Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012656_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:8:178058044:178061770:-1 gene:Zm00001d012656 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoyl synthase 1%2C chloroplastic

Sequence

ATGCAGAGCTCCCTCGCGCGGCCGCTGCGGCCTCCGGTACTGGCCGGACGCGGCGGTAGA
CGGGGCCTGGTAGCCGTGGCACGGTGCCACGCTGAGGCGGCGCCACCGGTGGGGACGGCG
TCTAGGGCGCCCGCGGGGCCGTACACCGGGAGGGATCCGGAGGTGAAGAAGCCCGCTTGG
CTGCGGCAGCGCGCTGCGCAGGGCGAGAAGTACGCTCGCCTGCGGGAGTCCATCGGCGAG
CTCAAGCTCAACACCGTCTGCGTCGAGGCACAGTGCCCCAACATCGGCGAGTGTTGGAAC
GGAGGTGGAGGGGCCGGCGGCGAAGGGGACGGCATCGCCACGGCCACCATCATGGTGCTT
GGTGACACCTGCACGCGCGGGTGTCGATTCTGCGCTGTGAAGACCAGCAACAAGCCACCG
CCGCCGGATCCCCTGGAGCCTCTAAACACGGCTTTGGCTGTTGCAAGCTGGGGAGTAGAT
TATGTCGTGCTAACCAGTGTCGATAGAGATGACTTACCTGATGGTGGAAGTAGCCATTTT
GCTCAAACAGTGAAAGCTTTAAAGGAGCTCAAACCTGGAATACTGGTGGAGTGCTTAACC
TCAGATTTTCGAGGTGACCTGGAGGCCATCTCATCTTTGGCTAACTCTGGCCTAGATGTT
TATGCGCACAACATTGAAACTGTGAGGAGTCTGCAGAGGATTGTGAGGGATCCCCGGGCA
GGGTATGATCAGAGCTTGGCAGTTCTCAAGCATGCAAAAGCTTGCAGGGAGGGCATGGTT
ACAAAGTCTTCTATCATGCTTGGTCTTGGAGAGACTGATGAAGAGGTGAAACAAGCCATG
ATGGATCTGCGGGCAATCGGTGTTGACATCCTTACTTTGGGCCAGTACTTGCAGCCAACA
GAAAGACATCTAACAGTAAGAGAGTATGTGACTCCTGAAAAGTTCCAGTTTTGGAAGGAG
TATGGGGAATCGGTCGGTTTCCGATATGTTGCTAGCGGACCCTTGGTAAGTGTTACATGC
AGCTGA

Peptide Sequence

PEP ID

Zm00001d012656_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:8:178058044:178061770:-1 gene:Zm00001d012656 transcript:Zm00001d012656_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoyl synthase 1%2C chloroplastic

Sequence

MQSSLARPLRPPVLAGRGGRRGLVAVARCHAEAAPPVGTASRAPAGPYTGRDPEVKKPAW
LRQRAAQGEKYARLRESIGELKLNTVCVEAQCPNIGECWNGGGGAGGEGDGIATATIMVL
GDTCTRGCRFCAVKTSNKPPPPDPLEPLNTALAVASWGVDYVVLTSVDRDDLPDGGSSHF
AQTVKALKELKPGILVECLTSDFRGDLEAISSLANSGLDVYAHNIETVRSLQRIVRDPRA
GYDQSLAVLKHAKACREGMVTKSSIMLGLGETDEEVKQAMMDLRAIGVDILTLGQYLQPT
ERHLTVREYVTPEKFQFWKEYGESVGFRYVASGPLVSVTCS

Transcript Sequence

Transcript ID

Zm00001d012656_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:178058044:178061770:-1 gene:Zm00001d012656 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoyl synthase 1%2C chloroplastic

Sequence

TCGACCCCCTGTTCTACTACACAAGGGGTGAAACGGGAACGCTTACCCGTCCTCCCCGCC
TGGAACCCATCGCCTCCACTGTGCCCGACGCCGCGCCCGATTCCACCGGCCGACAACGAT
GCAGAGCTCCCTCGCGCGGCCGCTGCGGCCTCCGGTACTGGCCGGACGCGGCGGTAGACG
GGGCCTGGTAGCCGTGGCACGGTGCCACGCTGAGGCGGCGCCACCGGTGGGGACGGCGTC
TAGGGCGCCCGCGGGGCCGTACACCGGGAGGGATCCGGAGGTGAAGAAGCCCGCTTGGCT
GCGGCAGCGCGCTGCGCAGGGCGAGAAGTACGCTCGCCTGCGGGAGTCCATCGGCGAGCT
CAAGCTCAACACCGTCTGCGTCGAGGCACAGTGCCCCAACATCGGCGAGTGTTGGAACGG
AGGTGGAGGGGCCGGCGGCGAAGGGGACGGCATCGCCACGGCCACCATCATGGTGCTTGG
TGACACCTGCACGCGCGGGTGTCGATTCTGCGCTGTGAAGACCAGCAACAAGCCACCGCC
GCCGGATCCCCTGGAGCCTCTAAACACGGCTTTGGCTGTTGCAAGCTGGGGAGTAGATTA
TGTCGTGCTAACCAGTGTCGATAGAGATGACTTACCTGATGGTGGAAGTAGCCATTTTGC
TCAAACAGTGAAAGCTTTAAAGGAGCTCAAACCTGGAATACTGGTGGAGTGCTTAACCTC
AGATTTTCGAGGTGACCTGGAGGCCATCTCATCTTTGGCTAACTCTGGCCTAGATGTTTA
TGCGCACAACATTGAAACTGTGAGGAGTCTGCAGAGGATTGTGAGGGATCCCCGGGCAGG
GTATGATCAGAGCTTGGCAGTTCTCAAGCATGCAAAAGCTTGCAGGGAGGGCATGGTTAC
AAAGTCTTCTATCATGCTTGGTCTTGGAGAGACTGATGAAGAGGTGAAACAAGCCATGAT
GGATCTGCGGGCAATCGGTGTTGACATCCTTACTTTGGGCCAGTACTTGCAGCCAACAGA
AAGACATCTAACAGTAAGAGAGTATGTGACTCCTGAAAAGTTCCAGTTTTGGAAGGAGTA
TGGGGAATCGGTCGGTTTCCGATATGTTGCTAGCGGACCCTTGGTAAGTGTTACATGCAG
CTGATTACTCCCTCCAGTTTTACCCTCTAAATGGTAAATACCAAAACAAACTAATATGCC
ACCACTCTGAAATAAGCACTACAATGTATATAGCTAATGTACCACACATCATGAGCACAT
TGTATCCGTAGTACGTTGAGAGCAGCAAAACAAGAGTAGAACAGCATAAACATCTGGATC
CTCCGAAAGCTGAGACACAGCTCTTTTTTTCCTTTTCTTTTCGGATAGTATGCACAGATT
TGCTCTCTGC