Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012823_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:925235:928518:-1 gene:Zm00001d012823 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 22 description:Heat stress transcription factor A-1a
Sequence	ATGCAGGGCGGCGGGGTGGCCGCCGCCGCGGTCCCGGTGCACGCGGCCGTGGGGGGCGAC GGAGGAGGGGCGGCCGCCGCGCCGCCGCCGCCGTTCCTCATGAAGACGTACGAGATGGTG GACGACCCGGCCACGGACGGCGTCGTGTCCTGGGGCCCCGGGAACAACAGCTTCATCGTC TGGAACACGCCCGAGTTCGCCCGAGACCTCCTGCCCAAGTACTTCAAGCACAGCAACTTC TCCTCGTTCGTCAGGCAGCTCAACACCTACGTAAGTCACCGCATACCCGCTGACGCTACG CTCGCGCTGCTGTTCGTTATATCTGGCTGCGCACAAATGGGATGTCACAAATCCGGAAGA ATTTATGAGATGCCAATGCATCGAGACATGGAAACAGAGACTGTTTCTGTTGCACGTTTA CTGCCACTCACATTCAAACTATTTCTGGGGTTTAGAAAGGTTGATCCAGACAGATGGGAA TTTGCAAATGAGGGTTTTCTGAGAGGACAAAAACATCTGCTGAAGACTATCAACAGAAGG AAACCATCCTTGCAGGGTAACAGCCAACCACAGCAACCTCAGTTGCAGAACGCTCCTGTG CCTTCGTGTGTAGAGGTGGGTAAGTTTGGGTTGGAGGAAGAGATTGAACGGCTGAAAAGG GACAAGAATGTTCTTATGCAAGAGCTTGTAAGGCTGAGACAGCAACAGCAAACAACTGAC CATCAGCTCCAGACTTTGGGCAAGCGTCTTCAAGGGATGGAGTCACGGCAGCAACAGATG ATGTCTTTCCTGGCCAAAGCAATGCAAAGTCCTGGTTTCCTAGCACAGTTTGTACAGCGA AATGAGAACAGCAGGAGGAGAATAGTAGCTGCGAACAAGAAAAGGCGGCTGCCCAAGCAA GATGGTGGACTCGAGTCCGAAAGTTCTGCTGCTTCGTTAGACGGTCAAATTATCAAGTAT CAGCCTTCGATCAACGAAGCAGCCAAAGCAATGCTAAGGAAGATCCTAAACGTAGATTCT TCGCATAGGTTTGAATCTATGGGCAATTCAGATAATAGTAATAATAATAATATTCTGCTG GAGGATTATATGCCGGCCGCCCAAGCTTTTGAGAGCTCTTCGTCGACAAGAAATTCTGGG GTCACCCTTGCAGAGGTTCCAGCAAACTCAGGCTTGGCGTATGTCGGCACGAGCTCGGCT ATCTGTTCTCCTCCAGCGGCCCCTGAAATGCAGTGCCCAGTGGTGCTGGATAACAAGGCG TACAAGCAAGTGGCCAGCATGAGTGCTGTGCCTCCTGTTTCAAGTGACATGGGTATTATT CCGGAATTCTCAGATCTGGCAGACTTGGTCTCTGTGGATATTCTTGGAGGGGCCTTTGAG ATGATGCCTGGTCCTGAGTTCCCCCTGCCAGAAGAAGGTGATGATGGGACCACCATGTAC AACAACAACGACGAGGAGGCTCAGAGCCTTCCAGGCATCATCAACTCCATCTGGGAGCAG TTCCTGGTAGGCAGCCCTCTATCTACCGATAATGAGGAAGTTGATTCAGCAGGCGGACTA TATGCGCAGGAGGATGGATGGAGCAAAGTGGGGAACATCGCTAATCTTACAGAACAGATG GGACTTGTATCATCAACAAATCACCGGGACTCAGGGAATGGGCTGTACTAG

Peptide Sequence

PEP ID	Zm00001d012823_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:925235:928518:-1 gene:Zm00001d012823 transcript:Zm00001d012823_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 22 description:Heat stress transcription factor A-1a
Sequence	MQGGGVAAAAVPVHAAVGGDGGGAAAAPPPPFLMKTYEMVDDPATDGVVSWGPGNNSFIV WNTPEFARDLLPKYFKHSNFSSFVRQLNTYVSHRIPADATLALLFVISGCAQMGCHKSGR IYEMPMHRDMETETVSVARLLPLTFKLFLGFRKVDPDRWEFANEGFLRGQKHLLKTINRR KPSLQGNSQPQQPQLQNAPVPSCVEVGKFGLEEEIERLKRDKNVLMQELVRLRQQQQTTD HQLQTLGKRLQGMESRQQQMMSFLAKAMQSPGFLAQFVQRNENSRRRIVAANKKRRLPKQ DGGLESESSAASLDGQIIKYQPSINEAAKAMLRKILNVDSSHRFESMGNSDNSNNNNILL EDYMPAAQAFESSSSTRNSGVTLAEVPANSGLAYVGTSSAICSPPAAPEMQCPVVLDNKA YKQVASMSAVPPVSSDMGIIPEFSDLADLVSVDILGGAFEMMPGPEFPLPEEGDDGTTMY NNNDEEAQSLPGIINSIWEQFLVGSPLSTDNEEVDSAGGLYAQEDGWSKVGNIANLTEQM GLVSSTNHRDSGNGLY

