Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012728_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:179391080:179396140:1 gene:Zm00001d012728 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DUF1421 domain family protein
Sequence	ATGTCCGTCCCCGGCGCCCCCGCGGGCGGCGGTTCCCGCAGCTTCGACTTCGGCGCCGAC GACGTGCTCTGCTCCTACGATGACTTCGCCGCCTCGTCCGAGCCCAAGCGCCCCGATCCG GCCGACAGTGCGCCCGATTTTCATGATAGCAGATTGGGGAGGCCATTTGTGAAACCTTAT GAACAAGAAAGTTATGGGAAAGAGGATGTGCTTTCTGCTGTTGAGAAATGCATGAAAAAG TATGCTGATAATTTGCTACGATCTCTTGAGGGAATCACTAGTCGGCTTTCGCAACTGGAG ATTTATTGCTATAAGCTTGAGAGATCCATAGGTGAACTTCGAAGTGATGTGCTTCGTGAT GAGACTGACCATAGGTTGAAGTCTCTTGAGAAACATCTAAATGAAGTACACAGGTCTATC CAAATTCTTAGGGACAAACAGGAGTTAGCTGAAGCTCAGAAGGAATTGGCCAAATTTCAA CTTACACAAGATACATCTAAAAAGAAGGAAGATGTACCAACATCTATTCCTGAGCAAAAG AAGCTTGAAGAAAACCCTGACACATCAAACCAGCAATTGGCTCTTGTTTTGCCTCATCAG GTGAACCTGCCATCACTTGCCCCTAGAGCTTCTGAATCAGTCCAACAGTACAAGAATCAA CCTGTGCAACCATCAGACCCAACCCCTCCCGTGCCACAGCAGGACCGCTATGTTCTTAGC CAAGCCATCGTCTACTACCCACAGCGCCAAGCTCCAGGTATCCAGGACACACAAGGGCAA AAATTGCAACCAGAAGTGCAATACTTACCAGCAAGATCCCCAGCACAAGATGTTCCGGTC CATGCTCCATCCCAACCACCTCAGGCTGGAAACCAAACACAGCCACAGCCTTACCCTCCT TACCAGCAGCAGTGGCACCAGCAATCCTCCCAGCCAGCTCCTGCACCGGTGGCCCAGACA CAGCAGACTTTCTCACAGCCATTTCCTCCACCCGCACAGCAGCCCCAGTTATCCAATGTG CAGCAGTTTCCACCGCAACCAGTACAGCAGCCCCAATCCAATGCTCAACAGTATCCTCCA CCAGTGCAACCACAGCAATCTAGCCCACAGCTTCCTCAGGCAATGCAACCACAACATCCT CCTATGCAAACTCAGATGAGACCTCAAACCCCACCAAACTACCCGCATTATCCACCCCAC CAGCCATTGAACCCCACCCCTGAAACTCTTCCTGGCAATGTGGCTATGCAAGGATCATAC AACACTGCTGTTCCATCAGGTGCCAACCGTCCTGAACTGCCATATTCGTATGGAGGGGCT GGCATCCCACTGTCTCAGTCTCAGCCACTGCCACAGCACAACATGCAAAGGCACCAGCTA CCACCTTCAAGTCAGGGCTCCTTTGGGCCACCTCCAAGCAAAGGGTCCTATGCTGGCTCT CCACAGTATGCACCACAGGGCAATCCGCAAGGCTACAGCACAGGTTACGCTTACCCACCA AACGGCCCTCCAGCAGTCCAGCCGCAACAGATGCCCCCTGGCGGAGTTGGCATGAGTCAT CCGGCTTCGCATATGATGCGTGGCCATCCCTACGGAGAAATGATGGAGAAGGCGATCACC ATGGGATACCCTAGGGACCAAGTGCTGAACGTCACCCAAAGGATGGCCGAGAGTGGCCAG TCAATGGATTTCAACACCTTGCTCGACAGGCTGAACGAAGCAGGGTCGGGAGCTCCACCC CCACGCGCGTGGTGA

Peptide Sequence

PEP ID	Zm00001d012728_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:179391080:179396140:1 gene:Zm00001d012728 transcript:Zm00001d012728_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DUF1421 domain family protein
Sequence	MSVPGAPAGGGSRSFDFGADDVLCSYDDFAASSEPKRPDPADSAPDFHDSRLGRPFVKPY EQESYGKEDVLSAVEKCMKKYADNLLRSLEGITSRLSQLEIYCYKLERSIGELRSDVLRD ETDHRLKSLEKHLNEVHRSIQILRDKQELAEAQKELAKFQLTQDTSKKKEDVPTSIPEQK KLEENPDTSNQQLALVLPHQVNLPSLAPRASESVQQYKNQPVQPSDPTPPVPQQDRYVLS QAIVYYPQRQAPGIQDTQGQKLQPEVQYLPARSPAQDVPVHAPSQPPQAGNQTQPQPYPP YQQQWHQQSSQPAPAPVAQTQQTFSQPFPPPAQQPQLSNVQQFPPQPVQQPQSNAQQYPP PVQPQQSSPQLPQAMQPQHPPMQTQMRPQTPPNYPHYPPHQPLNPTPETLPGNVAMQGSY NTAVPSGANRPELPYSYGGAGIPLSQSQPLPQHNMQRHQLPPSSQGSFGPPPSKGSYAGS PQYAPQGNPQGYSTGYAYPPNGPPAVQPQQMPPGGVGMSHPASHMMRGHPYGEMMEKAIT MGYPRDQVLNVTQRMAESGQSMDFNTLLDRLNEAGSGAPPPRAW

