Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012931_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:2173191:2178425:-1 gene:Zm00001d012931 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase protein with tetratricopeptide repeat domain
Sequence

ATGAAGAACAGCCGTGATGGAAAGAGCTACAGTACTAATTTGGCCTTCACGCCTCCTGAG
TATCTTAAGACAGGCAGAGTAAGTCCTGAGAGTGTGGTTTACAGTTTTGGCACTGTCTTG
CTTGATCTCCTGAGTGGAAAGCACATTCCACCAAGTCATGCACTCGACCTTATAAGAGGG
AAGAACTTTCTAGTGCTGATGGATTCTTGCTTGGAAGGTCATGTATCCAGCTCCGATGGA
ACTGACTTGATGCGATTAGCATCCCGCTGCTTGCAATATGAAGCACGTGACCGGCCAAAT
TTGAAAACGGTGGTATCCGGTCTCGAATGTCTCCAGAAAGATGTTTCTACTCCTTCACAC
ACTTTGCTGGGGATCCAACATGATAATAAAAACTCAGATCGAATTTCTTTATCCGCTATT
GGGAAAGCTTTTGCCAGAGCAGACCTGAATGAGGTGCACGAAATATTACTGCATGATGGA
TATGATGAGGATGACACTGCTAATGCTGAGCTATCTCTCCAGTCATGGAATGATGATGTA
TCTGAGAGCTTTGTTGTTAAGAGGCATGCAGACAACGCCTTTAGGTCTAAGGATTACTCG
ACTGCAATTGAGTGTTACTCAAGGTTCATCGACTCAGGTGCAGGGGTGGCTCCAACCATG
CTGGGGCGGAGATGCTTCGCATATGTGGTGGCTGGCAACCCACAGGAAGGCCTTGAGGAT
GCAAAGAGAGCCGAGGTTATTGCATCGGACTGGCCGATGGGACACTACCTGCAGGCCTTG
GCACTTCACAACCTGGGAAGGGAGGCTGAAAGCCAAGAAGCACTGAAGAATGGCACTGCC
TTGGAAGCTGCAATGAATAGTAGAGCTAGAACTGTATAG

Peptide Sequence

PEP ID

Zm00001d012931_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:2173191:2178425:-1 gene:Zm00001d012931 transcript:Zm00001d012931_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase protein with tetratricopeptide repeat domain
Sequence

MKNSRDGKSYSTNLAFTPPEYLKTGRVSPESVVYSFGTVLLDLLSGKHIPPSHALDLIRG
KNFLVLMDSCLEGHVSSSDGTDLMRLASRCLQYEARDRPNLKTVVSGLECLQKDVSTPSH
TLLGIQHDNKNSDRISLSAIGKAFARADLNEVHEILLHDGYDEDDTANAELSLQSWNDDV
SESFVVKRHADNAFRSKDYSTAIECYSRFIDSGAGVAPTMLGRRCFAYVVAGNPQEGLED
AKRAEVIASDWPMGHYLQALALHNLGREAESQEALKNGTALEAAMNSRARTV

Transcript Sequence

Transcript ID

Zm00001d012931_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:2173191:2178425:-1 gene:Zm00001d012931 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase protein with tetratricopeptide repeat domain
Sequence