Transcript Sequence

Transcript ID	Zm00001d012823_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:925235:928518:-1 gene:Zm00001d012823 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 22 description:Heat stress transcription factor A-1a
Sequence	ATGCAGGGCGGCGGGGTGGCCGCCGCCGCGGTCCCGGTGCACGCGGCCGTGGGGGGCGAC GGAGGAGGGGCGGCCGCCGCGCCGCCGCCGCCGTTCCTCATGAAGACGTACGAGATGGTG GACGACCCGGCCACGGACGGCGTCGTGTCCTGGGGCCCCGGGAACAACAGCTTCATCGTC TGGAACACGCCCGAGTTCGCCCGAGACCTCCTGCCCAAGTACTTCAAGCACAGCAACTTC TCCTCGTTCGTCAGGCAGCTCAACACCTACGTAAGTCACCGCATACCCGCTGACGCTACG CTCGCGCTGCTGTTCGTTATATCTGGCTGCGCACAAATGGGATGTCACAAATCCGGAAGA ATTTATGAGATGCCAATGCATCGAGACATGGAAACAGAGACTGTTTCTGTTGCACGTTTA CTGCCACTCACATTCAAACTATTTCTGGGGTTTAGAAAGGTTGATCCAGACAGATGGGAA TTTGCAAATGAGGGTTTTCTGAGAGGACAAAAACATCTGCTGAAGACTATCAACAGAAGG AAACCATCCTTGCAGGGTAACAGCCAACCACAGCAACCTCAGTTGCAGAACGCTCCTGTG CCTTCGTGTGTAGAGGTGGGTAAGTTTGGGTTGGAGGAAGAGATTGAACGGCTGAAAAGG GACAAGAATGTTCTTATGCAAGAGCTTGTAAGGCTGAGACAGCAACAGCAAACAACTGAC CATCAGCTCCAGACTTTGGGCAAGCGTCTTCAAGGGATGGAGTCACGGCAGCAACAGATG ATGTCTTTCCTGGCCAAAGCAATGCAAAGTCCTGGTTTCCTAGCACAGTTTGTACAGCGA AATGAGAACAGCAGGAGGAGAATAGTAGCTGCGAACAAGAAAAGGCGGCTGCCCAAGCAA GATGGTGGACTCGAGTCCGAAAGTTCTGCTGCTTCGTTAGACGGTCAAATTATCAAGTAT CAGCCTTCGATCAACGAAGCAGCCAAAGCAATGCTAAGGAAGATCCTAAACGTAGATTCT TCGCATAGGTTTGAATCTATGGGCAATTCAGATAATAGTAATAATAATAATATTCTGCTG GAGGATTATATGCCGGCCGCCCAAGCTTTTGAGAGCTCTTCGTCGACAAGAAATTCTGGG GTCACCCTTGCAGAGGTTCCAGCAAACTCAGGCTTGGCGTATGTCGGCACGAGCTCGGCT ATCTGTTCTCCTCCAGCGGCCCCTGAAATGCAGTGCCCAGTGGTGCTGGATAACAAGGCG TACAAGCAAGTGGCCAGCATGAGTGCTGTGCCTCCTGTTTCAAGTGACATGGGTATTATT CCGGAATTCTCAGATCTGGCAGACTTGGTCTCTGTGGATATTCTTGGAGGGGCCTTTGAG ATGATGCCTGGTCCTGAGTTCCCCCTGCCAGAAGAAGGTGATGATGGGACCACCATGTAC AACAACAACGACGAGGAGGCTCAGAGCCTTCCAGGCATCATCAACTCCATCTGGGAGCAG TTCCTGGTAGGCAGCCCTCTATCTACCGATAATGAGGAAGTTGATTCAGCAGGCGGACTA TATGCGCAGGAGGATGGATGGAGCAAAGTGGGGAACATCGCTAATCTTACAGAACAGATG GGACTTGTATCATCAACAAATCACCGGGACTCAGGGAATGGGCTGTACTAGTATCTTAAT TAATACAGTAGACTGAGGATTCTGGTAATAAGTGTTGCATGCTCTTTTCTTATTTAATTA TTTTCCCCCTTTTCGCCAACTCAATATGGGAGGTGGGGGTGAGGAGATTCAAAGGCATGT TTGGCTCGTTACCTAAGTTGACACACTTTGCCAAACTTACTTTTATGACTAAGGTTAGTT ATTTAATTTGGACGACTAACTTTAGACAAAGTGTGACACATTTAGCCACAAACCAAACAG ACCCTCTGTCTTTCAGCCATGTATGATCTATATGACTACTTGTTCTCGACTTTA