Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012831_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:953000:956110:1 gene:Zm00001d012831 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cleavage and polyadenylation specificity factor subunit 3-I
Sequence	ATGGCGGCCTCCGCCGCGGCGCCGAGCGGCGCGCCACCGGCTGGGAAGCGCCCGGCCTCC AGCGGACGGGAGGGAGACCAGATGGTCATCACGCCGCTGGGCGCCGGCAGCGAAGTCGGC CGTTCGTGCGTCCACATGACCTTCAAGGGGCGTACTGTCCTCTTCGACTGCGGCATCCAC CCGGCGTACACCGGCATGGCGGCGCTGCCCTACTTCGACGAGATCGATCCGTCCGCCATA GACGTCCTCCTCATCACCCACTTTCACTTGGACCACGCCGCATCGCTGCCGTACTTCCTG GAGAAGACTACGTTTAAGGGCCGTGTGTTTATGACTCACGCCACAAAGGCTATTTACAAG CTGCTGCTCTCGGATTATGTCAAAGTCAGCAAGGTGTCCGTGGAGGATATGCTGTTTGAT GAGAGTGATATTGCTCGATCCATGGAGAAAATCGAGGTTATAGATTTCCACCAGACGTTG GAAGTTAATGGGATACGCTTCTGGTGCTACACTGCTGGCCATGTACTTGGTGCCGCTATG TTCATGGTGGATATTGCTGGCGTGCGCATTCTTTACACTGGTGACTACTCCCGTGAAGAA GACCGTCACCTACGAGCTGCTGAGCTCCCACAGTTCTCCCCAGACATTTGCATTATCGAG TCCACTTACGGCGTACAGCAACATCAGCCCCGGATTGTACGTGAGAAGCGCTTTACTGAG GTCATTCACAATACCGTTTCACAGGGGGGCCGTGTTCTTATCCCGGCATTTGCTCTGGGC AGAGCACAAGAACTGTTACTTATCCTCGATGAGTATTGGTCCAAACACCCAGAGCTCCAT AAGATTCCTATCTATTATGCGTCCCCTCTTGCCAAGAGGTGCATGGCTGTCTACCAGACA TACATAAACTCCATGAATGAAAGGATAAGGAACCAGTTTGCGCAATCCAACCCGTTCCAT TTCAAGCACATCGAGTCCTTGAATAGCATCGATAACTTCCACGATGTGGGTCCATCAGTG GTGATGGCTAGTCCAAGTGGCCTCCAGAGTGGTCTCTCCAGGCAGCTTTTTGATAAGTGG TGCACAGATAAGAGGAATGCATGTGTTATTCCAGGTTACGTTGTGGAGGGGACCCTTGCG AAGACCATTATCAACGAGCCAAGAGAAGTGGCGCTAGCTAATGGCCTCACTGCTCCTCTT CATATGTCGGTCCACTATATCTCGTTTTCAGCTCATGCTGATTTCCCTCAGACAAGCAAC TTTCTGGACGAACTTCGGCCTCCAAATATTATTCTCGTGCATGGAGAAGCGAATGAAATG TCGAGGCTTAAGCAGAAACTTATTACTCAGTTCGATGGCACAAATACGAAAATCGTGTCT CCCAAGAACTGCCAGTCAGTGGAGATGTATTTCACCTGTGAGAAAATGGCCAAGACTATC GGCAGGCTGGCAGAAAAGGTACCAGAAGCTGGAGAGTCTTCCGGTGGCCTACTCGTGAAG AAGGGATTCACATACCAGATCATGGCTCCTGAAGATCTCCGTGTGTTCACGCAGTTATCT ACAGCTAACATCATGCAGCGCATCGCGGTACCTTACTGTGGTTCCTTTGAAGTCATAAGG TACAGACTGGAGCAGATATACGAGAGCGTGGAGCCAGCGGCGGAAGAATCCGATGTTCCA GCGCTGATCGTGCACGGAAGAGTGACGGTTCGCCTGGACTCAGAAAGCTATGTCACGCTG