Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012913_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:5:1892038:1900546:-1 gene:Zm00001d012913 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperone DnaJ-domain superfamily protein
Sequence	ATGATTCTTGGAGGTGTTCTCTTTTTCTTGAAACGCGAAAGAATAACTCTTCTTGTTGCC TGTTTATATTCGATGTATTGCGCGAGATGCTATGTTGGATGGCTCGGATTGCTTTTGGGC CTCAACTTATCTTTCTTTTCTAGTGATATTCTAGTGCAGTTCCTAAGGGACAATGCAGAC AATAAAAAATTCAATGGTTCTTCAAGGTACTCAGAGCGAAGCTCTGGTAGACAAGGCAAT ATCTTTGAAGAATTTCAGCCATCAGCAAATAGCACCTACCAAGCCAGATATGCTCGAGCT TCAGATCGAGATCCTGGTGATCCTTCAACAAGTGGACCTGAGAAAGAGCTTACCTCTGAA GATGAAGTGGCTCGTTTACTGAACTGCACTGACCACTATTCAGCATTAGGTTTCCGTCGA TATGAGAACATAGATGTATCATCTCTTAAGAGAGAATACAAGAAAAAGGCTATGTTAGTC CATCCTGATAAGAATATGGGCAATGATAAAGCTGCTGATGCATTTAAAAAGCTTCAAAAT GCATATGAGATTCTTCTTGATTCACTGAAACGCAAGACATATGATGATGAGTTGAGGAGG GAAGACCTCTTGAACTACTTCAGGCAGAGTGTTTCTCAAAAGAATGGAAGAAACAGTACT TTCCAACATGGGTTCAGCCCTTCAGAAGGTGTTGATGAAGGTCCTTATGGTCTTTCCAGA AGAATAGCTTGTAAAAAGTGCAGCGACTTTCATCTTTGGATTTATACTGGAAGAGCTAAA TCACAAGCTAGATGGTGTCAGGACTGCAAGGAGTTCCATCAAGCTAAAGATGGCGATGGA TGGGTTGAACAGTCCTTTCAACCTGTTCTATTTGGCATGCTGCAGAAGCCTGATTTACCT CATGCATATGTTTGCGCAGAAAGCTACATATTTGATGTCACTGAGTGGTTCAACTGTCAG GGAATGAGATGCCCGGCGAACACTCACAAGGCAACCTTCCATGTCAATGCCAACATGGCA AAGCAGAGCAGTGGCAAGGCGAGTACCTCAACGCAGAGGGCTGGTAAGGCCCCAAGTGGT GTAAACATGGATGGAGGAGGACTCAACGAGGAAGAGTTCTTCGAGTGGTTCCAGAATGCA GTCAACTCTGGAATGTTTGAAACTACATTCGGGGCACAAGGCGACCCGACTTCTCCTGGT AACGGAAGCAATGCCAAGAGTAGCGGTAGCAGCAGCAGCAACAACAATAGTAGGAAAAAG AAGAAAGGAAAGAAACAGTGGTAA

Peptide Sequence

PEP ID	Zm00001d012913_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:5:1892038:1900546:-1 gene:Zm00001d012913 transcript:Zm00001d012913_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperone DnaJ-domain superfamily protein
Sequence	MILGGVLFFLKRERITLLVACLYSMYCARCYVGWLGLLLGLNLSFFSSDILVQFLRDNAD NKKFNGSSRYSERSSGRQGNIFEEFQPSANSTYQARYARASDRDPGDPSTSGPEKELTSE DEVARLLNCTDHYSALGFRRYENIDVSSLKREYKKKAMLVHPDKNMGNDKAADAFKKLQN AYEILLDSLKRKTYDDELRREDLLNYFRQSVSQKNGRNSTFQHGFSPSEGVDEGPYGLSR RIACKKCSDFHLWIYTGRAKSQARWCQDCKEFHQAKDGDGWVEQSFQPVLFGMLQKPDLP HAYVCAESYIFDVTEWFNCQGMRCPANTHKATFHVNANMAKQSSGKASTSTQRAGKAPSG VNMDGGGLNEEEFFEWFQNAVNSGMFETTFGAQGDPTSPGNGSNAKSSGSSSSNNNSRKK KKGKKQW

