Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012681_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:8:178523414:178531003:-1 gene:Zm00001d012681 gene_biotype:protein_coding transcript_biotype:protein_coding description:RHOMBOID-like protein 12 mitochondrial
Sequence

ATGCGGAGGAAGCTGCTGCAGTTCCCGTCCCTCGTCGCGCAGCACGCCCTCCGCGGGGCC
CCAACACCCAGATTCCAACCCCAGCCCCACCACCACCGCTTCCTGCACTCCCCCTCCGCG
CCCACATCCGCATCCCCTTCCTCCTCCCCGTCGGCCCACCTCATATGGAATCGCCTCTCC
GGCTCTACCGGGATCTCTCCCTTACCGAGGACCGCCGCGGACGTCGCAGCGGCCGCGCGG
ACCGCCGCGTCCCGGTGGTTGGCCACCGCGCGCGGCGCCCGCTCTCTCGATCTCTTCTCG
CTGCCGCGGTGGCGCAGGGCCTCGGGGCGGCAGTTCTCGCCTTCCCCTTTCCTCCAAGGC
GCGACCTGGGCGTCCTGGATGGAGTCCGCCGACGGGGCGGTGTGGATGCTCATCGGTGCG
AATGTTGCTGTCTTCCTGCTGTGGCGTGTGGCCGATCCAGGGTTCATGAGGAAGCATTTC
ATGATTTCACTGGACAATTTCAAGAGTGGACGGTTGCACACCTTGCTCACGAGTGCTTTC
AGCCATGCAGAGTTTAATCACCTCTTTGCCAATATGTTTGGCCTCTTCTTCTTTGGGAGC
AGTATTACGAATGTGTTTGGTCCTGCCTTTCTATTGAAGTTGTATGTTGGTGGAGCACTT
ACTGGATCAGTATTCTTCTTGCTGGAGAAGGCTTTTCTAGCCTATCGGAAACAGGATTAT
GTAGGATGGGATACTTCAAGAGCTGCTGAACTTGGTGCAAGTGCTGCAGTTAATGCAACT
ATGCTTCTTCAAATTTTTCTGTATCCCAAGGGACTAGTGTATATTTACTTTGTCATTCCT
GTTCCAGCTGCACTTATGGGCGCAGGTTTGATTGGTGCTGATTTAGTGAGGTTGAAGAGG
CATGGCGATGTATCAGGTTCAGCTCCTTTAGGGGGCGCCCTGGCTGCTGCTCTTGTGTGG
GCTCGAATTAGGAAAGGCTGGATCTGA

Peptide Sequence

PEP ID

Zm00001d012681_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:8:178523414:178531003:-1 gene:Zm00001d012681 transcript:Zm00001d012681_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:RHOMBOID-like protein 12 mitochondrial
Sequence

MRRKLLQFPSLVAQHALRGAPTPRFQPQPHHHRFLHSPSAPTSASPSSSPSAHLIWNRLS
GSTGISPLPRTAADVAAAARTAASRWLATARGARSLDLFSLPRWRRASGRQFSPSPFLQG
ATWASWMESADGAVWMLIGANVAVFLLWRVADPGFMRKHFMISLDNFKSGRLHTLLTSAF
SHAEFNHLFANMFGLFFFGSSITNVFGPAFLLKLYVGGALTGSVFFLLEKAFLAYRKQDY
VGWDTSRAAELGASAAVNATMLLQIFLYPKGLVYIYFVIPVPAALMGAGLIGADLVRLKR
HGDVSGSAPLGGALAAALVWARIRKGWI

Transcript Sequence

Transcript ID

Zm00001d012681_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:178523414:178531003:-1 gene:Zm00001d012681 gene_biotype:protein_coding transcript_biotype:protein_coding description:RHOMBOID-like protein 12 mitochondrial
Sequence

AAGGAATCCGGCGGTTACCGATCGAGACTAGTTCCAACCAGGAGTTGGAAACGAAACCTC
CACCCAGGAACCCCTGCTCGAGCCGGCGGAGGCGGCGGCCGGAGCAGATTAACAGAGCTT
TTCGAGCTTGCAAGGAGGATTCAACATGCGGAGGAAGCTGCTGCAGTTCCCGTCCCTCGT
CGCGCAGCACGCCCTCCGCGGGGCCCCAACACCCAGATTCCAACCCCAGCCCCACCACCA
CCGCTTCCTGCACTCCCCCTCCGCGCCCACATCCGCATCCCCTTCCTCCTCCCCGTCGGC
CCACCTCATATGGAATCGCCTCTCCGGCTCTACCGGGATCTCTCCCTTACCGAGGACCGC
CGCGGACGTCGCAGCGGCCGCGCGGACCGCCGCGTCCCGGTGGTTGGCCACCGCGCGCGG
CGCCCGCTCTCTCGATCTCTTCTCGCTGCCGCGGTGGCGCAGGGCCTCGGGGCGGCAGTT
CTCGCCTTCCCCTTTCCTCCAAGGCGCGACCTGGGCGTCCTGGATGGAGTCCGCCGACGG
GGCGGTGTGGATGCTCATCGGTGCGAATGTTGCTGTCTTCCTGCTGTGGCGTGTGGCCGA
TCCAGGGTTCATGAGGAAGCATTTCATGATTTCACTGGACAATTTCAAGAGTGGACGGTT
GCACACCTTGCTCACGAGTGCTTTCAGCCATGCAGAGTTTAATCACCTCTTTGCCAATAT
GTTTGGCCTCTTCTTCTTTGGGAGCAGTATTACGAATGTGTTTGGTCCTGCCTTTCTATT
GAAGTTGTATGTTGGTGGAGCACTTACTGGATCAGTATTCTTCTTGCTGGAGAAGGCTTT
TCTAGCCTATCGGAAACAGGATTATGTAGGATGGGATACTTCAAGAGCTGCTGAACTTGG
TGCAAGTGCTGCAGTTAATGCAACTATGCTTCTTCAAATTTTTCTGTATCCCAAGGGACT
AGTGTATATTTACTTTGTCATTCCTGTTCCAGCTGCACTTATGGGCGCAGGTTTGATTGG
TGCTGATTTAGTGAGGTTGAAGAGGCATGGCGATGTATCAGGTTCAGCTCCTTTAGGGGG
CGCCCTGGCTGCTGCTCTTGTGTGGGCTCGAATTAGGAAAGGCTGGATCTGATCTTCTAA
TGTCATATATGTGGATGGAAAGTGCAAAGGCAATTGGGTTTCTGCTCCTGGATCTGCAGT
CACCTTCTGGCTTATTGGGTTGAAATTTGCAATTGTTATCAGATAATTTGCTTAGAATTG
AGAGGATACCTTATAAAACATACTCTATCCCTGCATTCTTTTTTATTTGTCGTGGTTTAG
TTTAAAAACAAACTAGCGGACGATAAATATTTGAGAGCAGAGGTAGTACTACTTTCTGTT
CTCGTGGGCTCTGGGCTGGGCTTCTGGAGGATATTGTCAACTCTGTCAGCTGAAATTTTT
AGAGTCCAGTGAGCTTTTCTGGCAAAGCTGTTACAAAAAACCATTTGGCAAAATGACTTC
TACACTGTTTTTTTT