Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012734_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:8:179510876:179513656:1 gene:Zm00001d012734 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VOZ-transcription factor 5 description:Vascular plant one zinc finger protein

Sequence

ATGAATAGTTGTGGGCAGAGTGCCGGGGCTGTTTTCCTGCACATGCCAGATTTGCTCACA
ACAATGACTTCAGCACCTTCTGCATTCCTGAAGCCAAAATGCGCTCTCTGGGACTGCCCC
AGGCCTGCTATTGGATCAGAAAGATGGCATAATTATTGCAGCATGTATCATGCTGATTTG
GCTGTGCAGGAAGAGGGCCCTCCAGGCACAATGCCTGTGATCCGTCCAAGAGGCATTGAT
CTGAAAGATGGCCCCCTGTTTGCTGCTCTTAGTGCAAAAGTCCAAGGAAAAAACGTTGGG
GTCCCTATCTGTGAAGGAGCTGCCACTGCAAAGTCTCCATGGAATGCACCTGAACTTTTC
GATCTTTACATATTTGAAGGTGAATCTATCAGAGAATGGTTGTTTTTTGACAAACCAAGG
AGGGCATTTGATAGTGGAAATCGGAAGCAGCGGTCCTTGCCAGACTACAACGGCCGTGGT
TGGCATGAATCTAGGAAGCAGGTGATGAAGGACTTTGGGGGTCTGAAGAGGTCCTATTAC
ATGGATCCACAACCATCCAACGGCTATGAATGGCACCTATATGAATATGAGATCAATGAC
TGTGATGCTTTTGCCTTATATCGGCTTGAATTCAAGTCTTCAGATGCAAAGAAAATTGCA
AAATCCAAATTAGGTTGTAATCCACTGAATGAAATTCAGCAGCAAATGGATAGACTCAGT
GCAGACAGTCCTGTCGACACCAAACGGACGGCCCGGAGCCGGACAGAGCCTAACCCGATA
GATGTCAATACTAACATCTATTCAGTTCCAAACACCACAGTTCAAACTGATGTTCCAAAT
GCTTATCAGCCAGGGTCACAAGTGGACCAGATGACATATTTGAACGGTAGTGTCGTTTAT
GGGCCTCATCTGCCGTACGGTTACTCGACTGAAAGAAGTGACTTCTATTGGAACTCAAAT
GATGGGACATGA

Peptide Sequence

PEP ID

Zm00001d012734_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:8:179510876:179513656:1 gene:Zm00001d012734 transcript:Zm00001d012734_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VOZ-transcription factor 5 description:Vascular plant one zinc finger protein

Sequence

MNSCGQSAGAVFLHMPDLLTTMTSAPSAFLKPKCALWDCPRPAIGSERWHNYCSMYHADL
AVQEEGPPGTMPVIRPRGIDLKDGPLFAALSAKVQGKNVGVPICEGAATAKSPWNAPELF
DLYIFEGESIREWLFFDKPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKRSYY
MDPQPSNGYEWHLYEYEINDCDAFALYRLEFKSSDAKKIAKSKLGCNPLNEIQQQMDRLS
ADSPVDTKRTARSRTEPNPIDVNTNIYSVPNTTVQTDVPNAYQPGSQVDQMTYLNGSVVY
GPHLPYGYSTERSDFYWNSNDGT

Transcript Sequence

Transcript ID

Zm00001d012734_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:179510876:179513656:1 gene:Zm00001d012734 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VOZ-transcription factor 5 description:Vascular plant one zinc finger protein