Transcript Sequence

Transcript ID	Zm00001d012728_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:179391080:179396140:1 gene:Zm00001d012728 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DUF1421 domain family protein
Sequence	AAACCGTCTAAGACGTCATCCTAATTCCTTCACGCTAATCTCTCTGCTTCCTCTGTTCCT TCCCTTTCCCCTCCTCCCCCTCCCGTTTTCCTTTCCCTTTTTCCTCCACACAAGCAACCT GCCGCCCGGGAAAAACCCTAGACCGGCGATGTCCGTCCCCGGCGCCCCCGCGGGCGGCGG TTCCCGCAGCTTCGACTTCGGCGCCGACGACGTGCTCTGCTCCTACGATGACTTCGCCGC CTCGTCCGAGCCCAAGCGCCCCGATCCGGCCGACAGTGCGCCCGATTTTCATGATAGCAG ATTGGGGAGGCCATTTGTGAAACCTTATGAACAAGAAAGTTATGGGAAAGAGGATGTGCT TTCTGCTGTTGAGAAATGCATGAAAAAGTATGCTGATAATTTGCTACGATCTCTTGAGGG AATCACTAGTCGGCTTTCGCAACTGGAGATTTATTGCTATAAGCTTGAGAGATCCATAGG TGAACTTCGAAGTGATGTGCTTCGTGATGAGACTGACCATAGGTTGAAGTCTCTTGAGAA ACATCTAAATGAAGTACACAGGTCTATCCAAATTCTTAGGGACAAACAGGAGTTAGCTGA AGCTCAGAAGGAATTGGCCAAATTTCAACTTACACAAGATACATCTAAAAAGAAGGAAGA TGTACCAACATCTATTCCTGAGCAAAAGAAGCTTGAAGAAAACCCTGACACATCAAACCA GCAATTGGCTCTTGTTTTGCCTCATCAGGTGAACCTGCCATCACTTGCCCCTAGAGCTTC TGAATCAGTCCAACAGTACAAGAATCAACCTGTGCAACCATCAGACCCAACCCCTCCCGT GCCACAGCAGGACCGCTATGTTCTTAGCCAAGCCATCGTCTACTACCCACAGCGCCAAGC TCCAGGTATCCAGGACACACAAGGGCAAAAATTGCAACCAGAAGTGCAATACTTACCAGC AAGATCCCCAGCACAAGATGTTCCGGTCCATGCTCCATCCCAACCACCTCAGGCTGGAAA CCAAACACAGCCACAGCCTTACCCTCCTTACCAGCAGCAGTGGCACCAGCAATCCTCCCA GCCAGCTCCTGCACCGGTGGCCCAGACACAGCAGACTTTCTCACAGCCATTTCCTCCACC CGCACAGCAGCCCCAGTTATCCAATGTGCAGCAGTTTCCACCGCAACCAGTACAGCAGCC CCAATCCAATGCTCAACAGTATCCTCCACCAGTGCAACCACAGCAATCTAGCCCACAGCT TCCTCAGGCAATGCAACCACAACATCCTCCTATGCAAACTCAGATGAGACCTCAAACCCC ACCAAACTACCCGCATTATCCACCCCACCAGCCATTGAACCCCACCCCTGAAACTCTTCC TGGCAATGTGGCTATGCAAGGATCATACAACACTGCTGTTCCATCAGGTGCCAACCGTCC TGAACTGCCATATTCGTATGGAGGGGCTGGCATCCCACTGTCTCAGTCTCAGCCACTGCC ACAGCACAACATGCAAAGGCACCAGCTACCACCTTCAAGTCAGGGCTCCTTTGGGCCACC TCCAAGCAAAGGGTCCTATGCTGGCTCTCCACAGTATGCACCACAGGGCAATCCGCAAGG CTACAGCACAGGTTACGCTTACCCACCAAACGGCCCTCCAGCAGTCCAGCCGCAACAGAT GCCCCCTGGCGGAGTTGGCATGAGTCATCCGGCTTCGCATATGATGCGTGGCCATCCCTA CGGAGAAATGATGGAGAAGGCGATCACCATGGGATACCCTAGGGACCAAGTGCTGAACGT CACCCAAAGGATGGCCGAGAGTGGCCAGTCAATGGATTTCAACACCTTGCTCGACAGGCT GAACGAAGCAGGGTCGGGAGCTCCACCCCCACGCGCGTGGTGATTGGATCCAGTTTGGGC GCCGTGCTTGGTGTCGGTTATGTGACTTACGACTGTTATCATGCAGCTAAATAAATAAGA TTTGGGTTGATGCCGTGTACTGCTTATCTGTACAATGTGCATATGTGATTTTTTTCTCCA TGTAACTGCCACTGGTACTACGAATGCATCGCACCAATTGGACTGTTCAGATATTATGTA TATATATTCCGATATTCGGAAGCAATTACTGGCAGGCATCCTACCATTTTTGTAGCGTGT CATGTGTCCGTTGCGTTGATGATGTGAACAACTGTTGTCCGTCGACTTCAGCTTGACGCT AAATTTTGTAAAGACTCTTTTGG