Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012693_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:8:178730636:178734134:-1 gene:Zm00001d012693 gene_biotype:protein_coding transcript_biotype:protein_coding description:Solute carrier family 23 member 2

Sequence

ATGCTGATCCTCTTTGTCGTGCTGTCTCAGTATCTGAAGAACATACAGATAAAAGAAATC
CCCATACTGGAAAGGTTCTCCCTTTTCATCTGTGTCGCGTTGGTATGGGCGTACGCTCAG
ATCCTCACTTCAGGTGGAGCCTATAAGAACAGCGCCGAGGTCACCCAGAACAACTGCCGC
ACCGACAGAGCCAATCTCATCTCTTCTGCCCCATGGATTAAGATCCCCTACCCACTGCAA
TGGGGTGCGCCGACCTTCAACGCCGGCCAGTCATTTGGGATTGTGTCTGCTGTTTTGGTC
TCGCTGGTAGAGTCCACAGCCTCCTACAAAGCCGCTGCTCGTCTTGCGAGTGCGACTCCA
CCTCCGGCTCACATCCTCAGCAGAGGCATTGGGTGGCAGGGAATCGGCATCCTCCTTGAC
GGGCTCTTTGGAACGGGGACTGGCTCCACTGTCTCAGTGGAGAACGTCGGGTTGCTTGGG
TCGACAAGGATCGGGAGCCGACGGGTCATACAGATCTCAGCTGGCTTCATGATCTTTTTC
TCCATGCTGGGGAAATTTGGAGCCTTGTTCGCTTCCATCCCGTTCACCATCTTTGCGGCC
GTGTACTGCGTCCTGTTCGGGCTAGTTGCTGCGGTGGGGCTGTCCTTCCTACAGTTCACT
AACATGAACTCCATGCGCAACCTCTTTATCGTCGGCGTCTCCATCTTCCTTGGCCTGTCC
GTCCCGGAATACTTTTTCCGCTACACCATGGCTGCTCATCGTGGTCCTGCGCACACGAAA
GCTGGATGGTTCAACGACTACATCAACACCATCTTCTCGTCGCCGCCGACCGTGGGGCTG
ATGGTGGCCGTGTTCCTGGACAACACGCTGGAGGTGAAGCAAGCCGGCATGGACCGGGGG
ATGCCGTGGTGGCAGCGGTTCCGGACGTTCAAGGGCGACAGCAGGAACGAGGAGTTCTAC
CGCCTGCCATTCAACCTCAACCGCTTCTTCCCTCCGGCCTAA

Peptide Sequence

PEP ID

Zm00001d012693_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:8:178730636:178734134:-1 gene:Zm00001d012693 transcript:Zm00001d012693_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Solute carrier family 23 member 2

Sequence

MLILFVVLSQYLKNIQIKEIPILERFSLFICVALVWAYAQILTSGGAYKNSAEVTQNNCR
TDRANLISSAPWIKIPYPLQWGAPTFNAGQSFGIVSAVLVSLVESTASYKAAARLASATP
PPAHILSRGIGWQGIGILLDGLFGTGTGSTVSVENVGLLGSTRIGSRRVIQISAGFMIFF
SMLGKFGALFASIPFTIFAAVYCVLFGLVAAVGLSFLQFTNMNSMRNLFIVGVSIFLGLS
VPEYFFRYTMAAHRGPAHTKAGWFNDYINTIFSSPPTVGLMVAVFLDNTLEVKQAGMDRG
MPWWQRFRTFKGDSRNEEFYRLPFNLNRFFPPA

Transcript Sequence

Transcript ID

Zm00001d012693_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:178730636:178734134:-1 gene:Zm00001d012693 gene_biotype:protein_coding transcript_biotype:protein_coding description:Solute carrier family 23 member 2

