Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012666_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:8:178294352:178298974:-1 gene:Zm00001d012666 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable xyloglucan glycosyltransferase 12
Sequence

ATGCCGCAGTGGTGGGGCCGGGAGGCGCGGGGTGGCGGCGGCGGCGGCGGCACGTCGGTG
GTGGTGAAGATGGAGAGCCCGGACTGGGCCGTCCGGGAGCCAGAGGCGGCGAGGGGGAAG
GCCGGCCGCGGCAAGAACGCTCGCCAGATCACGTGGGTGCTTCTGCTCAAGGCGCACCGC
GCCGCGGGGAAGCTCACGGGCGCCGCCTCCGCCGCGCTGTCCGTCGCCGCGGCCGCGCGG
AGGCGGGTGGCGGCGGGGCGGACCGACGCCGACGCCGACGCCGGCGCCGGCGCCGGCGCC
GCGCCGCACGGGGAGAGCCCCGCACTGCGCACCAGGCTCTACGGCTTCCTCCGCGCCTCT
CTCGTCCTCTCCATGCTCCTCCTCGCCGCCGACGTCGCCGCGCACCTCCAGGGCTGGCAC
CTCCTCGCCGTCGACGTCCCCGACCTGCTCGCCGTCGAGGGTCTCTTCGCCGCCGGGTAC
GCGTCCTGGGTGCGCGTCCGCCTCCAGTACCTCGCGCCGGCGCTGCAGTTCCTGGCGAAC
GCGTGCGTCCTGCTCTTCTTGGTCCAGAGCGCCGACCGCCTTATCCTCTGCCTCGGCTGC
CTCTGGATCAAGCTCAGGGGCATCAAGCCAGTTCCCAATGCTGCTGGCAAAGGGCCAGAC
GACGTCGAGGCCGGCACCGGGGAGTTCCCCATGGTGCTCGTGCAGATTCCGATGTGCAAC
GAGAAGGAGGTGTACCAGCAATCTATTGGTGCTGTTTGCGGTCTGGACTGGCCACGGCCC
AACTTCTTGGTGCAGGTGCTAGACGACTCTGATGATGCTGCCACTTCAGCGCTTATTAAA
GAGGAGGTGGAGAGGTGGCAACGTGAAGGCGTTCGCATATTGTACCGACACCGGGTAATT
CGTGATGGCTACAAGGCTGGAAATCTCAAGTCAGCCATGAACTGCAGCTATGTGAAAGAT
TATGAGTTTGTTGTTATCTTTGACGCTGATTTTCAACCCCAGCCAGACTTCCTGAAGCGA
ACTGTGCCCCATTTCAAGGGAAATGAGGATGTTGGGCTAGTTCAGGCAAGGTGGTCTTTT
GTGAACAAGGATGAGAACTTGTTAACTAGGCTGCAAAACATAAACCTGTGCTTCCACTTT
GAGGTGGAGCAGCAGGTTAATGGGATCTTCCTCAATTTCTTTGGATTCAACGGAACGGCT
GGAGTGTGGAGAATAAAGGCACTTGAGGATTCAGGTGGGTGGATGGAGAGGACAACAGTG
GAGGACATGGATATTGCTGTCCGAGCACACCTCAAGGGCTGGAAGTTTCTGTTCCTTAAC
GATGTTGAGTGCCAGTGTGAATTGCCAGAGTCATATGAGGCATATCGAAAACAGCAACAC
CGATGGCATTCTGGTCCAATGCAGTTATTTAGACTATGCTTTGTGGATATTATCAAATCG
AAGATTGGATTTTGGAAGAAGTTCAACCTCATATTCCTTTTCTTTCTCCTTCGCAAGCTT
ATTTTGCCCTTCTATTCCTTCACCCTTTTCTGTATCATTCTTCCCATGACAATGTTCATT
CCTGAAGCCGAGCTCCCTGCCTGGGTCGTGTGCTACATTCCGGCAACCATGTCCTTGCTG
AACATCCTCCCAGCCCCCAAATCGTTCCCGTTCATTGTCCCCTATCTCCTGTTTGAGAAT
ACCATGTCAGTAACCAAATTCAACGCCATGGTTTCTGGCCTGTTCCAGCTCGGGAGCGCC
TACGAGTGGGTTGTCACCAAGAAATCAGGCCGTTCTTCCGAGGGCGACCTCATCGCCCTT
GTCGAGAAGCAGCCTAAACAGCAAAGGGTAGGGTCTGCACCCAACCTTGAGTCACTTACA
AAGGAGTCTTCCAGTCTCAAAAGGGACTCCAAAAGGAAGAAACACAATAGGATATACAGG
AAGGAGCTGGCACTCTCCTTCCTTCTCCTAACAGCCGCTGCTCGGAGCCTGCTATCGGTG
CAAGGGATACATTTCTACTTCCTTCTGTTCCAAGGGGTGTCGTTCTTGGTTGTTGGGCTC
GATCTAATCGGTGAGCAAGTCGAGTGA