GGCAGCAAACAGGTTGCACAGCGGGGGAAGGAAGAGCGGAAAAGCCCATCGCCACCTTCC
TCCTCGGATCCACAACCCGGACGCCCCACCCGGGTCCTTTCTTCCTCCCTCCCAGTCCCA
CTCCCAACACCGACCGCCCCTCCTCATCACACCTCGCAACTATTTTAGTCTAACCGAGTC
CAACCAGTGGCAAGCGAGCGAGAGGTGGTGGACGGAACCGTCGCCTGCTGCGGGCTGCCC
TACGAGATCTAGGCAAGCGAGCGAGCGAGCGCGGCCATGGGTGCTCGCTGCTCCAAGCTC
TCCGTCTGCTGGTGGCCTCCCCGCTTCAAATCGCCGATGCTCGAGAATGGCGCCGCCGAA
GATGACGGCAGCGGCGTGCCGGTGTTCGCCGAGTACAGCCTCGCCGAGCTCCGGGTGGCC
ACCGACGGCTTCGCCACCGACCGCATCGTGTCGGAGCACGGCGAGAAGGCGCCCAACGTG
GTCTACCGCGGCACGCTCTTCAGCTCCGGCCGCACCGTCGCCATCAAGCGCTTCGGCCGC
TCCGCCTGGCCGGACTCACGACAGTTCCTGGAGGAGGCGAGGGCTGTTGGGCAGCTGCGC
AGTCGCCGGCTGGCCAATCTGATCGGTTGCTGCTACGAGAGCGGCGAGCGTCTCCTCGTC
GCCGAGTTCATGCCGCACGAGACCTTGGCAAAGCATCTTTTCCACTGGGAGACAAATCCG
TTGAGTTGGGCAATGAGGACGAGGGCTGCATTTTATGTGGCACAGGCGTTGGAATACTGC
AGTAGCAAAGGGAGGGCACTCTATCATGACCTGCATGCATACAGGGTCGTCTTCGATGCG
GTGGGTCTTTACTTGTTCGCGTTAGTTGCTTTTCTGAGTTTTGATACAAAGCATTAACCT
TTTTGTGTTTTGATTGTGGGCCAATTTTATAGGAAGGTAACCCAAGACTATCATGTTTTG
GTCTGATGAAGAACAGCCGTGATGGAAAGAGCTACAGTACTAATTTGGCCTTCACGCCTC
CTGAGTATCTTAAGACAGGCAGAGTAAGTCCTGAGAGTGTGGTTTACAGTTTTGGCACTG
TCTTGCTTGATCTCCTGAGTGGAAAGCACATTCCACCAAGTCATGCACTCGACCTTATAA
GAGGGAAGAACTTTCTAGTGCTGATGGATTCTTGCTTGGAAGGTCATGTATCCAGCTCCG
ATGGAACTGACTTGATGCGATTAGCATCCCGCTGCTTGCAATATGAAGCACGTGACCGGC
CAAATTTGAAAACGGTGGTATCCGGTCTCGAATGTCTCCAGAAAGATGTTTCTACTCCTT
CACACACTTTGCTGGGGATCCAACATGATAATAAAAACTCAGATCGAATTTCTTTATCCG
CTATTGGGAAAGCTTTTGCCAGAGCAGACCTGAATGAGGTGCACGAAATATTACTGCATG
ATGGATATGATGAGGATGACACTGCTAATGCTGAGCTATCTCTCCAGTCATGGAATGATG
ATGTATCTGAGAGCTTTGTTGTTAAGAGGCATGCAGACAACGCCTTTAGGTCTAAGGATT
ACTCGACTGCAATTGAGTGTTACTCAAGGTTCATCGACTCAGGTGCAGGGGTGGCTCCAA
CCATGCTGGGGCGGAGATGCTTCGCATATGTGGTGGCTGGCAACCCACAGGAAGGCCTTG
AGGATGCAAAGAGAGCCGAGGTTATTGCATCGGACTGGCCGATGGGACACTACCTGCAGG
CCTTGGCACTTCACAACCTGGGAAGGGAGGCTGAAAGCCAAGAAGCACTGAAGAATGGCA
CTGCCTTGGAAGCTGCAATGAATAGTAGAGCTAGAACTGTATAGCCCTGAATTTGTGATA
CCCTGTCCTGCTTGTACCTAGATCGCCTCCCTCCAATGCTTCGTCACCAGTAGGGGCTGT
TTTTGGTATTCCCTAACTTGTATCGGTATTTCCCCTAGTTTCACAAGTCGAAAAAACTCC
TAGGGGCTAGTTTGGATACTTTGGGATTAGAGTGTTTTGAAGGGATTGGAGAGGGTGTAA
ATCCCTAATAGATCAAATACTCTCTCAATACATCTCAATCCACTCCAATCCCACTCGTTA
CTAGAGTATCCAAACTAGGCCTAGGCTGGCTGTTGTTACACCTCCAATATATTTATGAAT
ACAGGAATGGGCAACTAGCATTCTGTTGATGTGAGTTTGTAAAGTGAGAGTTTCTATTTA
TTTCAACAAATTCATGTACATACACACTTTTGAACCCTGCAACTTAAGATATTTGAGGTC
AGGCAAACT