Sequence

ACGAGACAAAAGACGCCCGCCCCGGCCGGCGACCAGTACCTCGCCATTGCTAGTGCTAGC
CGCCGTCGCTGGTGTCCCCTCCTCCCACTTGCGCCGCCTGTCCCCGCGCCCTCGAAACCT
TTTCTCCCAAAACAGATTTCGTCCCGGCGCTCTCCTGCAAAGGGCGGCTAGCTGTCGCCG
GTGGATACGTTTCACCTTGCTTGGGTTCTGCTTCTTCCTGCTTTTCCAAGAGAGGGCCAG
CAGCAGACGAAGCGAGCAAAGCGCGCAGGAACCGCTCGGTCTGGTGATTTTAAGGGGCGA
GGTCGTGTTCTTGGGAGGCGGAGAGACACGAGCTCTCTCTTCCTGTCCTCTTTCCCGCGG
CTTCTCTCTTGTCTTGCTCCAAGAGGGCAAAACTCGTCGGGGTAGGGAAATGGCGGAGGT
GAAGCCGGAGGAGATAAGCCATCCGCCCATGGAGCAGCTCCAGGGGTTCGAGTACTGCAT
CGACTCCAACCCTCCCTGGGGCGAGGCGATCATACTGGGCTTCCAGCACTACATACTGGC
GCTGGGCACGGCGGTGATGATCCCGACAGTGTTGGTTCCCATGATGGGCGGCGACGATGG
GGACAGGGTCAGGGTGGTGCAGACGCTGCTGTTCGTGACGGGGATAAACACGCTGCTGCA
GTCCCTCTTCGGGACCCGGCTGCCGACGGTCATCGGCGGCTCCTACGCGTTCGTCATCCC
GATAATGGCCATCATCCAGGACCCGTCGCTTTCTGGGATACCCGACGGTCATGAGAGGTT
CCTCGAGACCATGAAGGCCATACAGGGGGCACTGATAGTGTCCTCCAGCATTCAGATCAT
TCTGGGCTACAGCCAGCTGTGGGGTATTTTCTCCAGGTCGCTTTCCACCCCCATTTCGTG
TTCCCAACGTGGGTATGCTGACGAGGAATGGCTTGCTCATCCGATTGATGTCTGATAATT
GCATCAGGTTGGGAGATGCGTTGAGATTGGCCTGCCAATGCTGATCCTCTTTGTCGTGCT
GTCTCAGTATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGGAAAGGTTCTCCCT
TTTCATCTGTGTCGCGTTGGTATGGGCGTACGCTCAGATCCTCACTTCAGGTGGAGCCTA
TAAGAACAGCGCCGAGGTCACCCAGAACAACTGCCGCACCGACAGAGCCAATCTCATCTC
TTCTGCCCCATGGATTAAGATCCCCTACCCACTGCAATGGGGTGCGCCGACCTTCAACGC
CGGCCAGTCATTTGGGATTGTGTCTGCTGTTTTGGTCTCGCTGGTAGAGTCCACAGCCTC
CTACAAAGCCGCTGCTCGTCTTGCGAGTGCGACTCCACCTCCGGCTCACATCCTCAGCAG
AGGCATTGGGTGGCAGGGAATCGGCATCCTCCTTGACGGGCTCTTTGGAACGGGGACTGG
CTCCACTGTCTCAGTGGAGAACGTCGGGTTGCTTGGGTCGACAAGGATCGGGAGCCGACG
GGTCATACAGATCTCAGCTGGCTTCATGATCTTTTTCTCCATGCTGGGGAAATTTGGAGC
CTTGTTCGCTTCCATCCCGTTCACCATCTTTGCGGCCGTGTACTGCGTCCTGTTCGGGCT
AGTTGCTGCGGTGGGGCTGTCCTTCCTACAGTTCACTAACATGAACTCCATGCGCAACCT
CTTTATCGTCGGCGTCTCCATCTTCCTTGGCCTGTCCGTCCCGGAATACTTTTTCCGCTA
CACCATGGCTGCTCATCGTGGTCCTGCGCACACGAAAGCTGGATGGTTCAACGACTACAT
CAACACCATCTTCTCGTCGCCGCCGACCGTGGGGCTGATGGTGGCCGTGTTCCTGGACAA
CACGCTGGAGGTGAAGCAAGCCGGCATGGACCGGGGGATGCCGTGGTGGCAGCGGTTCCG
GACGTTCAAGGGCGACAGCAGGAACGAGGAGTTCTACCGCCTGCCATTCAACCTCAACCG
CTTCTTCCCTCCGGCCTAAAAGTCAAGTCACTCAGACTCAGATTGCTGAGCAGAGGCATA
GTGTAGCTTATTTATTGTTCCATTCGTTCATCTCTACTTGTTCGTGTTGTAGATTATTTT
GGGGAGGTTCAGTAAGTATACTTACTGCC