CAGTGGCTGTCCGACCCCATCAGCGATATGGTGTCTGATTCTGTGGTGGCTATGATCTTG AACGTCGGTCGTGAAGGTCCCAAAGTTGTTCCGGTGGAAGGAGCAGTGAAGACCAAAGAG GAGACGGCTCAAAAGGTGGTGTATGCTCTTATGGCTTCACTTTTCGGTGATGTTAAAGTT GTGGAGGAAGGGAGACTTGTCATATCTGTGGATGGAAATGTGGCACACTTGGACGGGAGG AGTGGCTATGTGGAATGTGAGAATGCTACACTGAAGGAACGGATCAAGACTGCGTTCCGC CGCATACAGGGTGCCGTGAGACCAATCCCACTTGCCTCCTCTTGA

Peptide Sequence

PEP ID	Zm00001d012831_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:953000:956110:1 gene:Zm00001d012831 transcript:Zm00001d012831_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cleavage and polyadenylation specificity factor subunit 3-I
Sequence	MAASAAAPSGAPPAGKRPASSGREGDQMVITPLGAGSEVGRSCVHMTFKGRTVLFDCGIH PAYTGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYK LLLSDYVKVSKVSVEDMLFDESDIARSMEKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAM FMVDIAGVRILYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQQHQPRIVREKRFTE VIHNTVSQGGRVLIPAFALGRAQELLLILDEYWSKHPELHKIPIYYASPLAKRCMAVYQT YINSMNERIRNQFAQSNPFHFKHIESLNSIDNFHDVGPSVVMASPSGLQSGLSRQLFDKW CTDKRNACVIPGYVVEGTLAKTIINEPREVALANGLTAPLHMSVHYISFSAHADFPQTSN FLDELRPPNIILVHGEANEMSRLKQKLITQFDGTNTKIVSPKNCQSVEMYFTCEKMAKTI GRLAEKVPEAGESSGGLLVKKGFTYQIMAPEDLRVFTQLSTANIMQRIAVPYCGSFEVIR YRLEQIYESVEPAAEESDVPALIVHGRVTVRLDSESYVTLQWLSDPISDMVSDSVVAMIL NVGREGPKVVPVEGAVKTKEETAQKVVYALMASLFGDVKVVEEGRLVISVDGNVAHLDGR SGYVECENATLKERIKTAFRRIQGAVRPIPLASS

Transcript Sequence

Transcript ID	Zm00001d012831_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:953000:956110:1 gene:Zm00001d012831 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cleavage and polyadenylation specificity factor subunit 3-I
Sequence	GTCTGCTGGAGCCTAGAATCCTGAATTCCTGACCCGGTCTGCCGATTCAGGAAGAGGGAA TTCCATGGCGGCCTCCGCCGCGGCGCCGAGCGGCGCGCCACCGGCTGGGAAGCGCCCGGC CTCCAGCGGACGGGAGGGAGACCAGATGGTCATCACGCCGCTGGGCGCCGGCAGCGAAGT CGGCCGTTCGTGCGTCCACATGACCTTCAAGGGGCGTACTGTCCTCTTCGACTGCGGCAT CCACCCGGCGTACACCGGCATGGCGGCGCTGCCCTACTTCGACGAGATCGATCCGTCCGC CATAGACGTCCTCCTCATCACCCACTTTCACTTGGACCACGCCGCATCGCTGCCGTACTT CCTGGAGAAGACTACGTTTAAGGGCCGTGTGTTTATGACTCACGCCACAAAGGCTATTTA