Peptide Sequence

PEP ID

Zm00001d012666_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:8:178294352:178298974:-1 gene:Zm00001d012666 transcript:Zm00001d012666_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable xyloglucan glycosyltransferase 12
Sequence

MPQWWGREARGGGGGGGTSVVVKMESPDWAVREPEAARGKAGRGKNARQITWVLLLKAHR
AAGKLTGAASAALSVAAAARRRVAAGRTDADADAGAGAGAAPHGESPALRTRLYGFLRAS
LVLSMLLLAADVAAHLQGWHLLAVDVPDLLAVEGLFAAGYASWVRVRLQYLAPALQFLAN
ACVLLFLVQSADRLILCLGCLWIKLRGIKPVPNAAGKGPDDVEAGTGEFPMVLVQIPMCN
EKEVYQQSIGAVCGLDWPRPNFLVQVLDDSDDAATSALIKEEVERWQREGVRILYRHRVI
RDGYKAGNLKSAMNCSYVKDYEFVVIFDADFQPQPDFLKRTVPHFKGNEDVGLVQARWSF
VNKDENLLTRLQNINLCFHFEVEQQVNGIFLNFFGFNGTAGVWRIKALEDSGGWMERTTV
EDMDIAVRAHLKGWKFLFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCFVDIIKS
KIGFWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSLL
NILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKSGRSSEGDLIAL
VEKQPKQQRVGSAPNLESLTKESSSLKRDSKRKKHNRIYRKELALSFLLLTAAARSLLSV
QGIHFYFLLFQGVSFLVVGLDLIGEQVE

Transcript Sequence

Transcript ID

Zm00001d012666_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:178294352:178298974:-1 gene:Zm00001d012666 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable xyloglucan glycosyltransferase 12
Sequence

