Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012750_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:8:179683029:179693484:-1 gene:Zm00001d012750 gene_biotype:protein_coding transcript_biotype:protein_coding description:MACPF domain-containing protein CAD1
Sequence	ATGAGCCTTGCGGGCTCCGCGCTGGAGGCAGCGCTACTGGCGGTGGGGCGCGGCCTCGAC GCAGCTGGAGACCACCGGCTGCTTTACTGCAAGGGAGACGGAAGGCTCGTCGCGCTCGAG GACCGTGCGCGGGACCTCCCGCTCCCCGACGGCGGCGTCCTCCCGAGCGTGCCCCACGAC GTCGAGGTCGAGCAGTGCCGCAGAGACCTCGAGCGCATCCGCCCCTTCCCGTCCGGGTCC GGCCCAAGCTCCGCCGCAGCGGACGGTCCCTTTGTCTGCAGCTTCGATAAGATGGCTGAG TATTTCAACAGGAAGTCATGTTTGTCCGAGACAGTACCGCTGGGTTCCTTCAACTCTCTC TTCAGCTTCACCGGTTCTTGGAAGAATGATGCGGCGACCACGAAGGCCCTTGCGATTGAT GGCTATTCTCTGCCTCTGTTTCGAGTTAAAATTAGGAATTCTGAACTGACGCTGCTTGAG AGCGTTAAGCGAAGGATCCCAAATGTTTGGGATCCATCAGCATTGGCAAGCTTTATTGAG AACTATGGTACCCATATTATTATCTCTGTTACGGTTGGTGGTAAGGATGAGGTATACATT AAGCAGCATTCATTGTCCCAATTGTCAGAGCTGGAGTTCAAAAATTATGCGAGGGAAATT GGGAGGGAAAGATTTGCAGATGTGGAAAATAAGTCAAATGCATCTTCTATCAATTACAGT GAGAAGGATATGACAGTAATATTCAGAAGGAGGGGTGGTTGCGACCTTGTTCAAAGTTTT AGTGATTGGAGAGGAACTGTTGCCTCAGCACCAGATGTCATAGGCATCACCTTTCTATCA ATTGTCTCTCTTGTTGACGATATACCAGGAAAGAAGCACCTTGCTCGTGCAGTTGAGCTA TACTTGACCTACAAACCTCCAATTGAAGAATTACAGTACTTCTTAGATTTTCGAGTCCCA CTAGTTTGGGCTCCAGCTCCACCAGGTATTGCTGGTCACCATAGGAAAGAACCAGTCTGC CCATCGCTTCAGTTTAGCTTAATGGGCCCAAAGCTCTTCATTAGCACAGAACAGATCTCT GTTGGCCGTCGACCAGTTGTTGGCCTCAAACTGATTTTGGAAGGAGCCAAACAGAATCGT CTGGCTATTCATTTGCAGCACCTTGGCTCATTACCAAAAATATTCCTACCTCATTGGGAC TCCTATATTACTATTGGACCTCCAAAATGGCAAGGTCCTGAAGAACAGGACAGCCGATGG TTTGAGCCAATCAAATGGAAGAACTTTGCTCATGTTAGCACAGCACCCATAGAGTACACT GAAACAAATATTACGGACCTATCTGGTGTTTATATTGTTACAGGAGCACAGTTGGGAGTG TGGGATTTTGGTGCAAAGAGTGTTCTCCACCTTAAACTTTTGTTCTCCAGGGTTCCTGGG TGCACAATTAGAAGATCAGTGTGGGACCACAGCCCATCAAGTTCCTCGGTACATAGAACA GATGAATCTTCGTCATCCTCAAGTGATAATGCTAAACTTCTGAAGATCGTTGACCTGACA GAAACATTCAAGGGCCCACAAGATGCGCCTGGCCATTGGCTGATCACAGGTGCTAAGTTG GGTGTCGAGAAAGGCAGGATTGTTGTGCGTGCAAAGTACTCCTTATTGAATTATTAA

Peptide Sequence

PEP ID	Zm00001d012750_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:8:179683029:179693484:-1 gene:Zm00001d012750 transcript:Zm00001d012750_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:MACPF domain-containing protein CAD1
Sequence	MSLAGSALEAALLAVGRGLDAAGDHRLLYCKGDGRLVALEDRARDLPLPDGGVLPSVPHD VEVEQCRRDLERIRPFPSGSGPSSAAADGPFVCSFDKMAEYFNRKSCLSETVPLGSFNSL FSFTGSWKNDAATTKALAIDGYSLPLFRVKIRNSELTLLESVKRRIPNVWDPSALASFIE NYGTHIIISVTVGGKDEVYIKQHSLSQLSELEFKNYAREIGRERFADVENKSNASSINYS EKDMTVIFRRRGGCDLVQSFSDWRGTVASAPDVIGITFLSIVSLVDDIPGKKHLARAVEL YLTYKPPIEELQYFLDFRVPLVWAPAPPGIAGHHRKEPVCPSLQFSLMGPKLFISTEQIS VGRRPVVGLKLILEGAKQNRLAIHLQHLGSLPKIFLPHWDSYITIGPPKWQGPEEQDSRW FEPIKWKNFAHVSTAPIEYTETNITDLSGVYIVTGAQLGVWDFGAKSVLHLKLLFSRVPG CTIRRSVWDHSPSSSSVHRTDESSSSSSDNAKLLKIVDLTETFKGPQDAPGHWLITGAKL GVEKGRIVVRAKYSLLNY