CAAGCTGCTGCTCTCGGATTATGTCAAAGTCAGCAAGGTGTCCGTGGAGGATATGCTGTT TGATGAGAGTGATATTGCTCGATCCATGGAGAAAATCGAGGTTATAGATTTCCACCAGAC GTTGGAAGTTAATGGGATACGCTTCTGGTGCTACACTGCTGGCCATGTACTTGGTGCCGC TATGTTCATGGTGGATATTGCTGGCGTGCGCATTCTTTACACTGGTGACTACTCCCGTGA AGAAGACCGTCACCTACGAGCTGCTGAGCTCCCACAGTTCTCCCCAGACATTTGCATTAT CGAGTCCACTTACGGCGTACAGCAACATCAGCCCCGGATTGTACGTGAGAAGCGCTTTAC TGAGGTCATTCACAATACCGTTTCACAGGGGGGCCGTGTTCTTATCCCGGCATTTGCTCT GGGCAGAGCACAAGAACTGTTACTTATCCTCGATGAGTATTGGTCCAAACACCCAGAGCT CCATAAGATTCCTATCTATTATGCGTCCCCTCTTGCCAAGAGGTGCATGGCTGTCTACCA GACATACATAAACTCCATGAATGAAAGGATAAGGAACCAGTTTGCGCAATCCAACCCGTT CCATTTCAAGCACATCGAGTCCTTGAATAGCATCGATAACTTCCACGATGTGGGTCCATC AGTGGTGATGGCTAGTCCAAGTGGCCTCCAGAGTGGTCTCTCCAGGCAGCTTTTTGATAA GTGGTGCACAGATAAGAGGAATGCATGTGTTATTCCAGGTTACGTTGTGGAGGGGACCCT TGCGAAGACCATTATCAACGAGCCAAGAGAAGTGGCGCTAGCTAATGGCCTCACTGCTCC TCTTCATATGTCGGTCCACTATATCTCGTTTTCAGCTCATGCTGATTTCCCTCAGACAAG CAACTTTCTGGACGAACTTCGGCCTCCAAATATTATTCTCGTGCATGGAGAAGCGAATGA AATGTCGAGGCTTAAGCAGAAACTTATTACTCAGTTCGATGGCACAAATACGAAAATCGT GTCTCCCAAGAACTGCCAGTCAGTGGAGATGTATTTCACCTGTGAGAAAATGGCCAAGAC TATCGGCAGGCTGGCAGAAAAGGTACCAGAAGCTGGAGAGTCTTCCGGTGGCCTACTCGT GAAGAAGGGATTCACATACCAGATCATGGCTCCTGAAGATCTCCGTGTGTTCACGCAGTT ATCTACAGCTAACATCATGCAGCGCATCGCGGTACCTTACTGTGGTTCCTTTGAAGTCAT AAGGTACAGACTGGAGCAGATATACGAGAGCGTGGAGCCAGCGGCGGAAGAATCCGATGT TCCAGCGCTGATCGTGCACGGAAGAGTGACGGTTCGCCTGGACTCAGAAAGCTATGTCAC GCTGCAGTGGCTGTCCGACCCCATCAGCGATATGGTGTCTGATTCTGTGGTGGCTATGAT CTTGAACGTCGGTCGTGAAGGTCCCAAAGTTGTTCCGGTGGAAGGAGCAGTGAAGACCAA AGAGGAGACGGCTCAAAAGGTGGTGTATGCTCTTATGGCTTCACTTTTCGGTGATGTTAA AGTTGTGGAGGAAGGGAGACTTGTCATATCTGTGGATGGAAATGTGGCACACTTGGACGG GAGGAGTGGCTATGTGGAATGTGAGAATGCTACACTGAAGGAACGGATCAAGACTGCGTT CCGCCGCATACAGGGTGCCGTGAGACCAATCCCACTTGCCTCCTCTTGATCTGAGGACAG TGATTGTTGCATTTCCCAGTTGAACATAGTAGCATTGTCTGTTTACATTAGGACTAGGAT ACCAGTTTATTTTAGAAAGGACCTGGTGGCCCACATGTAGAAGTGGCCTGGTATGTATTG TACATTTGTACTGCACGCTACTCGAGAGGATTGTTGCTCTGGGACTTCCTATGTCACATC ACTTGTAACAACAATGTAATTCCTAAGTTGAACCACATCGATTGTTTTTCAGTAATTTTC TACTTATCCA