TCCTCCTACCTCACCAGCATTTCCCTCCCTTGTCCCAGGCTCCCAGCTCGCATTAATCTT
TGGCCCCCCCCCCCTTCTCCTCCTTGTGTGAGCGTGTCTCCGTCGTTCGCCTCGGCGCTC
ACGGGTGGTCTCGTTGATGAGCTGAGGGAGGGGCTGTGCTCCGGGGGAGGGGGAAGCCAA
AGCCAAGAAGCGGCGCCGCCTAGGCTTGGGTTCCGCGGCGAGGTGCCAATGCCGCAGTGG
TGGGGCCGGGAGGCGCGGGGTGGCGGCGGCGGCGGCGGCACGTCGGTGGTGGTGAAGATG
GAGAGCCCGGACTGGGCCGTCCGGGAGCCAGAGGCGGCGAGGGGGAAGGCCGGCCGCGGC
AAGAACGCTCGCCAGATCACGTGGGTGCTTCTGCTCAAGGCGCACCGCGCCGCGGGGAAG
CTCACGGGCGCCGCCTCCGCCGCGCTGTCCGTCGCCGCGGCCGCGCGGAGGCGGGTGGCG
GCGGGGCGGACCGACGCCGACGCCGACGCCGGCGCCGGCGCCGGCGCCGCGCCGCACGGG
GAGAGCCCCGCACTGCGCACCAGGCTCTACGGCTTCCTCCGCGCCTCTCTCGTCCTCTCC
ATGCTCCTCCTCGCCGCCGACGTCGCCGCGCACCTCCAGGGCTGGCACCTCCTCGCCGTC
GACGTCCCCGACCTGCTCGCCGTCGAGGGTCTCTTCGCCGCCGGGTACGCGTCCTGGGTG
CGCGTCCGCCTCCAGTACCTCGCGCCGGCGCTGCAGTTCCTGGCGAACGCGTGCGTCCTG
CTCTTCTTGGTCCAGAGCGCCGACCGCCTTATCCTCTGCCTCGGCTGCCTCTGGATCAAG
CTCAGGGGCATCAAGCCAGTTCCCAATGCTGCTGGCAAAGGGCCAGACGACGTCGAGGCC
GGCACCGGGGAGTTCCCCATGGTGCTCGTGCAGATTCCGATGTGCAACGAGAAGGAGGTG
TACCAGCAATCTATTGGTGCTGTTTGCGGTCTGGACTGGCCACGGCCCAACTTCTTGGTG
CAGGTGCTAGACGACTCTGATGATGCTGCCACTTCAGCGCTTATTAAAGAGGAGGTGGAG
AGGTGGCAACGTGAAGGCGTTCGCATATTGTACCGACACCGGGTAATTCGTGATGGCTAC
AAGGCTGGAAATCTCAAGTCAGCCATGAACTGCAGCTATGTGAAAGATTATGAGTTTGTT
GTTATCTTTGACGCTGATTTTCAACCCCAGCCAGACTTCCTGAAGCGAACTGTGCCCCAT
TTCAAGGGAAATGAGGATGTTGGGCTAGTTCAGGCAAGGTGGTCTTTTGTGAACAAGGAT
GAGAACTTGTTAACTAGGCTGCAAAACATAAACCTGTGCTTCCACTTTGAGGTGGAGCAG
CAGGTTAATGGGATCTTCCTCAATTTCTTTGGATTCAACGGAACGGCTGGAGTGTGGAGA
ATAAAGGCACTTGAGGATTCAGGTGGGTGGATGGAGAGGACAACAGTGGAGGACATGGAT
ATTGCTGTCCGAGCACACCTCAAGGGCTGGAAGTTTCTGTTCCTTAACGATGTTGAGTGC
CAGTGTGAATTGCCAGAGTCATATGAGGCATATCGAAAACAGCAACACCGATGGCATTCT
GGTCCAATGCAGTTATTTAGACTATGCTTTGTGGATATTATCAAATCGAAGATTGGATTT
TGGAAGAAGTTCAACCTCATATTCCTTTTCTTTCTCCTTCGCAAGCTTATTTTGCCCTTC
TATTCCTTCACCCTTTTCTGTATCATTCTTCCCATGACAATGTTCATTCCTGAAGCCGAG
CTCCCTGCCTGGGTCGTGTGCTACATTCCGGCAACCATGTCCTTGCTGAACATCCTCCCA
GCCCCCAAATCGTTCCCGTTCATTGTCCCCTATCTCCTGTTTGAGAATACCATGTCAGTA
ACCAAATTCAACGCCATGGTTTCTGGCCTGTTCCAGCTCGGGAGCGCCTACGAGTGGGTT
GTCACCAAGAAATCAGGCCGTTCTTCCGAGGGCGACCTCATCGCCCTTGTCGAGAAGCAG
CCTAAACAGCAAAGGGTAGGGTCTGCACCCAACCTTGAGTCACTTACAAAGGAGTCTTCC
AGTCTCAAAAGGGACTCCAAAAGGAAGAAACACAATAGGATATACAGGAAGGAGCTGGCA
CTCTCCTTCCTTCTCCTAACAGCCGCTGCTCGGAGCCTGCTATCGGTGCAAGGGATACAT
TTCTACTTCCTTCTGTTCCAAGGGGTGTCGTTCTTGGTTGTTGGGCTCGATCTAATCGGT
GAGCAAGTCGAGTGATGCGGTACAAGGGAGAGTAATTGGGTATCTATTTTGCTGCGAGTG
GGGGGCAATGCGACCAAAAGAGGCACTTCAGGTAAAGGCAAGCGTGGTACATGATCCAAA
GAAGATTTGATTCCGGATTAAGAAGGGTTATATAGTTTCATCGGGGATACTTGAAACGGT
GAAAATGTGGAATTGTGGATTGTAGATATAATATGGCTTGGGACTGTGGGCTGTAAAAGG
CTTGGGGGTTCTAATTCTTTTGTAAGAAAAATCATCAGTGGTTAGATGGGTTATTTTGCT
TACTTGACAGTTTACCTTCAAAGGGGGATACTGTTGGGATCCATGTGATTTGGGCAATTG
CTACGAATGGATACTGAATTACTGAGACCGATTTGTTCTTTTCT