Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012771_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:180533264:180534913:1 gene:Zm00001d012771 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA/rRNA methyltransferase (SpoU) family protein
Sequence	ATGCTCCACTCCAGCTTGTCCAAGTGCCACCCTCTCCCGCTCCTCGCAACCGCGTCCTCG CCCCGCCGCACCCTCGTCGCCGTCCTCCTCCGCGCCGGCTACCTTTCGAAGCATCCAGCC ACTTCAACCGCGCCTCGTCCGACCACAACCGCCTGTGCGAGCGCCAGGGTCGACACTTCC CCGGGCGAATCCCGCTTCGGGCTGGAAGGCAGGGTTTCGTTCTCCACCGCGCCGGATGGG TCCGCATTGGCTGGCGGCGGGAGGGCGCTTCCCTGGCTTGCAGCTGAGACTGGCAACAGC GGCGCGCCCGTTGCTAGGACTAGCGCCGGCCGATCCTCCTCGTGGGAGAGCTCCGCAGAG AAGTTCTTCTCGAGAGACGACCAATACACGCGAAGAGAAGTGTCGGGAGTCAGGATGTCG GACAAGGTAGCTATTAAGGATGACGATGACGAGAATGAGGGGAATGGCAATCCTGAACGG GGAAGGATTAAGGGCAGGTACCAACGAAGAGAGGTGTCGGGAAACAGGATGCCAAACAAG GTGGCGATTAGGGAACAAGAGGATGAGGATGAGCCAATTGACAATCCCAAATGGGGAAGG ATTAAAGACAGGTACCAGCGAATTGGGGGGAGGGATGGAGGGTCCCGTGATGAGAGGTTT AGGAGGGAGAGATTTGACAAGCCGGATGTGAGGCAGTGGAACAAGCAGGAGAATTGGGGA AGGAACACAGGGAAGGAAGCAGGGGAATCATCGGTGCCAAAGATGGTGGGGCAAGGAGTC TATGGTGTTGGGCCTGTCCTTGCAGCACTCATGGCTCGGAGGAGGGAGTTTTATGCGCTG TATATACAGGAAAGTATGGATTTGAGCGGGAACAACAAGAAAAGGAAAGATAAGAAGGCA GTTGAGAAAGTGCTGCGGATGGCAGAGGAGATTGGGCTGAATGTTATTGAGACTCCAAAG CATGATCTTAACATGGTGGTGGATAACCGACCACACCAAGGTGTGGTGCTCGATGCATCA CCCTTGGAAATGGTCAATATAAAGGAGTTAGATCCAGTCAGGGTGGAAGGTGGAAAGGCA CCTGTGTGGATAGCCTTGGATGAGATTATGGATCCTCAGAATTTAGGAGCCATTATTAGG TCCGCCTACTACTTTGGTGCTCAGGGTGTTGTGTTGTGTGCTAAGAACTCTGCTCCATTA AGTGGAGTAGTGAGCAAAGCTAGTGCAGGTTCACTCGAGTTGATTGAGCTACTCTCCTGC AGAAACATGATGCAGTTCTTGTCTTCGTCAGCTGAAAATGGTTGGCGAGTCCTTGGTGGT ACCATTGCTAACAAAGCTGTACCTCTCTCTCAAGTGGAATTAGGGGTGCCAACTATTCTT GTGATGGGTAGTGAAGGCACTGGATTGAGACCCCTGGTTGAGCGATCCTGCACACATCTT GTCAGAATACCTGGAAATGTTGATGTATCTGTTGAAGGAGCAGATGCAGATGCAGGGGAA GAAGGTGACAGTTCTAGTAATCGAGATTTGAGATCATTCCTTGCGGTCGAGAGTTTGAAT GTTAGTGTTGCAGCAGGAGTGTTGCTTTATCATCTGGCTGCAAAAGATGCCTGCCCCATA AGCGATAAGCCTAGTGTTACTCTAATGTAA

Peptide Sequence

PEP ID	Zm00001d012771_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:180533264:180534913:1 gene:Zm00001d012771 transcript:Zm00001d012771_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA/rRNA methyltransferase (SpoU) family protein
Sequence	MLHSSLSKCHPLPLLATASSPRRTLVAVLLRAGYLSKHPATSTAPRPTTTACASARVDTS PGESRFGLEGRVSFSTAPDGSALAGGGRALPWLAAETGNSGAPVARTSAGRSSSWESSAE KFFSRDDQYTRREVSGVRMSDKVAIKDDDDENEGNGNPERGRIKGRYQRREVSGNRMPNK VAIREQEDEDEPIDNPKWGRIKDRYQRIGGRDGGSRDERFRRERFDKPDVRQWNKQENWG RNTGKEAGESSVPKMVGQGVYGVGPVLAALMARRREFYALYIQESMDLSGNNKKRKDKKA VEKVLRMAEEIGLNVIETPKHDLNMVVDNRPHQGVVLDASPLEMVNIKELDPVRVEGGKA PVWIALDEIMDPQNLGAIIRSAYYFGAQGVVLCAKNSAPLSGVVSKASAGSLELIELLSC RNMMQFLSSSAENGWRVLGGTIANKAVPLSQVELGVPTILVMGSEGTGLRPLVERSCTHL VRIPGNVDVSVEGADADAGEEGDSSSNRDLRSFLAVESLNVSVAAGVLLYHLAAKDACPI SDKPSVTLM

