Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012858_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:1169600:1180147:1 gene:Zm00001d012858 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein prenylyltransferase superfamily protein
Sequence

ATGGCGGCGGCGGCGGCGGTTGCGTCTGCGACGACGGCGGAAGACGAAGCGCGCCTGCTG
CGCCTGGAGGAGCAGGCGGAGCACGGCGGCGGCGGCGCCTGGGAATACCTCTGCCTCGCC
CGCCGGCTCCGCGCCCGCCGCCCCGCTCACGTCCTCCGCGTCGGCCTCGCCCTCCTCAAC
AACGCCTCCGCGCGCTCCGGCCTTGCCTCAGAACAGTGGACGCTCTACGAGCAGGTGGCC
ACGGCGGCCATGGATTGCCAGCGTCTCGATGTGGCAAAGGACTGTATTGGAGTCCTTTCA
AAACAATTTCCTGGGAGCACACGGGTTGCCCGGCTAGAAGCTCGTCTGTTTGAAGCAAAA
GGTGAATGGGCTGAAGCTGAAAGAGCCTACGCGCTAATCCTGGAAAACAATCCATTTGAC
CAGATTGTCCACAAGAGGAAAATTGCTATCGCAAAAGCACAAGGTGGTATGTCGATAGTG
ATTGATTATCTCAATAAGTATCTGGAATTGTTTATGGCTGATCATGATGCTTGGAGAGAA
CTTGCTGAAACATACAGTTCCTTACAAATGTACAAGCAAGCTGCCTTTTGTTATGAGGAG
CTAATATTAGCCCAACCAACTATTCCACTATATCATATAGCCTACGCTGAGGTTCTGTAC
ACTATGGGTGGCTTGGAAAATCTCCAAACAGCTAAGAAGTATTATGCATCAACAATCCAG
TTAACTGGAGGCAAGAATACAAGAGCCCTCTTTGGTGTATGTCTGTGTACTTCGGCAATC
AATCAGTTGACGAAAGGAAGGAATAAAGAGGAAGAGGACTCGGAGCTGCAGAGCTTGGCT
GCAGAGGTACTGCTGAAGAATTACAAGCAGCAGGCTCCATCAAAGGCGCCCCTTATCAGC
AGCATGTTGAAGAACATGAAACTCAGCTGA

Peptide Sequence

PEP ID

Zm00001d012858_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:1169600:1180147:1 gene:Zm00001d012858 transcript:Zm00001d012858_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein prenylyltransferase superfamily protein
Sequence

MAAAAAVASATTAEDEARLLRLEEQAEHGGGGAWEYLCLARRLRARRPAHVLRVGLALLN
NASARSGLASEQWTLYEQVATAAMDCQRLDVAKDCIGVLSKQFPGSTRVARLEARLFEAK
GEWAEAERAYALILENNPFDQIVHKRKIAIAKAQGGMSIVIDYLNKYLELFMADHDAWRE
LAETYSSLQMYKQAAFCYEELILAQPTIPLYHIAYAEVLYTMGGLENLQTAKKYYASTIQ
LTGGKNTRALFGVCLCTSAINQLTKGRNKEEEDSELQSLAAEVLLKNYKQQAPSKAPLIS
SMLKNMKLS

Transcript Sequence

Transcript ID

Zm00001d012858_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:1169600:1180147:1 gene:Zm00001d012858 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein prenylyltransferase superfamily protein
Sequence

GAATGCCCAGTCCTGAATCACGTCTTCACCCGTGCTCGTGCGCTGCGCCCATCCCTTCCG
CCTCCACGCTCCCCACGTGCACCGTGCACAGCACCACACAGCCAGGTCCCCATGGCGGCG
GCGGCGGCGGTTGCGTCTGCGACGACGGCGGAAGACGAAGCGCGCCTGCTGCGCCTGGAG
GAGCAGGCGGAGCACGGCGGCGGCGGCGCCTGGGAATACCTCTGCCTCGCCCGCCGGCTC
CGCGCCCGCCGCCCCGCTCACGTCCTCCGCGTCGGCCTCGCCCTCCTCAACAACGCCTCC
GCGCGCTCCGGCCTTGCCTCAGAACAGTGGACGCTCTACGAGCAGGTGGCCACGGCGGCC
ATGGATTGCCAGCGTCTCGATGTGGCAAAGGACTGTATTGGAGTCCTTTCAAAACAATTT
CCTGGGAGCACACGGGTTGCCCGGCTAGAAGCTCGTCTGTTTGAAGCAAAAGGTGAATGG
GCTGAAGCTGAAAGAGCCTACGCGCTAATCCTGGAAAACAATCCATTTGACCAGATTGTC
CACAAGAGGAAAATTGCTATCGCAAAAGCACAAGGTGGTATGTCGATAGTGATTGATTAT
CTCAATAAGTATCTGGAATTGTTTATGGCTGATCATGATGCTTGGAGAGAACTTGCTGAA
ACATACAGTTCCTTACAAATGTACAAGCAAGCTGCCTTTTGTTATGAGGAGCTAATATTA
GCCCAACCAACTATTCCACTATATCATATAGCCTACGCTGAGGTTCTGTACACTATGGGT
GGCTTGGAAAATCTCCAAACAGCTAAGAAGTATTATGCATCAACAATCCAGTTAACTGGA
GGCAAGAATACAAGAGCCCTCTTTGGTGTATGTCTGTGTACTTCGGCAATCAATCAGTTG
ACGAAAGGAAGGAATAAAGAGGAAGAGGACTCGGAGCTGCAGAGCTTGGCTGCAGAGGTA
CTGCTGAAGAATTACAAGCAGCAGGCTCCATCAAAGGCGCCCCTTATCAGCAGCATGTTG
AAGAACATGAAACTCAGCTGATACCAACCAGCTCCACACATTCAGAGTGGCCTGATTTGA
TAGATAGTTAAGTTAAATTGATGTGGCTTAATATATGCTTGTTTTTTTATATATAAAAAA
ATTGTGGCACCAACATTGTGCAAGGCTTAAAAGTAGATGCTCCCAAGGCCATGGGTTGTA
CAACACCTGCTTGCTTACCTCGAAATATGCATGGCTTCTTCAGTGGATGTTCTACTATAT
AGATCAACAAACCCCCGATTGTACTTGAGCACAAACAAAATTTTGAATCAGTCGCTGGTG
AAGTTGTACGTGTTGATTTT