Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012922_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:5:1978807:1993142:1 gene:Zm00001d012922 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase3 description: RNA helicase3
Sequence	ATGGCGTCCCTCGTCACGCTCCCCGCCATCGCCTTCTCTAACCCCGCCACAGCCTCCGGC GCTGTCCGCCTACGCGCCGCGGCCTTCCGCTGCTGGGCGCTCCGGCGGCGCGGGTGGGCG GTGGCGGCTGCCGTGGCCTCGCCCAACTCCGTGCTCAGCGAGCACGCCTTCAAGCGGCTC CAGCTCGGAAGTGACGACGAGGACGAAGAAGGGCCGTACGGGAGCGACGCCGACGAGGGG TTCCAGGGGGACGAGGAGGAGCTCGCCATTGCCAGGCTCGGCCTGCCCGACGAGCTCGTC GCCACGCTCGAGAAGCGCGGGATTACGCACCTGTTCCCCATACAGAGGGCTGTGTTGATT CCCGCTCTTGGGGGCCGTGACCTGATTGCTAGAGCAAAGACCGGAACCGGAAAGACACTT GCCTTTGGTATTCCCATGATCAAGCAATTAATGGAGCAAGACGATGGTCGGAGTACAAGG CGAGGTCGTACTCCTCGGGTTCTGGTTCTAGCACCTACCAGAGAGTTAGCCAAACAAGTC GAGAAGGAAATAAAGGAATCAGCACCCAAGCTTGGCACGGTGTGTGTTTATGGCGGTGTC TCGTATAATGTCCAGCAGAATGCACTCTCGCGTGGTGTCGATGTTGTTGTTGGCACACCT GGGCGCATAATTGATTTGATAAATGGCGGAAGCCTCCAGTTGGGAGAAGTTCAGTATTTA GTCCTGGATGAAGCTGACCAAATGCTTGCAGTGGGGTTTGAGGAAGATGTGGAAACAATA TTACAACAGCTTCCTGCGGACAGGCAAAGCATGCTGTTCTCTGCGACGATGCCTAGCTGG GTGAAGAAACTATCCAGGCGGTACTTGAACAATCCTTTGACGATTGACTTGGTTGGTGAT CAAGATGAAAAACTTGCTGAAGGAATCAAACTTCATGCCATCCCACTCACAGCGACGTCA AAGCGCACCATTCTTAGTGATCTAATTACGGTTTATGCAAAGGGTGGGAAAACCATTGTT TTCACTCGCACAAAGAAAGATGCAGATGAGGTATCATTGGCACTGACAACCAGTATTGCT TCTGAGGCACTTCATGGTGATATTTCACAGCATCAGCGTGAAAGGACACTAAATGGATTT CGTCAAGGGAAATTTACTGTTCTAGTAGCTACAGATGTTGCGGCCCGCGGTCTTGATATA CCAAATGTTGATTTGATTATCCATTACGAATTGCCAAACGATCCAGAAACTTTTGTCCAT CGTTCTGGACGCACTGGACGTGCTGGGAAAGCAGGAACTGCAATCTTGATGTTTACCAGC AGCCAGAAAAGGACAGTTATGTCACTTGAGCGTGATGTTGGTTGCAAGTTTGAGTTTATA AGCCCTCCGTCCATAGAAGAAGTGCTGGAGTCATCTGCTGAGCATGTCATTGCTACATTG CGAGGGGTGCACCCAGAGTCAACTCAATACTTTCTTGGAGCAGCTGAGAAATTAACAGAA GAACTAGGACCTCATGCCCTTGCTTCTGCACTGGCACATCTGAGTGGATTTTCTCAGCCA CCTTCTTCACGTTCTCTGATCAGTTATGAGCAGGGATGGGTGACATTGCAACTAACTAGA GAACCGGGATATGGCAGAGGCTTCTTTTCTCCTAGATCTGTTACTGGTTTTCTATCTGAT GTTTGTTCAGCTGCTGCAGATGAAGTTGGCAAAATATACATAACAGCAGATGAGAATGTC CAAGGAGCAGTCTTCGATTTACCTGAGGAAATTGCAAAGGACCTGCTTACTATGGAGGTC CCCCCGGGAAACACATTAACCAAAATTTCGAAGCTGCCTGCGTTGCAAGATGATAGTCCT