Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012836_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:969717:971009:1 gene:Zm00001d012836 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence

ATGCAGATGACCCGGCTGGAAGACCTGACCCCTGCTCCATCCATGGAGCATTCCTCGAGG
CCGACCCTGGGGTTTCCCCTGGGAACTGCTCTCCTGCTCCTCGTCATCTTTGCCCTGAGC
GGCATGTTCTCGTGTTGCTACCACTGGGACAAGCTCCGCGCCCTCCTCCGGTCTCGGCAT
CCCGACATGTTCCTGGAGGCCGAGGAGCATACGGCCGTCTCCGTGGCGTCGTCATCGCCG
CCGAGAAAGGCGGTTTCTGGTCACAAGCTGGAGAGATCGGGGGAAGAGCGCGGTGTGCCC
GTTATTATTATGCCTGGAGACAAGGTCCCCAAGTTCTTGGCGATGGCGAGGCCCAGCCCT
CGCGGCCCCGAAGCAGCAGCAGAGAAGACCACCGAATGTCGGGATCATCAGGAACCCTCC
GTCAGTATCTGTATACATGATGAAAGCACAGTTAGCTGTTAG

Peptide Sequence

PEP ID

Zm00001d012836_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:969717:971009:1 gene:Zm00001d012836 transcript:Zm00001d012836_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence

MQMTRLEDLTPAPSMEHSSRPTLGFPLGTALLLLVIFALSGMFSCCYHWDKLRALLRSRH
PDMFLEAEEHTAVSVASSSPPRKAVSGHKLERSGEERGVPVIIMPGDKVPKFLAMARPSP
RGPEAAAEKTTECRDHQEPSVSICIHDESTVSC

Transcript Sequence

Transcript ID

Zm00001d012836_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:969717:971009:1 gene:Zm00001d012836 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence

AAACCAGACCAGAAAGAAGGCAGGTGAGGTGAGGTGATGCAGATGACCCGGCTGGAAGAC
CTGACCCCTGCTCCATCCATGGAGCATTCCTCGAGGCCGACCCTGGGGTTTCCCCTGGGA
ACTGCTCTCCTGCTCCTCGTCATCTTTGCCCTGAGCGGCATGTTCTCGTGTTGCTACCAC
TGGGACAAGCTCCGCGCCCTCCTCCGGTCTCGGCATCCCGACATGTTCCTGGAGGCCGAG
GAGCATACGGCCGTCTCCGTGGCGTCGTCATCGCCGCCGAGAAAGGCGGTTTCTGGTCAC
AAGCTGGAGAGATCGGGGGAAGAGCGCGGTGTGCCCGTTATTATTATGCCTGGAGACAAG
GTCCCCAAGTTCTTGGCGATGGCGAGGCCCAGCCCTCGCGGCCCCGAAGCAGCAGCAGAG
AAGACCACCGAATGTCGGGATCATCAGGAACCCTCCGTCAGTATCTGTATACATGATGAA
AGCACAGTTAGCTGTTAGCATGATTTGATCGAGTGTATATATGTGCAATTTGCTTGCTTG
CTAACACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGTGTTAAACT
AGATAGAGTTTGAAAGGACAAAAACAGTCCTAGCTAGCTAGGTAACTGGCTGTTGTTGAA
TGCTACTGTACCCAGCCTGTAATCCAAAGAGCAAAGGGGGCTAGTGAAGAAGAATGTTCT
TTTATTTATGCTCTTTAATTGGAGCATGGATCAGTCCTATGGAAGAAGAAGCTATTTATT
GTTAGGTATTTGTTGGTGCCGTGCACGTATGTTGTGTGCACGCATTTTGTCGGGGGACTA
AAAGCAAAGCAAAGCAAAGGGCACTATCACCAAGTGAATGCTCTGAAAGAAAAGAAAAAG
AAAAGGAATGCAGCATGCATGCACTTGCACTGAGCCACTAAGGATCATCAGGGGACATCG
GCCTAACATCGATCGCAAACAATGACTCCCTTCCACTGAATCTGTGTCTCCGATGGCGGC
TTGGCAGGGCTTATTTGGGTGGGCGTCCAATCATCATGGATGTAGGACCATAACAATATC
TTCAGCACTCGTCTATACCTTTACTTTACGGTTTACTCTAAAATATTCTCTCTTTTATAT
CATGTTTCTTTTCAACAATGTTCTCTATATCTCGCTCTCTATACGTAAATACCTATATTA
AAGAC