Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012672_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:8:178362968:178366631:1 gene:Zm00001d012672 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Pentatricopeptide (PPR) repeat protein-like
Sequence

ATGGCTCCTCTGACTCCTAGACTGGTAGTGCCCATAGACGTGAAGAAGCAGCCATGGGAG
CAGAAGGTTCCTCTCCACAACCGCTGGCATCCAGACATCCCTCCCGTTGCTGATGTAACC
GAAGGGGAACTGTTCCGGGTCGAGATGGTAGACTGGACTGGAGGGAGGGTTAGAGACGAT
AACTCTGCAGACGACATCAAATCCCTGGACCTCACAATCGTAAGTTTACTGACTACAGAT
ACTCTACAGACTCATTATCTTAGTGGGCCCCTAAGAATCGTTGATTCCGAAGGGGTTCCG
GCTTCACCAGGCGATCTTCTCGCGGTGGAAATCTGCAACCTTGGCCCGCTTCCTGGCGAC
GAGTGGGGCTACACTGCGATATTTGAGAGAGAGAACGGAGGTGGGTTCCTAACTGACCAC
TTCCCTACTGCGAGGAAGGCCATCTGGTATTTCGAAGGAATCTATGCGTACTCCCCTCAG
ATACCAGGTGTTCGTTTCCCAGGATTAACCCATCCTGGTATTGTGGGAACTGCACCGTCA
GCCGAACTTCTTAATATATGGAACGAGAGGGAGAAAAGATTGGCCGAGACAAGCCCACAG
ACCCTTAAACTGTGTGAAGTGCTACACCAGAGGCCCCTTGCCAATTTACCGACCCCTGAG
AACTGCTTACTTGGAAAGGCATGA

Peptide Sequence

PEP ID

Zm00001d012672_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:8:178362968:178366631:1 gene:Zm00001d012672 transcript:Zm00001d012672_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Pentatricopeptide (PPR) repeat protein-like
Sequence

MAPLTPRLVVPIDVKKQPWEQKVPLHNRWHPDIPPVADVTEGELFRVEMVDWTGGRVRDD
NSADDIKSLDLTIVSLLTTDTLQTHYLSGPLRIVDSEGVPASPGDLLAVEICNLGPLPGD
EWGYTAIFERENGGGFLTDHFPTARKAIWYFEGIYAYSPQIPGVRFPGLTHPGIVGTAPS
AELLNIWNEREKRLAETSPQTLKLCEVLHQRPLANLPTPENCLLGKA

Transcript Sequence

Transcript ID

Zm00001d012672_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:178362968:178366631:1 gene:Zm00001d012672 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Pentatricopeptide (PPR) repeat protein-like
Sequence

