Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012918_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:5:1940961:1956957:1 gene:Zm00001d012918 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flap endonuclease 1
Sequence	ATGGGAATCAAGGGCTTGACGAAGCTGCTGGCGCAGCACGCACCGACAGCCGCGGTGCAG CGGCGGGTGGAGGACTACCGCGGCCGCGTCATCGCCGTAGACGCCAGCGTCAGCATCTAC CAGTTCCTCGCCGTGGTTGGAAGGAAAGGATCAGAGCTTCTGACCAATGAGGCTGGTGAA ATCACAAGTCATCTGCAGGGTATGTTGAACCGGACGATAAGAATGCTAGAAGCAGGGATA AAGCCCGTGTTTGTGTTTGATGGCGAGCCACCTGAAATGAAGAAAAAGGAGCTTGCAAAA AGGTCCTTGAAGAGGGATGATGCTATTAAAGATCTTAATAGAGCTATGGAGATTGGGGAT GAGAATGCAATTGAAAAATTTAGTAAAAGGACTGTCAAGGTTACAGGAAGGCATAATGAT GACTGCAAGAGGCTGTTAAGGTTGATGGGTGTCCCTGTAGTTGAGGCACCAGGTGAGGCT GAAGCACAGTGTGCAGCACTTTGTGAAAATCACCAGGTTTATGCTGTAGCTTCAGAGGAC ATGGACACACTGACTTTTGGTGCCCGAAGGTTTCTTCGTCACTTAACTGACCTTGGTTAT AAGAAATCTCCTGTGACAGAATTTGATGTGTCAAAGGTTTTGGAAGAACTTGGACTCACG ATGGATCAGTTCATTGACTTGTGTATCCTTAGTGGATGTGATTACTGTGAGAATATTAGA GGTATCGGAGGACAAAGAGCCTTGAAACTCATTCGTCAGCATGGTTGCATAGAAGAAGTT CTGCAAAATCTGAACCAGACGAGATTCAGTGTTCCAGAAGACTGGCCTTACCAGGAAGTT CGGACATTGTTTAAGGAACCTAATGTTTGTGCAGGAATTCCAGATTTCACGTGGACCTCA CCAGATCCAGAGGGCCTTATGGATTTCTTGTCAACAGAAAACAGTTTCAGTCCTGATAGA GTAACAAAGGCAGTAGAAAAGATAAAGGTTGCTAGGGATAGGTATTCCCCAGGCAGAATG AAGCATTTAACACCAGTTGCTAGCTTACGAGGATCTCATACTGAGAAGGAACCCCAGTGC ATACTAGGTTCTCCAGGACAAACTCTGAAGGTCATGTCATCTCCACAAGTATGCAAGAGT CCAAGCTCTGGTTTCAGATATGGTAGCTCAAAGCCATTTATGCTGGGCAGACAGTCAGGA TTTCATGGAATGCCTTATGCTCTCTCTTTTATCTAA

Peptide Sequence

PEP ID	Zm00001d012918_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:5:1940961:1956957:1 gene:Zm00001d012918 transcript:Zm00001d012918_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flap endonuclease 1
Sequence	MGIKGLTKLLAQHAPTAAVQRRVEDYRGRVIAVDASVSIYQFLAVVGRKGSELLTNEAGE ITSHLQGMLNRTIRMLEAGIKPVFVFDGEPPEMKKKELAKRSLKRDDAIKDLNRAMEIGD ENAIEKFSKRTVKVTGRHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCENHQVYAVASED MDTLTFGARRFLRHLTDLGYKKSPVTEFDVSKVLEELGLTMDQFIDLCILSGCDYCENIR GIGGQRALKLIRQHGCIEEVLQNLNQTRFSVPEDWPYQEVRTLFKEPNVCAGIPDFTWTS PDPEGLMDFLSTENSFSPDRVTKAVEKIKVARDRYSPGRMKHLTPVASLRGSHTEKEPQC ILGSPGQTLKVMSSPQVCKSPSSGFRYGSSKPFMLGRQSGFHGMPYALSFI

