Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012732_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:179488826:179492378:1 gene:Zm00001d012732 gene_biotype:protein_coding transcript_biotype:protein_coding description:Optic atrophy 3 protein (OPA3)
Sequence

ATGGTGCTCCCGCTGGTGAAGCTCGGCTCGCTCGCGTTCCGGACGCTGAGCAAGCCCATC
GCGGCCCGCCTCAAGTACAACGCCGGCATCCACCCCAAGTTCCGCGGTCTCATCATCGGC
ATCGCGCAGGCAAACCATCGTTTCACGACAAATATGCAGAGGCGACTTTACGGACGTGCG
ACTGACATTCACATTCGGCCCCTGAATGAGGAGAAAGCTATTCAAGCTGCCGCAGATCTT
CTCGGTGAACTATTTGTTTTCTCGGTCGCTGGTGCTGCGATTATCTATGAGGTGCAAAGA
AGTGCTAGGTCAGAAGCCAGAAAAGAGGAGGCCCGTCGTCTGGAAATTGAGGGGATAAAG
AAAAGGGAGGAGCAACTAGCGCTGGAAGTACAGATAATGAAACACAAGATTAGCGAGATG
GAGCGGCAGTACTCGAAGTGGACCCTTCCCGGGCTTCGCGGCTTCGGCACTGCCCAGGCG
GCGGCACAGCCTGCTGGTACTCAGCACCCAACAGCTGCGTGA

Peptide Sequence

PEP ID

Zm00001d012732_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:179488826:179492378:1 gene:Zm00001d012732 transcript:Zm00001d012732_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Optic atrophy 3 protein (OPA3)
Sequence

MVLPLVKLGSLAFRTLSKPIAARLKYNAGIHPKFRGLIIGIAQANHRFTTNMQRRLYGRA
TDIHIRPLNEEKAIQAAADLLGELFVFSVAGAAIIYEVQRSARSEARKEEARRLEIEGIK
KREEQLALEVQIMKHKISEMERQYSKWTLPGLRGFGTAQAAAQPAGTQHPTAA

Transcript Sequence

Transcript ID

Zm00001d012732_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:179488826:179492378:1 gene:Zm00001d012732 gene_biotype:protein_coding transcript_biotype:protein_coding description:Optic atrophy 3 protein (OPA3)
Sequence

GCCGCCGCGCACCTACGCCCACGGAACACGCCGTCATATGAGTGGAGAGAGAACCCCGCG
CCTCCTCCTCCGTGAGCTCCGTACAAGGAGGCTAGAGCGGCGGCAGCATCGGAGGGGTCG
GTGAGGAGGGCGATGGTGCTCCCGCTGGTGAAGCTCGGCTCGCTCGCGTTCCGGACGCTG
AGCAAGCCCATCGCGGCCCGCCTCAAGTACAACGCCGGCATCCACCCCAAGTTCCGCGGT
CTCATCATCGGCATCGCGCAGGCAAACCATCGTTTCACGACAAATATGCAGAGGCGACTT
TACGGACGTGCGACTGACATTCACATTCGGCCCCTGAATGAGGAGAAAGCTATTCAAGCT
GCCGCAGATCTTCTCGGTGAACTATTTGTTTTCTCGGTCGCTGGTGCTGCGATTATCTAT
GAGGTGCAAAGAAGTGCTAGGTCAGAAGCCAGAAAAGAGGAGGCCCGTCGTCTGGAAATT
GAGGGGATAAAGAAAAGGGAGGAGCAACTAGCGCTGGAAGTACAGATAATGAAACACAAG
ATTAGCGAGATGGAGCGGCAGTACTCGAAGTGGACCCTTCCCGGGCTTCGCGGCTTCGGC
ACTGCCCAGGCGGCGGCACAGCCTGCTGGTACTCAGCACCCAACAGCTGCGTGATTGCTC
TACTTCTGCAACTGTCGACAGCTCGCGATCTGGATGGCCGACTGCAGACTGCCTCTGTTT
AGCTTGCATTTTACTCCGTTACATAATTGATTCGACTTCAGTAGCTGGCGAAAGGCTGAG
GGTTACGTTGTGGTACAACTGAATCGAAGTTGTTATCGCCTTATAGGTTGATCGGATCGG
CGACATGACATTCAGACCATGTTTGTCGTAGCTTAACTTATTTCACAGCTTCTTCATAGA
TTTAAGCAGGAGATAGATTTAAATAGAAGTACCAAACAGTAGCTTCTGCAACAGTCTCCC
CTTTTAGTCGTAGCTTAACTTATTTCACAGATTTGTCGTAGCTTAACTTATTTTACAGCT
TCTTCGTTGCTTTTTAG