GCTACTGATAGCTATGGTCGCTTTTCAAACGACCGAGGTTCCAGGAACAGGCGTTCCAGG GGTGGAGGTGCTTCAAGAGGCCGGGGTGGTTGGGACACCGACAGTGAGGACCGATACCGG CGTGGTGGCAGGAGCTTGAGGTCTGACAACGATAGTTGGTCAGATGATGACTGGTCAGGC GGTGGGAGAAAATCAAACCGTTCCTCCTCATCCTTTGGTGGCCGCTCATCATCCTACGGC AGCCGTGGCTCACCATCACCATCCTTCGGTGTCCGCTCATCATCCTTGGGCGGTAGGGAG AGCAGCAGAAGCTTCAGTGGCGCTTGTTTCAACTGCGGCGAATCCGGTCACCGTGCATCG GACTGCCCAAACAAGTAG

Peptide Sequence

PEP ID	Zm00001d012922_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:5:1978807:1993142:1 gene:Zm00001d012922 transcript:Zm00001d012922_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase3 description: RNA helicase3
Sequence	MASLVTLPAIAFSNPATASGAVRLRAAAFRCWALRRRGWAVAAAVASPNSVLSEHAFKRL QLGSDDEDEEGPYGSDADEGFQGDEEELAIARLGLPDELVATLEKRGITHLFPIQRAVLI PALGGRDLIARAKTGTGKTLAFGIPMIKQLMEQDDGRSTRRGRTPRVLVLAPTRELAKQV EKEIKESAPKLGTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYL VLDEADQMLAVGFEEDVETILQQLPADRQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGD QDEKLAEGIKLHAIPLTATSKRTILSDLITVYAKGGKTIVFTRTKKDADEVSLALTTSIA SEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVH RSGRTGRAGKAGTAILMFTSSQKRTVMSLERDVGCKFEFISPPSIEEVLESSAEHVIATL RGVHPESTQYFLGAAEKLTEELGPHALASALAHLSGFSQPPSSRSLISYEQGWVTLQLTR EPGYGRGFFSPRSVTGFLSDVCSAAADEVGKIYITADENVQGAVFDLPEEIAKDLLTMEV PPGNTLTKISKLPALQDDSPATDSYGRFSNDRGSRNRRSRGGGASRGRGGWDTDSEDRYR RGGRSLRSDNDSWSDDDWSGGGRKSNRSSSSFGGRSSSYGSRGSPSPSFGVRSSSLGGRE SSRSFSGACFNCGESGHRASDCPNK

Transcript Sequence

Transcript ID	Zm00001d012922_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:1978807:1993142:1 gene:Zm00001d012922 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase3 description: RNA helicase3
Sequence	GAACGCCATCCGTTCCATTTCTTATCCCCTCCCAGTCCCAGCCATCGCCTCCCGATGGCG TCCCTCGTCACGCTCCCCGCCATCGCCTTCTCTAACCCCGCCACAGCCTCCGGCGCTGTC CGCCTACGCGCCGCGGCCTTCCGCTGCTGGGCGCTCCGGCGGCGCGGGTGGGCGGTGGCG GCTGCCGTGGCCTCGCCCAACTCCGTGCTCAGCGAGCACGCCTTCAAGCGGCTCCAGCTC GGAAGTGACGACGAGGACGAAGAAGGGCCGTACGGGAGCGACGCCGACGAGGGGTTCCAG GGGGACGAGGAGGAGCTCGCCATTGCCAGGCTCGGCCTGCCCGACGAGCTCGTCGCCACG CTCGAGAAGCGCGGGATTACGCACCTGTTCCCCATACAGAGGGCTGTGTTGATTCCCGCT CTTGGGGGCCGTGACCTGATTGCTAGAGCAAAGACCGGAACCGGAAAGACACTTGCCTTT