Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012687_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:178645606:178650028:1 gene:Zm00001d012687 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phospholipase%2C patatin family protein
Sequence	ATGGATGACATCGCCAGCGAGGCGCCCGTGGGGGCGTTCGCCATCGGCCCATCCACGGCG CTGGGCGGCGCCGTCGCGCTCCGGGTGCTGCTCTGCGGCTCCGCGGCGCGCCTGCGTCAT CGTCTAGCCGCGGCACTGCGCGCCGCGCTGCCCGTCGCGGCGGCGTGGCTGCACCCGCGC GACAACACGCGCGGGATCCTGCTCGCCGTCTGCGCCGTCGCGCTCCTGCTGCGGGGCCGA CGCGGCAGGGCGGGGCTGCGGGCGAGGGTGCAGTCCGCCTACCGCTGCAAGTTCTGGCGG AACATGATGCGCGCCGCGCTCACCTACGAGGAGTGGGCGCACGCGGCGCGGATGCTGGAG CTCGAGGCCGCGCCGCGCCGCGCCAGCGACGCCGACCTCTACGACGAGGAGCTCGTCCGC AATAAGCTCCGCGAGCTCAGGCACCGGCGCCAGGAGGGATCGCTCAGGGACATCGTCTTC TGCATGCGTGCTGACCTGCTCAGGAACCTCGGCAATATGTGCAACCCTGAACTGCACAAG GGGAGGCTGCAGGTGCCTAGACTCATAAAGGAATACATTGAGGAAGTATCTACTCAACTG AAAATGGTCTGTGATTCTGATTCAGATGAGTTGCCTCTCGAAGAGAAACTCGCATTTATG CATGAGACAAGACATGCCTTTGGTAGAACAGCCTTGCTGCTAAGTGGAGGTGCTTCGTTA GGATCCTTTCATGTGGGTGTTGTTAAAACCTTGGTAGAACATAAACTTCTGCCAAGGATA GTTTCAGGATCAAGTGTAGGCTCAATAATGTGTTCTATAGTAGCAACAAGATCATGGCCT GAGCTGGAGAGCTTTTTTGAAGAGTGGCATTCCCTGAAATTTTTTGACCAGATGGGTGGA ATCTTTCCTGTGGTTAAAAGAATTTTGACGCATGGCGCTCTTCATGATATAAGGCACTTG CAGGTGCTTTTGAGAAACCTTACCAGCAATCTGACATTTCAAGAAGCTTATGACATTACT GGTCGGATTCTTGTTGTCACTGTGTGTTCTCCAAGGAAGCATGAGCCGCCTCGATGCCTA AACTATTTAACATCACCTCATGTTCTTATCTGGAGTGCAGTAACAGCTTCCTGCGCTTTT CCTGGACTTTTTGAGGCCCAAGAATTGATGGCAAAAGATAGATTTGGTCAAACCATTCCT TTCCATGCTCCATTCTTATTAGGCATGGAGGAACGAACTGTTGCTCCAACCCGCCGCTGG AGAGATGGGAGCTTAGAAAGCGATTTACCCATGAAGCAATTGAAGGAACTATTCAATGTG AATCATTTCATAGTAAGTCAAGCCAATCCTCACATAGCTCCACTATTGAGACTAAAGGAA ATCATCAGGGCTTATGGAGGCAGCTTTGCTGCCAAGCTTGCTGAACTTGCCGAGATGGAA GTTAAACATAGGTGTAATCAAGTTCTGGAACTTGGATTCCCTTTAGGAGGATTAGCTAAA CTATTTGCTCAAGATTGGGAAGGTGATGTTACAGTTGTTATGCCAGCCACTCTTGCACAG TATTCCAAGATGATACAAAACCCGTCTTATGCTGAGCTTCAGAAGGCTGCGAATCAAGGT AGGAGATGCACTTGGGAAAAGTTATCAGCCATCAGGGCAAATTGTGCTATTGAGCTTGCA