ATGGCTCCTCTGACTCCTAGACTGGTAGTGCCCATAGACGTGAAGAAGCAGCCATGGGAG
CAGAAGGTTCCTCTCCACAACCGCTGGCATCCAGACATCCCTCCCGTTGCTGATGTAACC
GAAGGGGAACTGTTCCGGGTCGAGATGGTAGACTGGACTGGAGGGAGGGTTAGAGACGAT
AACTCTGCAGACGACATCAAATCCCTGGACCTCACAATCGTAAGTTTACTGACTACAGAT
ACTCTACAGACTCATTATCTTAGTGGGCCCCTAAGAATCGTTGATTCCGAAGGGGTTCCG
GCTTCACCAGGCGATCTTCTCGCGGTGGAAATCTGCAACCTTGGCCCGCTTCCTGGCGAC
GAGTGGGGCTACACTGCGATATTTGAGAGAGAGAACGGAGGTGGGTTCCTAACTGACCAC
TTCCCTACTGCGAGGAAGGCCATCTGGTATTTCGAAGGAATCTATGCGTACTCCCCTCAG
ATACCAGGTGTTCGTTTCCCAGGATTAACCCATCCTGGTATTGTGGGAACTGCACCGTCA
GCCGAACTTCTTAATATATGGAACGAGAGGGAGAAAAGATTGGCCGAGACAAGCCCACAG
ACCCTTAAACTGTGTGAAGTGCTACACCAGAGGCCCCTTGCCAATTTACCGACCCCTGAG
AACTGCTTACTTGGAAAGGCATGAGCACCCACCTGCTTATAGTGTTGCTTCTAGAATTGT
ATTTTTCATACCTGAACGATTAATCTTTTTTTTGTCACCTAAAAGCAACACTAATCTGTC
AGACATAAGTATAACTTGCTACCTGTTCATAATTAGTGCGATATTGTGCAGATTCAGGAG
GGGACTGCTGGATGGCACAAAGTGGCGAATGAAGCAGCCAGGACTATTCCGGGAAGGGAG
AATGGCGGTAATTGTGACATAAAAAACTTAAGCAGAGGTTCCAAAGTTTATCTGCCAGTA
TTTGTCGAAGGAGCGAATCTTAGCACCGGTGATATGCACTTCTCCCAGGGCGATGGTGAA
GTTTCGTTTTGTGGAGCAATTGAAATGAGTGGATTCCTTGAGCTCAAGTAATAAACTTTC
TACTTGTTTACACTTCAATGTTACTTTTTATATTCCGACTTATAAACGTTACTGGACCTA
AGGATGGACCCAAACAATCACCTGCATCAAATCAGAATTTCAGATCCAACAGTGTAGTGA
ACCTCACATTACTATATATCACATCGATTTTTATAAAGATACTAGCACCAGTCATCTTCA
TAGCAGCTTGTATGGTATTTCTCAGATAACTCATGAAGAATATGAAAGCAAATTCATGGG
TTTTCTTAGATAGCTCATGGGATTTGCTATATCATGTTTCAAATGGTGTTGCATTAGTTG
ATGTTCTATTCTGTCATCACAACAATATAAACATACATCAATGGTTTCTAGTTTGTATAT
TGTGATGGTTGAGATACACTCACTGCATCAGTGACCAATTATTCCTGAACCACGCAGTTG
AATCAAATCAATGTTGCTGGACATGACGACTGTCAGCTGGACAAATAAAATCTGCCTATG
AAAATCCAATTTACCTTGCACATTTCTCAAACTCAACAGCATGTCCCCTCTGACATTGTG
TAACAGGTGCGAGATCATAAGAGGCGGGATGAAGGAATACTTGACCCCAGTTGGTCCGAC
ACCGCTACACGTGAACCCTATCTTTGAGATCGGTCCTGTCGAGCCACGCTTCTCGGAGTG
GCTAGTGTTTGAGGGCATAAGCGTGGATGAATCTGGGAAGCAGCATTTCCTTGATGCGTC
AGTTGCTTACAAGCGCGCAGTCCTGAACGCCATTGAGTACATTGCTAGATTTGGGTACTC
AAAGGAGCAGGTAGGCAGTAGGGTAACTGATGAGTGATGATTATCCTCCTCTAATTACCA
TATATGTTTGAATATTGCCTTAGCATTTGGGTGATATATACAGGTGTATCTCTTACTATC
ATGCTGTCCCTGTGAGGGTAGGATCTCTGGAATAGTTGACTCTCCTAATGCAGTGGCAAC
TATTGCCATCCCTACAGCAATATTTGATCAGGTTCGCCCTCAACAGACCAACACAATTTC
CTTTTGACTGTTGCATTTTATTTGTTGTTGTTCCTTATCAGATTATTAAATAATCATGTT
AGATCATGAGTTCATGACCCATTCCTTTGGTCTTATCTTTGATCTAAATATCTGAGGTGA
GCTGCTGATACTGTATGTTATATGGGGGAAAAAAGCTAGTGCCTGTGCTGTCAGTTAATT
GTGAGTTAGCTCTATGAATCACAGCATGCCAATGCTGATACTAATGGGATTAGCTTATGT
AATGGCAGAACAGCATGCATCAGGGCATTTGATATGAGCCAATTTACTTCATGCGGTGTG
AGCTGCGCTTGACCAATGGTTCAGTAAAAGTAGATTTATATTAGCTATCCATTTTGTTGA
AATTAGATTATGTGAGCAAGCCTGATCGCACTTGGCCAGTGATGTATCAGAGTTATTTCT
TATAAAGCAGTCTGTGACACGAGAGACTCAACAATCAGAAATAAAGTTTTCCCCTGAAAG
TTACGGTTAATAAGGTCAAACGATATGAGCAGCTTGTAAATGTTAATTCTAGAATTTTAC
ATTAAGCAGACACAATAGCCAGGGCGGATACATTATTTTCAGTAAGTACAGATCGAATCT
GCTTACTACTTTGCAACTAAACTTGGTTCATAAGCATTCTTTTACATGGATCTTTTTTTT
AAACTTCACTGCATAACGTCTCAATTGCTAGCACAGGATATAAAGCCAAAACACCTGAGA
GGAAGACCGGGACCAAAGTTGATAAGGCTTCCAGATCTCCTGAGCTGTTCAAACAATGGG
CATATTCCTGTCACCCAAGACCAAAGTGGTACAAGGGCGTCCTAGGGGCGTATATGATCT
GGAAGCTGATGCCGTATCCTTCTACTTATACACACAAATAATCGTGTTGGTGTTTCCAAC
AATGTATGAGGATAGAGACACCTGAGTGGTGCCATATTTTCAGTGCCTGTATTGCTACAA
AGTTGTTCATTAATTTCACTCTATAGAAAATTTCTTATTTGGGGTCGAGTATGTAACTAG
CAGTGAAGTGAGGATGAGATAATATGAAAGAACCAGGCAGCTGGTAGTGGCTGGAGCGAA
GTTGCAGTTGTGACAGATTCACTCTACCTGCACACAAGAAACCAACACACACTGTTGATC
CAGTTCTAGCATACTATAGACAGATGCTGGTTGGATTCATGAAATAGCCTCCGGAGCTGA
AGGAAGTCCTAAAGAGGGTGAAGAAATGAGTTTGACAAACGATGCTGGTTGTAGCCTTAG
GGTGATGTTAGAGGACCATATATGAGCGGTGGATATTTGATGGAATGGGCATTGTGGAGT
TGTGGTTCAGTCAATCTGTACCATTGTCAATTGCCCTTCCTTCACTACCAGCCAGATCAC
CAATGTTTGGAAGCT