Transcript Sequence

Transcript ID	Zm00001d012913_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:1892038:1900546:-1 gene:Zm00001d012913 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperone DnaJ-domain superfamily protein
Sequence	GAAACCTAGAATTATTTTTTTCTCCCTTTGCAAAAATCATTGGGTGCACGTCCTTTACTG GGTATGCCCCTGTTTGAGAGCTGCTCTACTGAGCTCTGTAACATCAGGGAAGCAGAACTT AACTAGGTTTCAGTCATAATGTCAGATAAGTATGCGAGCTGCATTGTAGGAGCACGTCTA TCTGGTGGCTTAACTCCCTGTATGGAAATGCAGCTAGCTGTAATCCTGGACCCAGCCTCT ATATGAGACTGCACGCAACAGCTTATGTGGTACCCCAGGGCTTGAGAGAGAAAATGCTGG GCACAGTGATTGGCGTCGTGTACGTTTCTAGATAAGACATGCATGCATGCAGTACCGTTC GCTCCCACTTCGAGCACGTGGATGCACCATTCAGTGTCCAAGTCGACAAAACGCCAAGAA ACGTAAACTAGCTGTCCCCCACCTTAGTGGAGTACTTTGAACACGTACGGCTAGTTCTTT TATGTCATGCATGGGATAATTAATGAGAACACTTGTAAATGGTTGATCAACAAAATACCC CTCTAGCTCACCAACACCAACAGATTGATCAGAAAATCGTGCACACGTATAAAGACGACT CATTCTTTCATTCTATTATCATTCCATACGCTTGTATCAAATGTGAAGTTAAAAATTCAG ATTCTAAACTTGCAAGATTCCACTAGTTTTGCTCACTAGCAGGAACCTTCTCGGTAACAG GGACCCTGGGCTGGTAAAGTTCTATCATACGATGACAAGCTTTCTGTATTATGTCTAACA TATAGCTAGTGAACTTATTATTTCTCAGTCTCATTAAAAATGTCACACCTGAATGTGAGC ATCTTATTTGTAGAAGTATTCCTTTTATCTTCCAACTAACCATATCATCCATCCTGTTTT CTCATTTAGTTTTGTGGTATGTTTTGGTGCACCCATAGGTACTGATTTTGCTGAAGCAAC AGAATAATGTATTAGCCCTCATGCGTTAACACCTACATAAACTTTGAGTATCCTAGTTTC AAGTGAAATCATGGCACGAAAAGGAAATCAAAGTAAGAGTGGCCCCAATCATGCTTCACC TAAGTGGAAAAATACAACTGATGGTGATGCACTAAGTACACCAGAAAGAGGTGCTGCAGA TAGTGAAAATCCGAGTTCACATGTTCAAGGCAGATCAAAGGGTCCTGAAGGAAGCAGTGA GAAGAAAGGAAGAGGCAGCAAAAGGAACAGCACAAACAACGGCATATCATCCTCTGGAAA AAAACAACAAATGGACACCGGTTGTGATATAAACAGTTCAGAAGAAAAGGAGATTCCGGT AAGAGGTACTAAAAATAGAAGAGGTAGCCAGAAACCCTCTAGGCGCGGTTTTGGTAGAAG TTTTTTCATTGAGCAAACAACATCGTCTGGATTGGCAGGAAATGTTTTGGAGAAGACCAG GTGCATTGCTTGCATGGCTGCATCCATTATTAGAGCTTCCATGATATATCTAGTTGAAGA AGGCAAAAGATTTATCGAAAAAAGAATGCCAACAATCAACACTTATATGGCTTTTGTCAA CAAAGGGCATGCATATGTCTTAAGCAAAATTGCATATGTTTATCCCATAGTTCGAGCTTG GATGCTTAATGCTGGAAGGGTGATGCTGCTCTTGTTTACAGTTTGGTTAGACTGCAATGT AAGGGGCTTTGATTCTTTGCTACGATTGGGGACAAACTCTCTCCTAGCAGTACTTTGGTG CAGCACGCTGTCAACTTTTGCAATGATTGGGATAAAAAAGATGCTCATATTCATGGTATG GTTTAAGTATCCCTTAGGCTTCTGTTCAAATTTATTGACAATGCCAATGTGTACTAGCTT