Transcript Sequence

Transcript ID	Zm00001d012771_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:180533264:180534913:1 gene:Zm00001d012771 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA/rRNA methyltransferase (SpoU) family protein
Sequence	ATGCTCCACTCCAGCTTGTCCAAGTGCCACCCTCTCCCGCTCCTCGCAACCGCGTCCTCG CCCCGCCGCACCCTCGTCGCCGTCCTCCTCCGCGCCGGCTACCTTTCGAAGCATCCAGCC ACTTCAACCGCGCCTCGTCCGACCACAACCGCCTGTGCGAGCGCCAGGGTCGACACTTCC CCGGGCGAATCCCGCTTCGGGCTGGAAGGCAGGGTTTCGTTCTCCACCGCGCCGGATGGG TCCGCATTGGCTGGCGGCGGGAGGGCGCTTCCCTGGCTTGCAGCTGAGACTGGCAACAGC GGCGCGCCCGTTGCTAGGACTAGCGCCGGCCGATCCTCCTCGTGGGAGAGCTCCGCAGAG AAGTTCTTCTCGAGAGACGACCAATACACGCGAAGAGAAGTGTCGGGAGTCAGGATGTCG GACAAGGTAGCTATTAAGGATGACGATGACGAGAATGAGGGGAATGGCAATCCTGAACGG GGAAGGATTAAGGGCAGGTACCAACGAAGAGAGGTGTCGGGAAACAGGATGCCAAACAAG GTGGCGATTAGGGAACAAGAGGATGAGGATGAGCCAATTGACAATCCCAAATGGGGAAGG ATTAAAGACAGGTACCAGCGAATTGGGGGGAGGGATGGAGGGTCCCGTGATGAGAGGTTT AGGAGGGAGAGATTTGACAAGCCGGATGTGAGGCAGTGGAACAAGCAGGAGAATTGGGGA AGGAACACAGGGAAGGAAGCAGGGGAATCATCGGTGCCAAAGATGGTGGGGCAAGGAGTC TATGGTGTTGGGCCTGTCCTTGCAGCACTCATGGCTCGGAGGAGGGAGTTTTATGCGCTG TATATACAGGAAAGTATGGATTTGAGCGGGAACAACAAGAAAAGGAAAGATAAGAAGGCA GTTGAGAAAGTGCTGCGGATGGCAGAGGAGATTGGGCTGAATGTTATTGAGACTCCAAAG CATGATCTTAACATGGTGGTGGATAACCGACCACACCAAGGTGTGGTGCTCGATGCATCA CCCTTGGAAATGGTCAATATAAAGGAGTTAGATCCAGTCAGGGTGGAAGGTGGAAAGGCA CCTGTGTGGATAGCCTTGGATGAGATTATGGATCCTCAGAATTTAGGAGCCATTATTAGG TCCGCCTACTACTTTGGTGCTCAGGGTGTTGTGTTGTGTGCTAAGAACTCTGCTCCATTA AGTGGAGTAGTGAGCAAAGCTAGTGCAGGTTCACTCGAGTTGATTGAGCTACTCTCCTGC AGAAACATGATGCAGTTCTTGTCTTCGTCAGCTGAAAATGGTTGGCGAGTCCTTGGTGGT ACCATTGCTAACAAAGCTGTACCTCTCTCTCAAGTGGAATTAGGGGTGCCAACTATTCTT GTGATGGGTAGTGAAGGCACTGGATTGAGACCCCTGGTTGAGCGATCCTGCACACATCTT GTCAGAATACCTGGAAATGTTGATGTATCTGTTGAAGGAGCAGATGCAGATGCAGGGGAA GAAGGTGACAGTTCTAGTAATCGAGATTTGAGATCATTCCTTGCGGTCGAGAGTTTGAAT GTTAGTGTTGCAGCAGGAGTGTTGCTTTATCATCTGGCTGCAAAAGATGCCTGCCCCATA AGCGATAAGCCTAGTGTTACTCTAATGTAA