Transcript Sequence

Transcript ID	Zm00001d012918_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:1940961:1956957:1 gene:Zm00001d012918 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flap endonuclease 1
Sequence	GTCCCGAGGCGGGAAACTACACAGCGGAGCTTTCGCGGGGAGGCGGCGGCGGATCCGCGC TCGGTTCGCCTTGCCTTGCCGACGCCGCCGACGTGCCATGGGAATCAAGGGCTTGACGAA GCTGCTGGCGCAGCACGCACCGACAGCCGCGGTGCAGCGGCGGGTGGAGGACTACCGCGG CCGCGTCATCGCCGTAGACGCCAGCGTCAGCATCTACCAGTTCCTCGCCGTGGTTGGAAG GAAAGGATCAGAGCTTCTGACCAATGAGGCTGGTGAAATCACAAGTCATCTGCAGGGTAT GTTGAACCGGACGATAAGAATGCTAGAAGCAGGGATAAAGCCCGTGTTTGTGTTTGATGG CGAGCCACCTGAAATGAAGAAAAAGGAGCTTGCAAAAAGGTCCTTGAAGAGGGATGATGC TATTAAAGATCTTAATAGAGCTATGGAGATTGGGGATGAGAATGCAATTGAAAAATTTAG TAAAAGGACTGTCAAGGTTACAGGAAGGCATAATGATGACTGCAAGAGGCTGTTAAGGTT GATGGGTGTCCCTGTAGTTGAGGCACCAGGTGAGGCTGAAGCACAGTGTGCAGCACTTTG TGAAAATCACCAGGTTTATGCTGTAGCTTCAGAGGACATGGACACACTGACTTTTGGTGC CCGAAGGTTTCTTCGTCACTTAACTGACCTTGGTTATAAGAAATCTCCTGTGACAGAATT TGATGTGTCAAAGGTTTTGGAAGAACTTGGACTCACGATGGATCAGTTCATTGACTTGTG TATCCTTAGTGGATGTGATTACTGTGAGAATATTAGAGGTATCGGAGGACAAAGAGCCTT GAAACTCATTCGTCAGCATGGTTGCATAGAAGAAGTTCTGCAAAATCTGAACCAGACGAG ATTCAGTGTTCCAGAAGACTGGCCTTACCAGGAAGTTCGGACATTGTTTAAGGAACCTAA TGTTTGTGCAGGAATTCCAGATTTCACGTGGACCTCACCAGATCCAGAGGGCCTTATGGA TTTCTTGTCAACAGAAAACAGTTTCAGTCCTGATAGAGTAACAAAGGCAGTAGAAAAGAT AAAGGTTGCTAGGGATAGGTATTCCCCAGGCAGAATGAAGCATTTAACACCAGTTGCTAG CTTACGAGGATCTCATACTGAGAAGGAACCCCAGTGCATACTAGGTTCTCCAGGACAAAC TCTGAAGGTCATGTCATCTCCACAAGTATGCAAGAGTCCAAGCTCTGGTTTCAGATATGG TAGCTCAAAGCCATTTATGCTGGGCAGACAGTCAGGATTTCATGGAATGCCTTATGCTCT CTCTTTTATCTAAAATCTGTAGCTGCTCTGGTTTATGAGAAGGTTGACCGAAGCTGTAGC TGCGGCTACATTTTTAGATGATGGAAACCGATATCCGGCTTTCACCTCACTGGGAGGATA TGGCCAAGTAGCTGTAGCTGCAGCTACATGAAAGGATGCTCACTTATAATATGTTAATCT CGTGCTACTATTGTAATCTTTCCATTTCTATTGTAACGTAGTTAATCAGCTACTGCAGTT CATCGTTGACATCTAATGCTGGTTGCTGCTACACCGGTTGACCTTACCTTTTGTCAATAT ATTCTGAGTTTTCGGGATGGTGTTTTTAAACC