CTGGATGAATGTGTTGCCCTCCTGAACCACTTGCGTAGGCTAAAGAGGAGTGCAGAAAGA GCATCCGCATCGCAAGGATATGGTCCAGTAATCAGGTTCTGCCCATCTAGGAGGATTCCA TCCTGGAATCTCATAGCGAGAGAAAATTCAACTGGTTCTCTTGATGAAGAAATGCTCGCA TCTCCTCATACAAATCATCAAGGACCTGGAGGAGTTGCTGGAACATCTACCAGAAATCAG TATCTTCAGAGAAATGCACACGAGAGCAGTGACAGTGAATCTGAGAGTATTGATTTACAC TCTTGGACAAGAAATGGTGGCCCTCTTATGAGGACAGCCTCAGCCAATAAATTCATCAGC TTTGTTCAGAATCTTGAGATCGACACAGAATTCAGAACAATTCCATCGAGGGAAAACCTA ACTGATCTTGTGACACCAAATGCTGGTACCTTGGCAGCTCATGCAGTGAGTAGAGAAGCA ACCGATAGGAGCTTGGACATTTCAGCTTTAGATATCCATGATACCGCTACCCCTAGATCG ACATTTGGCCGTTCAACAAGCATCGTTGTTTCTGAAGGTGACTTGTTGCAGCCTGAAAAG ATTGAAAATGGTATTTTGTTTAATGTTGTAAGGAGGGATACTCTGCTGGAGTCTAGTAGC GGAGTTGAGTCTCAAGGATCTCCTCGGGAACCAGATGTTGAAACAGTGCAGACAGAGTGC CTTGATGGCATTTCAGCTTCCGATGACGACGACAAGGAACTAAATGTCATTGTTGATGAA GCAACCGATCCCATGAGCAGCAATAATCTACAAGATCAGGGGTCCTCACTGGAAGAAAAT TCATATAGTCATTTTCCCTTAAATTCTGCAGACGAGACAAGCACAAACAAACCAGAAACT GCATCTATTTTTGATATATGTACAGAGATGCATCCGGCGTCCATTAGCCTACCGCAAGGA TCTTCAGAAAAGGCAGAACTCTGA

Peptide Sequence

PEP ID	Zm00001d012687_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:178645606:178650028:1 gene:Zm00001d012687 transcript:Zm00001d012687_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phospholipase%2C patatin family protein
Sequence	MDDIASEAPVGAFAIGPSTALGGAVALRVLLCGSAARLRHRLAAALRAALPVAAAWLHPR DNTRGILLAVCAVALLLRGRRGRAGLRARVQSAYRCKFWRNMMRAALTYEEWAHAARMLE LEAAPRRASDADLYDEELVRNKLRELRHRRQEGSLRDIVFCMRADLLRNLGNMCNPELHK GRLQVPRLIKEYIEEVSTQLKMVCDSDSDELPLEEKLAFMHETRHAFGRTALLLSGGASL GSFHVGVVKTLVEHKLLPRIVSGSSVGSIMCSIVATRSWPELESFFEEWHSLKFFDQMGG IFPVVKRILTHGALHDIRHLQVLLRNLTSNLTFQEAYDITGRILVVTVCSPRKHEPPRCL NYLTSPHVLIWSAVTASCAFPGLFEAQELMAKDRFGQTIPFHAPFLLGMEERTVAPTRRW RDGSLESDLPMKQLKELFNVNHFIVSQANPHIAPLLRLKEIIRAYGGSFAAKLAELAEME VKHRCNQVLELGFPLGGLAKLFAQDWEGDVTVVMPATLAQYSKMIQNPSYAELQKAANQG RRCTWEKLSAIRANCAIELALDECVALLNHLRRLKRSAERASASQGYGPVIRFCPSRRIP SWNLIARENSTGSLDEEMLASPHTNHQGPGGVAGTSTRNQYLQRNAHESSDSESESIDLH SWTRNGGPLMRTASANKFISFVQNLEIDTEFRTIPSRENLTDLVTPNAGTLAAHAVSREA TDRSLDISALDIHDTATPRSTFGRSTSIVVSEGDLLQPEKIENGILFNVVRRDTLLESSS GVESQGSPREPDVETVQTECLDGISASDDDDKELNVIVDEATDPMSSNNLQDQGSSLEEN SYSHFPLNSADETSTNKPETASIFDICTEMHPASISLPQGSSEKAEL