GGTATTCCCATGATCAAGCAATTAATGGAGCAAGACGATGGTCGGAGTACAAGGCGAGGT CGTACTCCTCGGGTTCTGGTTCTAGCACCTACCAGAGAGTTAGCCAAACAAGTCGAGAAG GAAATAAAGGAATCAGCACCCAAGCTTGGCACGGTGTGTGTTTATGGCGGTGTCTCGTAT AATGTCCAGCAGAATGCACTCTCGCGTGGTGTCGATGTTGTTGTTGGCACACCTGGGCGC ATAATTGATTTGATAAATGGCGGAAGCCTCCAGTTGGGAGAAGTTCAGTATTTAGTCCTG GATGAAGCTGACCAAATGCTTGCAGTGGGGTTTGAGGAAGATGTGGAAACAATATTACAA CAGCTTCCTGCGGACAGGCAAAGCATGCTGTTCTCTGCGACGATGCCTAGCTGGGTGAAG AAACTATCCAGGCGGTACTTGAACAATCCTTTGACGATTGACTTGGTTGGTGATCAAGAT GAAAAACTTGCTGAAGGAATCAAACTTCATGCCATCCCACTCACAGCGACGTCAAAGCGC ACCATTCTTAGTGATCTAATTACGGTTTATGCAAAGGGTGGGAAAACCATTGTTTTCACT CGCACAAAGAAAGATGCAGATGAGGTATCATTGGCACTGACAACCAGTATTGCTTCTGAG GCACTTCATGGTGATATTTCACAGCATCAGCGTGAAAGGACACTAAATGGATTTCGTCAA GGGAAATTTACTGTTCTAGTAGCTACAGATGTTGCGGCCCGCGGTCTTGATATACCAAAT GTTGATTTGATTATCCATTACGAATTGCCAAACGATCCAGAAACTTTTGTCCATCGTTCT GGACGCACTGGACGTGCTGGGAAAGCAGGAACTGCAATCTTGATGTTTACCAGCAGCCAG AAAAGGACAGTTATGTCACTTGAGCGTGATGTTGGTTGCAAGTTTGAGTTTATAAGCCCT CCGTCCATAGAAGAAGTGCTGGAGTCATCTGCTGAGCATGTCATTGCTACATTGCGAGGG GTGCACCCAGAGTCAACTCAATACTTTCTTGGAGCAGCTGAGAAATTAACAGAAGAACTA GGACCTCATGCCCTTGCTTCTGCACTGGCACATCTGAGTGGATTTTCTCAGCCACCTTCT TCACGTTCTCTGATCAGTTATGAGCAGGGATGGGTGACATTGCAACTAACTAGAGAACCG GGATATGGCAGAGGCTTCTTTTCTCCTAGATCTGTTACTGGTTTTCTATCTGATGTTTGT TCAGCTGCTGCAGATGAAGTTGGCAAAATATACATAACAGCAGATGAGAATGTCCAAGGA GCAGTCTTCGATTTACCTGAGGAAATTGCAAAGGACCTGCTTACTATGGAGGTCCCCCCG GGAAACACATTAACCAAAATTTCGAAGCTGCCTGCGTTGCAAGATGATAGTCCTGCTACT GATAGCTATGGTCGCTTTTCAAACGACCGAGGTTCCAGGAACAGGCGTTCCAGGGGTGGA GGTGCTTCAAGAGGCCGGGGTGGTTGGGACACCGACAGTGAGGACCGATACCGGCGTGGT GGCAGGAGCTTGAGGTCTGACAACGATAGTTGGTCAGATGATGACTGGTCAGGCGGTGGG AGAAAATCAAACCGTTCCTCCTCATCCTTTGGTGGCCGCTCATCATCCTACGGCAGCCGT GGCTCACCATCACCATCCTTCGGTGTCCGCTCATCATCCTTGGGCGGTAGGGAGAGCAGC AGAAGCTTCAGTGGCGCTTGTTTCAACTGCGGCGAATCCGGTCACCGTGCATCGGACTGC CCAAACAAGTAGATGGCGCATTCTTCCCTGCCCAAGCAAGTAGACAGCTCGAGCATCAGG ACGCACGCAGAGCGAAAACCCAAGCGCGCCCCTGATCGACCAGTATACTACGCCTGACAG CCAGCTACAGTTTTTGTGTGGCTGTCTCGTCAGGACTGAAGATTTTGGCATGCTGATTCC AGTTATTTAGATCCAGAGGAGTCCTTACTCTACAGGGATATGTTGAGTCTCAGTAGAATT GTGTAACCAGTAACCACACACACGAACAATGGCGGAGGACTAAAATATAAAATCATAGCT GGCATATTGAACACGTAACATATATTGCAGTTGGCATGGCTCTTTTCTTTTCCTTC