Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012720_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:179173501:179174214:-1 gene:Zm00001d012720 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase ATL41
Sequence

ATGTCGACGACGACGACGAAGGCGAGCGACCCGGGGTCCGCGTGGTTCGGCAGCGGTGCA
CGGACCCGGTCGGCGGCGGGGATAAGCCACAACGCGCGGCTCGTCACCACCGCGGTCGCC
GCGTTCGTGTCCGTGCTCGGCCTCGCCCTCTTCCTCCACCTCTACGTCTGCCACGTGCGC
CGCCGCAACCGCCGCCGCGCGGCGGCAGTGCTGCCGACGACCACGGCCGCCGCGGCGGCG
GCGGCGGCCCCGAAGCGCGGGCTGGATCCCGCGGCCGTCGCGGCGCTGCCGACCGTCCTC
TACAGGGACGCGGGCGGCGCCGACGATGGCGCCGAGTGCACCATCTGCCTCGGCGCCGTG
CAGGAAGGCGAGCTGGTGCGGGCGCTCCCGGCCTGCGGCCACGTGTTCCACGTCCCCTGC
GTCGACACCTGGTTCGCGTCCAGCTCGTCGTGCCCGGTCTGCCGCGCCGAGGTCGAGCCG
CCGCCGCCGCCGGCACTGAGCTCATCGGCTCTGTTCGTGCAGGCGGAGAAGGTGGTGCAG
GACGCCGTCAAGGAGGAGGCCGGCAGCTCCACGCCGGAGAGGGGGATCGGTGCCTGCGCG
TCGCTGATGAAGATGCTCAGCAGGGAGAGGCCGGCGCCGCGGAGGCCACACGCCGACGCC
GGGGACTTGGACGACTTGGAACGGCAGCAGCATTCTGTTGCCGTCAATAATTAG

Peptide Sequence

PEP ID

Zm00001d012720_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:179173501:179174214:-1 gene:Zm00001d012720 transcript:Zm00001d012720_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase ATL41
Sequence

MSTTTTKASDPGSAWFGSGARTRSAAGISHNARLVTTAVAAFVSVLGLALFLHLYVCHVR
RRNRRRAAAVLPTTTAAAAAAAAPKRGLDPAAVAALPTVLYRDAGGADDGAECTICLGAV
QEGELVRALPACGHVFHVPCVDTWFASSSSCPVCRAEVEPPPPPALSSSALFVQAEKVVQ
DAVKEEAGSSTPERGIGACASLMKMLSRERPAPRRPHADAGDLDDLERQQHSVAVNN

Transcript Sequence

Transcript ID

Zm00001d012720_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:179173501:179174214:-1 gene:Zm00001d012720 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase ATL41
Sequence

ATGTCGACGACGACGACGAAGGCGAGCGACCCGGGGTCCGCGTGGTTCGGCAGCGGTGCA
CGGACCCGGTCGGCGGCGGGGATAAGCCACAACGCGCGGCTCGTCACCACCGCGGTCGCC
GCGTTCGTGTCCGTGCTCGGCCTCGCCCTCTTCCTCCACCTCTACGTCTGCCACGTGCGC
CGCCGCAACCGCCGCCGCGCGGCGGCAGTGCTGCCGACGACCACGGCCGCCGCGGCGGCG
GCGGCGGCCCCGAAGCGCGGGCTGGATCCCGCGGCCGTCGCGGCGCTGCCGACCGTCCTC
TACAGGGACGCGGGCGGCGCCGACGATGGCGCCGAGTGCACCATCTGCCTCGGCGCCGTG
CAGGAAGGCGAGCTGGTGCGGGCGCTCCCGGCCTGCGGCCACGTGTTCCACGTCCCCTGC
GTCGACACCTGGTTCGCGTCCAGCTCGTCGTGCCCGGTCTGCCGCGCCGAGGTCGAGCCG
CCGCCGCCGCCGGCACTGAGCTCATCGGCTCTGTTCGTGCAGGCGGAGAAGGTGGTGCAG
GACGCCGTCAAGGAGGAGGCCGGCAGCTCCACGCCGGAGAGGGGGATCGGTGCCTGCGCG
TCGCTGATGAAGATGCTCAGCAGGGAGAGGCCGGCGCCGCGGAGGCCACACGCCGACGCC
GGGGACTTGGACGACTTGGAACGGCAGCAGCATTCTGTTGCCGTCAATAATTAG