Transcript Sequence

Transcript ID	Zm00001d012687_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:178645606:178650028:1 gene:Zm00001d012687 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phospholipase%2C patatin family protein
Sequence	ACGCACGCGGCTGTTTTCCCCATCCTTCCACTCCACCTCCGCAAGAACGGCGAGAGAGCG CACCCAAACCAGAGACACCTACGGCGGGTCGGCGGCCGACCCCGGGGCCGCGCCCATCCC GACGTTTTCCCGATTCTCCGGCTACCTCCTCCCTTATCTCCTTGCGCGTGACGCGCCCAC GACTCCTCGTCGTCCTCTTGTGATCTGGTCCCCATCTCGCTGCCGCCTCCTCCCGACTTA CCAAACTCCAACACGCCATGCGACCATGCGCTCATGCATAGCATAGATATAGCTGTAGCC AAGCTGCCCAAGCACGAGCACCACTCGTCTTCTCCGACCTTCCAGCTCTAGCTCTGATCC GAGCCGAAACAGCCATCCAAGACGCCCGCGGCCGCCGTGAGCGGGTGACCCTCTGCGCTG CGCTGCGTCACCACCCAAATGGATGACATCGCCAGCGAGGCGCCCGTGGGGGCGTTCGCC ATCGGCCCATCCACGGCGCTGGGCGGCGCCGTCGCGCTCCGGGTGCTGCTCTGCGGCTCC GCGGCGCGCCTGCGTCATCGTCTAGCCGCGGCACTGCGCGCCGCGCTGCCCGTCGCGGCG GCGTGGCTGCACCCGCGCGACAACACGCGCGGGATCCTGCTCGCCGTCTGCGCCGTCGCG CTCCTGCTGCGGGGCCGACGCGGCAGGGCGGGGCTGCGGGCGAGGGTGCAGTCCGCCTAC CGCTGCAAGTTCTGGCGGAACATGATGCGCGCCGCGCTCACCTACGAGGAGTGGGCGCAC GCGGCGCGGATGCTGGAGCTCGAGGCCGCGCCGCGCCGCGCCAGCGACGCCGACCTCTAC GACGAGGAGCTCGTCCGCAATAAGCTCCGCGAGCTCAGGCACCGGCGCCAGGAGGGATCG CTCAGGGACATCGTCTTCTGCATGCGTGCTGACCTGCTCAGGAACCTCGGCAATATGTGC AACCCTGAACTGCACAAGGGGAGGCTGCAGGTGCCTAGACTCATAAAGGAATACATTGAG GAAGTATCTACTCAACTGAAAATGGTCTGTGATTCTGATTCAGATGAGTTGCCTCTCGAA GAGAAACTCGCATTTATGCATGAGACAAGACATGCCTTTGGTAGAACAGCCTTGCTGCTA AGTGGAGGTGCTTCGTTAGGATCCTTTCATGTGGGTGTTGTTAAAACCTTGGTAGAACAT AAACTTCTGCCAAGGATAGTTTCAGGATCAAGTGTAGGCTCAATAATGTGTTCTATAGTA GCAACAAGATCATGGCCTGAGCTGGAGAGCTTTTTTGAAGAGTGGCATTCCCTGAAATTT TTTGACCAGATGGGTGGAATCTTTCCTGTGGTTAAAAGAATTTTGACGCATGGCGCTCTT CATGATATAAGGCACTTGCAGGTGCTTTTGAGAAACCTTACCAGCAATCTGACATTTCAA