTAGCAAGAGCAGTCGCAAGCTTCGCCGG AGAACCCTGGGAGGGACGAAGGAGACGACTGTTGGTCCAAATCCAAAACCATTATTGGCC CGTTCTCGTTAGCGAGGAAAGGGAAAGCGTTGCTTGGTCAGGTGGTTTGGGTAGGTAGAC TGTAGCTTGTGAATATGATCTGTCCTGTGTATAACGAGGGTAAACGGATTCTTTTTTTTG GCAACGAGTCTTGTCGTTTTTTATTTTATCGTGAGCTGCTCGGTTTCTGCATTATCTGGA TCCTGGATGTCGAAACCCATGGCATGGCATCAAGGGAGGAGAGGCCATGTTCCGAGTGTT TAACCTGAGTCATT