AATTTATGATATTTCTCCTAGTTACACAATACATGCAAGTAGATATTATATGGAAAGGTC GACAATGACCTTTTTATTTTTTCACATTTTTCAATACAGATCATTTTTTTCTAGAACACG CAAGAGAGCTGCACATCTTTATATTAGAGAGAGAGAGAAAAAAAAGGACTTACATCCAAG ACTACATCAGAAGGGCTAGGCTTCCCGCACTGTGCGGGGTCTGGGGAAGGGTATCTTTAA GCGCCAAGCCTTACCCGCACAATATGCAGAGGCTGGGGCTCGAACCCGGGATCTTCCGGT TACAGACGGTAGGCTTTACCGCTGCACCAGACCCGCCCTTCTCAAGACTACATCAGAAAA AGAAACAAAAGAAAAGCAAAAATTAAAAAACCAAAAAAGGTTACAGAGGATCATAAGGAA TGGATCCGATATTCCTCATGGAACTAGGGAAACCAAGCTGACCCAAACTCCTGGCGCCTG CCATGAGCCAACAGGAGAACTCGTCACTGAAATGCTGCTGCAACCTCTGAATGGATGGAC TAATCCCATCAAAGACCGTTCTGTTTCTATGCAGCCAGAAGCACCAAGCCCCCAAAATGA TGACACAATTGATCCATTTTCTCTTACCCTTCCTTGTAATCTTGTTGGCCTTCCTCCACC AGTCCTCAAACAACCTCTCATCAGCCCTAGGAGCGAGGTGACTCATCCCGAGAGAGTCAA AGATAAGAAACCAGAAATGCCGGGCAAAAACAAAAGTTGTGAGGATGTGCTGTATCGTCT CCCTTTCTTGGTCACACAAAGGACATCAGCTTGGGTGCTGCAATCCCCTCTTCTCCAGAT TATCAGCACCAAAGAAAGAATTTACGTTTTTGAGGAGTCCAAGACTTCCAAAGTCTTTTC CAGGGTTCAAAAACAATAGACCCCCAGATATGTTTATCAGCTTCCTCGGTGAGAACCACA TTCTCCAATAAATCCCAAAGAATAAGGTACTGGTGAATGCCATTGATGGTGAGCACTGGC TTGATATCTGCAACCCAGCTACGGTTAGAAAGACATTGAGCCACTGTTCTAGAGTCAGCC ACCTTAGGCACCACCACAGCAGCAACCTCTGGTGCCAAATCAGCAATGGTCTTCCCATTA AGCTAACGATCTTTCCAAAAAATGTGTTTTGCCCGTGGCCCACCAAAGCCACCACGGAGA TGGCAAAAAAACCGCGGACTTGCTTCTGGACATTGAACTCTAAACCGTAACATGGTTTAG AAGGGTATGCTTTGTGGAACCAAAGCCATCTGAGTTGCAATGCCCAGCCCATGAATGGAA GATTTGGCACTCCAAGACCCCCTAGACACCGAGGTCGTGTCACTATATCCCATGCCACCA AACAGCTACCTCCATTGACCTCCTTCCGACCTTTCCAAAGAAAAGCCCTTCTAATCTAAT CAATAGCTTTGATTACCCAACTGGGAACATTAGCAGATAAACTGGAATAGCAGATAAGAC TGAATTGACAAGGGTTGCTCTTCCAGCCAAATTAAGGAGATTAGCATTCCAGCTTGGAAG TCTATCAGCAATCTTCTCTACCCAGTTAAGGAGATCTGATCTTTTAAGCTTCCAGTTGGA AATGGGGAGTCCCAAATATTTGCAAGGGAAGGACCCAATAGTGCAGTGAAGGGAGCAGGA GATGACATGTAGCTCTGCATCATTACATCTTATAGGAATAGGCAAACTCTTTTCCATATT GACTTTCAGCCCCGAGGCTTCACCAAAGCAGTCTAAAATGACCTTAGTGCAACTTAATTC CTCTTCCTCTGGTTTAATGAATAGGAACACGTCGTTAGCATATATGGAGATTCTATTCTT GACGTTGTTGGGCTTATTAACCTCAGTAATGAAAATGCATTTTGCTTGTCAATTAACATG CGTGAGCAACCTCAGTAATTGCATATTGCTAGCAAGACCTTTAGAGCAAGAAAATTGTTT ATGATGGCAACACTTGTACATTATCTTCTCTTTTGTATGGTTTAATGAAAGTTTTAGCTC TACTACCCTTTGTTTGACCTCACATTTTTGTGCTTTCAGTATTATGATGATATACACCTG CTTACAGTAAATGTTGACCTTAGAATTGCCAATCTGCTGCTCACCAACATTTCATTAGTC