GAAGCTTATGACATTACTGGTCGGATTCTTGTTGTCACTGTGTGTTCTCCAAGGAAGCAT GAGCCGCCTCGATGCCTAAACTATTTAACATCACCTCATGTTCTTATCTGGAGTGCAGTA ACAGCTTCCTGCGCTTTTCCTGGACTTTTTGAGGCCCAAGAATTGATGGCAAAAGATAGA TTTGGTCAAACCATTCCTTTCCATGCTCCATTCTTATTAGGCATGGAGGAACGAACTGTT GCTCCAACCCGCCGCTGGAGAGATGGGAGCTTAGAAAGCGATTTACCCATGAAGCAATTG AAGGAACTATTCAATGTGAATCATTTCATAGTAAGTCAAGCCAATCCTCACATAGCTCCA CTATTGAGACTAAAGGAAATCATCAGGGCTTATGGAGGCAGCTTTGCTGCCAAGCTTGCT GAACTTGCCGAGATGGAAGTTAAACATAGGTGTAATCAAGTTCTGGAACTTGGATTCCCT TTAGGAGGATTAGCTAAACTATTTGCTCAAGATTGGGAAGGTGATGTTACAGTTGTTATG CCAGCCACTCTTGCACAGTATTCCAAGATGATACAAAACCCGTCTTATGCTGAGCTTCAG AAGGCTGCGAATCAAGGTAGGAGATGCACTTGGGAAAAGTTATCAGCCATCAGGGCAAAT TGTGCTATTGAGCTTGCACTGGATGAATGTGTTGCCCTCCTGAACCACTTGCGTAGGCTA AAGAGGAGTGCAGAAAGAGCATCCGCATCGCAAGGATATGGTCCAGTAATCAGGTTCTGC CCATCTAGGAGGATTCCATCCTGGAATCTCATAGCGAGAGAAAATTCAACTGGTTCTCTT GATGAAGAAATGCTCGCATCTCCTCATACAAATCATCAAGGACCTGGAGGAGTTGCTGGA ACATCTACCAGAAATCAGTATCTTCAGAGAAATGCACACGAGAGCAGTGACAGTGAATCT GAGAGTATTGATTTACACTCTTGGACAAGAAATGGTGGCCCTCTTATGAGGACAGCCTCA GCCAATAAATTCATCAGCTTTGTTCAGAATCTTGAGATCGACACAGAATTCAGAACAATT CCATCGAGGGAAAACCTAACTGATCTTGTGACACCAAATGCTGGTACCTTGGCAGCTCAT GCAGTGAGTAGAGAAGCAACCGATAGGAGCTTGGACATTTCAGCTTTAGATATCCATGAT ACCGCTACCCCTAGATCGACATTTGGCCGTTCAACAAGCATCGTTGTTTCTGAAGGTGAC TTGTTGCAGCCTGAAAAGATTGAAAATGGTATTTTGTTTAATGTTGTAAGGAGGGATACT CTGCTGGAGTCTAGTAGCGGAGTTGAGTCTCAAGGATCTCCTCGGGAACCAGATGTTGAA ACAGTGCAGACAGAGTGCCTTGATGGCATTTCAGCTTCCGATGACGACGACAAGGAACTA AATGTCATTGTTGATGAAGCAACCGATCCCATGAGCAGCAATAATCTACAAGATCAGGGG TCCTCACTGGAAGAAAATTCATATAGTCATTTTCCCTTAAATTCTGCAGACGAGACAAGC ACAAACAAACCAGAAACTGCATCTATTTTTGATATATGTACAGAGATGCATCCGGCGTCC ATTAGCCTACCGCAAGGATCTTCAGAAAAGGCAGAACTCTGAAACAGCAAAGATCCCTGA CGACGATTCAGCTGCTATGAGTGATGAAGTTGCCTCATGTGCTGGTAACTAAAGAGTTGT CCTCCTCCCTCTAGCTTTGAGGCATCAGATGTAAGTGATGTACTATAATCTAAGCATCAT GAATTGGATGGTGAAGCTTTATGTTGTTCAAGTTTCAGAAGAAGGAGATCCAATGGCTTT GGTTCTTCGAATGTACTGTAGTTGTTTTGGGGAAATAAAGCGCTTCTTAGAAAAACCCGG GAGAAGTTTTGCG