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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012869_T034
CDS Infomation

cds chromosome:B73_RefGen_v4:5:1394068:1397493:1 gene:Zm00001d012869 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase kappa
Sequence

ATGAGGGTTAACCCACATACACACCAACTCAAAATTTGCGATTTCGGAAGTGCTAAAGTA
TTGGTCAGAGGAGAGCCAAACATCTCCTACATATGCTCAAGGTATTATCGAGCACCAGAG
CTCATATTTGGTGCAACGGAATATACTACTGCTATTGATTTGTGGTCAACAGGCTGTGTC
ATGGCAGAGCTGCTTCTAGGACAGGCTCTGTTTCCTGGAGAAAGTGGAGTCGACCAACTA
GTTGAGATCATCAAGGTTTTGGGTACTCCAACAAGGGAAGAGATCAAGTGCATGAACCCA
AACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAGGTTTTTCAA
AGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTTCTACAATACTCACCAAAT
CTACGGTGCACTGCTTTGGAGGCCTGTATGCACCCTTTCTTCGATGAGCTGAGAGACCCA
AACACTCGTCTACCCAATGGTCGGCCTCTGCCGCCTCTCTTCAACTTCAGATCTCAAGCT
AAAACTGATCAGATGTTTGCAATACTGACAGAGCTAAAAGGCGTTCCCCCAGAAGTCATC
GATCGCCTTGTCCCAGAGCACTCAAGAAGGCAGAGTTTGTTCATGGCGCTAAGGACCTAG

Peptide Sequence

PEP ID

Zm00001d012869_P034
PEP Infomation

pep chromosome:B73_RefGen_v4:5:1394068:1397493:1 gene:Zm00001d012869 transcript:Zm00001d012869_T034 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase kappa
Sequence

MRVNPHTHQLKICDFGSAKVLVRGEPNISYICSRYYRAPELIFGATEYTTAIDLWSTGCV
MAELLLGQALFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFQ
RRLPPEAVDLVSRFLQYSPNLRCTALEACMHPFFDELRDPNTRLPNGRPLPPLFNFRSQA
KTDQMFAILTELKGVPPEVIDRLVPEHSRRQSLFMALRT

Transcript Sequence

Transcript ID

Zm00001d012869_T034
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:1394068:1397493:1 gene:Zm00001d012869 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase kappa
Sequence

ATGAGGGTTAACCCACATACACACCAACTCAAAATTTGCGATTTCGGAAGTGCTAAAGTA
TTGGTCAGAGGAGAGCCAAACATCTCCTACATATGCTCAAGGTATTATCGAGCACCAGAG
CTCATATTTGGTGCAACGGAATATACTACTGCTATTGATTTGTGGTCAACAGGCTGTGTC
ATGGCAGAGCTGCTTCTAGGACAGGCTCTGTTTCCTGGAGAAAGTGGAGTCGACCAACTA
GTTGAGATCATCAAGGTTTTGGGTACTCCAACAAGGGAAGAGATCAAGTGCATGAACCCA
AACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAGGTTTTTCAA
AGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTTCTACAATACTCACCAAAT
CTACGGTGCACTGCTTTGGAGGCCTGTATGCACCCTTTCTTCGATGAGCTGAGAGACCCA
AACACTCGTCTACCCAATGGTCGGCCTCTGCCGCCTCTCTTCAACTTCAGATCTCAAGCT
AAAACTGATCAGATGTTTGCAATACTGACAGAGCTAAAAGGCGTTCCCCCAGAAGTCATC
GATCGCCTTGTCCCAGAGCACTCAAGAAGGCAGAGTTTGTTCATGGCGCTAAGGACCTAG