Transcript Sequence

Transcript ID	Zm00001d012750_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:179683029:179693484:-1 gene:Zm00001d012750 gene_biotype:protein_coding transcript_biotype:protein_coding description:MACPF domain-containing protein CAD1
Sequence	AAATGAAGAAAAAGAAAAGCCAGTCAAACCCAACCACCTCGGCATCGGGGTCTCCTTCCC CTCCTCCGGTTGTCCGGTCCCCCAGAAACCGTGTCCTTCCGTCGTGACAGCTCCCGACCT TCTGGCGGTCTTCCCCTCTCGTAGTCGGCGCGAATCCCGAGGTGGAGGAGGAAGAGGTAG AGGGGGCGGGCCCCATCATCCATGAGCCTTGCGGGCTCCGCGCTGGAGGCAGCGCTACTG GCGGTGGGGCGCGGCCTCGACGCAGCTGGAGACCACCGGCTGCTTTACTGCAAGGGAGAC GGAAGGCTCGTCGCGCTCGAGGACCGTGCGCGGGACCTCCCGCTCCCCGACGGCGGCGTC CTCCCGAGCGTGCCCCACGACGTCGAGGTCGAGCAGTGCCGCAGAGACCTCGAGCGCATC CGCCCCTTCCCGTCCGGGTCCGGCCCAAGCTCCGCCGCAGCGGACGGTCCCTTTGTCTGC AGCTTCGATAAGATGGCTGAGTATTTCAACAGGAAGTCATGTTTGTCCGAGACAGTACCG CTGGGTTCCTTCAACTCTCTCTTCAGCTTCACCGGTTCTTGGAAGAATGATGCGGCGACC ACGAAGGCCCTTGCGATTGATGGCTATTCTCTGCCTCTGTTTCGAGTTAAAATTAGGAAT TCTGAACTGACGCTGCTTGAGAGCGTTAAGCGAAGGATCCCAAATGTTTGGGATCCATCA GCATTGGCAAGCTTTATTGAGAACTATGGTACCCATATTATTATCTCTGTTACGGTTGGT GGTAAGGATGAGGTATACATTAAGCAGCATTCATTGTCCCAATTGTCAGAGCTGGAGTTC AAAAATTATGCGAGGGAAATTGGGAGGGAAAGATTTGCAGATGTGGAAAATAAGTCAAAT GCATCTTCTATCAATTACAGTGAGAAGGATATGACAGTAATATTCAGAAGGAGGGGTGGT TGCGACCTTGTTCAAAGTTTTAGTGATTGGAGAGGAACTGTTGCCTCAGCACCAGATGTC ATAGGCATCACCTTTCTATCAATTGTCTCTCTTGTTGACGATATACCAGGAAAGAAGCAC CTTGCTCGTGCAGTTGAGCTATACTTGACCTACAAACCTCCAATTGAAGAATTACAGTAC TTCTTAGATTTTCGAGTCCCACTAGTTTGGGCTCCAGCTCCACCAGGTATTGCTGGTCAC CATAGGAAAGAACCAGTCTGCCCATCGCTTCAGTTTAGCTTAATGGGCCCAAAGCTCTTC ATTAGCACAGAACAGATCTCTGTTGGCCGTCGACCAGTTGTTGGCCTCAAACTGATTTTG GAAGGAGCCAAACAGAATCGTCTGGCTATTCATTTGCAGCACCTTGGCTCATTACCAAAA ATATTCCTACCTCATTGGGACTCCTATATTACTATTGGACCTCCAAAATGGCAAGGTCCT GAAGAACAGGACAGCCGATGGTTTGAGCCAATCAAATGGAAGAACTTTGCTCATGTTAGC ACAGCACCCATAGAGTACACTGAAACAAATATTACGGACCTATCTGGTGTTTATATTGTT ACAGGAGCACAGTTGGGAGTGTGGGATTTTGGTGCAAAGAGTGTTCTCCACCTTAAACTT TTGTTCTCCAGGGTTCCTGGGTGCACAATTAGAAGATCAGTGTGGGACCACAGCCCATCA AGTTCCTCGGTACATAGAACAGATGAATCTTCGTCATCCTCAAGTGATAATGCTAAACTT CTGAAGATCGTTGACCTGACAGAAACATTCAAGGGCCCACAAGATGCGCCTGGCCATTGG CTGATCACAGGTGCTAAGTTGGGTGTCGAGAAAGGCAGGATTGTTGTGCGTGCAAAGTAC TCCTTATTGAATTATTAACCAAATGTTTAAATCATTCAATCACTCTGATATTGAGCACTG TGTTTTAAGGTAGCATTTGTTCTTTTGTTTTTCATGTATGGCTTTTGTTCCCCCTTGTAA CATGATGTGGATCATGTTTCTTGTTGATGATGCCGTGAGTGAAGCACTACATTCGTTCTC GAAT