ATTACTTTGGTTTCTTGATTAACTGGCTGCAACACAGCATACTAGTAATGAAATCCAGGT TTCTCATTGTGGAAAAAAAAACACAGCATACTGCATCTGTGGTAGAGGAAAACTTCATAG ATGATCTTGGTCAATGGTCATTATTCCCAGATATTAAAAAATGAATTTAGTTGCCATGCA ACATGTATCATTCACATTCAATGTTCATATGAGCCTGCATTGTAAGCGCCCAATCTTATT TCATCTCATCTCATATTTTGTTTACTAATTTTACCGATTTCTCAATTATGATAAATGCTA ATATAATTCAAAATGCTTTGCATGAACTGAAAATCAAAGTCTGGTATCAGTTAGTAACTT GATATAATTATTATCTATTATATTATTCTATCACTAGATTAATCTTCTCTTGTCTCATGG TTGTAAATCAGTAAATGAGGTTTTCACTAAAAAAGTTCCATTGTCAGATTACTTTGCTAG GTAAATTATGTCTGGTTTTGTTTTAAATTGTCTTTGCTCTTGCCATGCTGTTTCTTGTTT AAATCATTAATTGTTATGCTCATTGTAACTTGTCATTCTTTTCATCTTTGCTACTATCTT TTTTCAGGCGATTGCAGCTTCTGCGTTTGCCTTCATAGGTCTAGGTTTTGCTATCCTGCT TATATCAGTGCTTGCAGTGGTAATCTTATGGTTTTATGGAAGTTTTTGGACGACCACTTG TGTAATGATTCTTGGAGGTGTTCTCTTTTTCTTGAAACGCGAAAGAATAACTCTTCTTGT TGCCTGTTTATATTCGATGTATTGCGCGAGATGCTATGTTGGATGGCTCGGATTGCTTTT GGGCCTCAACTTATCTTTCTTTTCTAGTGATATTCTAGTGCAGTTCCTAAGGGACAATGC AGACAATAAAAAATTCAATGGTTCTTCAAGGTACTCAGAGCGAAGCTCTGGTAGACAAGG CAATATCTTTGAAGAATTTCAGCCATCAGCAAATAGCACCTACCAAGCCAGATATGCTCG AGCTTCAGATCGAGATCCTGGTGATCCTTCAACAAGTGGACCTGAGAAAGAGCTTACCTC TGAAGATGAAGTGGCTCGTTTACTGAACTGCACTGACCACTATTCAGCATTAGGTTTCCG TCGATATGAGAACATAGATGTATCATCTCTTAAGAGAGAATACAAGAAAAAGGCTATGTT AGTCCATCCTGATAAGAATATGGGCAATGATAAAGCTGCTGATGCATTTAAAAAGCTTCA AAATGCATATGAGATTCTTCTTGATTCACTGAAACGCAAGACATATGATGATGAGTTGAG GAGGGAAGACCTCTTGAACTACTTCAGGCAGAGTGTTTCTCAAAAGAATGGAAGAAACAG TACTTTCCAACATGGGTTCAGCCCTTCAGAAGGTGTTGATGAAGGTCCTTATGGTCTTTC CAGAAGAATAGCTTGTAAAAAGTGCAGCGACTTTCATCTTTGGATTTATACTGGAAGAGC TAAATCACAAGCTAGATGGTGTCAGGACTGCAAGGAGTTCCATCAAGCTAAAGATGGCGA TGGATGGGTTGAACAGTCCTTTCAACCTGTTCTATTTGGCATGCTGCAGAAGCCTGATTT ACCTCATGCATATGTTTGCGCAGAAAGCTACATATTTGATGTCACTGAGTGGTTCAACTG TCAGGGAATGAGATGCCCGGCGAACACTCACAAGGCAACCTTCCATGTCAATGCCAACAT GGCAAAGCAGAGCAGTGGCAAGGCGAGTACCTCAACGCAGAGGGCTGGTAAGGCCCCAAG TGGTGTAAACATGGATGGAGGAGGACTCAACGAGGAAGAGTTCTTCGAGTGGTTCCAGAA TGCAGTCAACTCTGGAATGTTTGAAACTACATTCGGGGCACAAGGCGACCCGACTTCTCC TGGTAACGGAAGCAATGCCAAGAGTAGCGGTAGCAGCAGCAGCAACAACAATAGTAGGAA AAAGAAGAAAGGAAAGAAACAGTGGTAATCAAAGCAAAGCAGGCTGGGGTCTGGTGATCA CTTCTCGGGGCAGAGAAAAAAAGAAACAAACAGAATAAGCGTTTTGGGTATGTAAATACA ACTCGGAAAAATCGGTCCCTGGCTTAAATGGTTCCTAACGAGAGGCCACT