Sequence

CTTGCGAAACAAAGGACGGCGCGCCAGAGGAGGGGAAAGGAAAACAACCACCACGACCCC
GTCCATTCCGTTCCACTTCCACCCGAGCTCAGCGATCGCGGCGGCGGATGCGGATGCGGA
TGGGGAAGGGGCCGTCGTCGCGGGCGGGGTCGCGGCACCGGCAGTTCCGCGCCCGAGCCA
TGACCCGCGTCGACGACCTCCAGGAGGTCTTCTCGGGCCTGCAGTCCGCGCGCAAGGACT
CACGCTCCGCGGACGCCGCCGTCCTCGAGGCGCAGCTCCAGCAGATGCTGCGGGAGTGGC
GCTCCGAGCTCAGCGATCCCTCCCCCGCCTCCTCCCTGCAGGGCAACGCCAGGGAACTGT
CGGATCCGCCTTCCGATACTCTTCGTCTGCTGCAGTTGGTGGTGGCCGAGGAGGAGGATG
ACGCCACGAGCAAGATGGTCGAGCAGCAGCAGCAGCAGCCCCCACCTCCGCTCCCAGCTA
ACCGGAGCCAGGGGCACGCGCATGTTGTGTGCCAGGGCATGAAGCCGGAGCCGCGCGAGG
AAGCAGTTGACGTCGCTGTGGACCAGCCGCAGCTGCTGAGTCAGGGGGTTCTGCCTAATG
GTGCTGCTACCGCGTCTGCGATGTTCCATGATCAGGTTTTCATTACTCCTTGTTTCCTGT
ATGCAAGTTTGAACATTTTTTTTTCTTATTTTGGTGGAATGACTGACAGGCAGAGTTACG
ACCTTTATGAAGAAGATTTATGGTCCGCAGACTAGGATTTATCGCCGACTGTGATCATGT
GTTAGTCCTAGAGTCTTCAAATGATCCAGCTAGATTTATCTAGCCTGCACATATGTTCAT
GTGATCTGCCTCATTTTTAGTTTGGAATCTTGGATTGGTGTGATCTACAAGTAACCTAAC
CCTCATTAGAACCTTTCTCGGTAGTTTCTGCATCTTTTGGGACAAATTTACTGGGTAGAG
CCTCTGCTCTCTGTTTTAGAGTATATATTTAGTAGTCTAGATATTATGTCTAGTAGTCTT
TGGTCTCATAAGGACTTGCAATTTGGGGAGAAGAGAGTAATTCTTTGGTCCTAGATATTG
CAACATTTTAGATGCTATATGTACTGATTTATATGTAATTATGGCATGCATGTAATTGAC
ATGTCAGTGACTTTAGCTTTGTGCCAATTTCAAAAAAGTTGAAGTCCAATGGAGTTGTGC
CAATTTTCTTGCAGCTGTACTATGTGAACCAGGAGCTCACGGTCGAGGATTTTCTTTATG
ATGATGATTACAAGATAGATCTTTCTGGGTCTAATCTGGATGTCATTAATAACCTAGAAG
GGATTGTTCAGCTGGAATATCCAGATCACAATTTGCCGCAAGGGTTAGCCCCTAATGCAT
ACCTTGACATGAATAGTTGTGGGCAGAGTGCCGGGGCTGTTTTCCTGCACATGCCAGATT
TGCTCACAACAATGACTTCAGCACCTTCTGCATTCCTGAAGCCAAAATGCGCTCTCTGGG
ACTGCCCCAGGCCTGCTATTGGATCAGAAAGATGGCATAATTATTGCAGCATGTATCATG
CTGATTTGGCTGTGCAGGAAGAGGGCCCTCCAGGCACAATGCCTGTGATCCGTCCAAGAG
GCATTGATCTGAAAGATGGCCCCCTGTTTGCTGCTCTTAGTGCAAAAGTCCAAGGAAAAA
ACGTTGGGGTCCCTATCTGTGAAGGAGCTGCCACTGCAAAGTCTCCATGGAATGCACCTG
AACTTTTCGATCTTTACATATTTGAAGGTGAATCTATCAGAGAATGGTTGTTTTTTGACA
AACCAAGGAGGGCATTTGATAGTGGAAATCGGAAGCAGCGGTCCTTGCCAGACTACAACG
GCCGTGGTTGGCATGAATCTAGGAAGCAGGTGATGAAGGACTTTGGGGGTCTGAAGAGGT
CCTATTACATGGATCCACAACCATCCAACGGCTATGAATGGCACCTATATGAATATGAGA
TCAATGACTGTGATGCTTTTGCCTTATATCGGCTTGAATTCAAGTCTTCAGATGCAAAGA
AAATTGCAAAATCCAAATTAGGTTGTAATCCACTGAATGAAATTCAGCAGCAAATGGATA
GACTCAGTGCAGACAGTCCTGTCGACACCAAACGGACGGCCCGGAGCCGGACAGAGCCTA
ACCCGATAGATGTCAATACTAACATCTATTCAGTTCCAAACACCACAGTTCAAACTGATG
TTCCAAATGCTTATCAGCCAGGGTCACAAGTGGACCAGATGACATATTTGAACGGTAGTG
TCGTTTATGGGCCTCATCTGCCGTACGGTTACTCGACTGAAAGAAGTGACTTCTATTGGA
ACTCAAATGATGGGACATGAGAAGATATAAACACATGTTCGATTTATGGCATATTTGGCC
TTCAAGTTCTAACAATTCCCGTTATGATTATTGGGTCAAATCTATTAGCATGACCCCCAT
CTTCTTGTAATTGTAGTTGGCCCAATCTACAGGAAACATCTCTGAAACAAGGGATGCCAA
TAGGCAATACTGCAGTTCTATTTTCTGTGGCAACTTTGTCGTTGTAATATAGCCATATCA
TGATAATAGC