Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012643_T023
CDS Infomation	cds chromosome:B73_RefGen_v4:8:177712444:177732810:-1 gene:Zm00001d012643 gene_biotype:protein_coding transcript_biotype:protein_coding description:ER degradation-enhancing alpha-mannosidase-like 1
Sequence	ATGCAGCCGATCCGGCGGCGGCACCGAGGCTTTGCACTCCTCTGTCTCTCCGCCGCCCTC CTCGCTGCCGCCACTCTGCTCCCCGGCGCCGCCGTCGCCGAAGGTGTCACGCCCTCCGAG GCGCGCCGGCTCCGCGACGAGGTGAAAGATATGTTCTATCATGCGTTTGATGGATACATG AAGTATGCTTTCCCACTCGATGAGCTGCGGCCCTTAAGTTGCCAAGGTGAAGACTCCCTT GGTGGTTATGCGCTCACTCTTATCGATTCTTTGGATACCTTGGCTTTACTGGGTGATAAG GAGAAATTTGGTGCTGCTGTGGAGTGGGTTGGTAAGAATGTCCACTTTGATATTAATAAA ACCGTCTCTGTTTTTGAAACCAACATACGTATCCTTGGGGGTCTGCTATCAGCTCACCTG ATTGCCAGTGATTATGCCACTGGTATGAGAATCCAATCTTATGATGACCAGTTACTTCAT TTAGCTGCTGACTTAGCTCAGAGGTTGTTGCCCGCATTTGACACTCCTACAGGTATTCCA TTTGGATCTGTTAATTTATTGTACGGAGTCGATGAAAATGAAAGCAAGATAACATCAACG GCTGGTGGTGGTACTTTGACACTGGAATTTGGCATATTGAGTCGCTTGACTAATAATACT GTTTTTGAGCGAGTTACAAAAAAATCAGTGCGTGGAATATGGTCACGCAGATCAAAACTC AATCTTGTTGGTGCCCATATAAATGTCTTTACTGGTGAATGGACACAGAAGGATGCAGGA ATTGGCACAAGCATTGATTCATTCTATGAATATCTTCTAAAGGCATATTTATTGTTTGGA GATGAAGAATACCTGTACATTTTTCAGGAGGCTTACAAAGCTGCCATGCACTATCTCCAT CATGATCCTTGGTACGTGGAGGTTAATATGAACTCTGGTGCTACTGTTTGGCCACTCTTC AATAGTCTGCAGGCATTCTGGCCAGGGCTTCAGGTTTGGTTACACATATTTCTGATAATT GATGTGGCTTTGTCGCACATATTCTAG

Peptide Sequence

PEP ID	Zm00001d012643_P023
PEP Infomation	pep chromosome:B73_RefGen_v4:8:177712444:177732810:-1 gene:Zm00001d012643 transcript:Zm00001d012643_T023 gene_biotype:protein_coding transcript_biotype:protein_coding description:ER degradation-enhancing alpha-mannosidase-like 1
Sequence	MQPIRRRHRGFALLCLSAALLAAATLLPGAAVAEGVTPSEARRLRDEVKDMFYHAFDGYM KYAFPLDELRPLSCQGEDSLGGYALTLIDSLDTLALLGDKEKFGAAVEWVGKNVHFDINK TVSVFETNIRILGGLLSAHLIASDYATGMRIQSYDDQLLHLAADLAQRLLPAFDTPTGIP FGSVNLLYGVDENESKITSTAGGGTLTLEFGILSRLTNNTVFERVTKKSVRGIWSRRSKL NLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLYIFQEAYKAAMHYLH HDPWYVEVNMNSGATVWPLFNSLQAFWPGLQVWLHIFLIIDVALSHIF

Transcript Sequence

Transcript ID	Zm00001d012643_T023
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:177712444:177732810:-1 gene:Zm00001d012643 gene_biotype:protein_coding transcript_biotype:protein_coding description:ER degradation-enhancing alpha-mannosidase-like 1
Sequence	ACTGGCCTCGGGCCCGCCCGTCGTGAGGTCCGAGCTCGATGCAGCCGATCCGGCGGCGGC ACCGAGGCTTTGCACTCCTCTGTCTCTCCGCCGCCCTCCTCGCTGCCGCCACTCTGCTCC CCGGCGCCGCCGTCGCCGAAGGTGTCACGCCCTCCGAGGCGCGCCGGCTCCGCGACGAGG TGAAAGATATGTTCTATCATGCGTTTGATGGATACATGAAGTATGCTTTCCCACTCGATG AGCTGCGGCCCTTAAGTTGCCAAGGTGAAGACTCCCTTGGTGGTTATGCGCTCACTCTTA TCGATTCTTTGGATACCTTGGCTTTACTGGGTGATAAGGAGAAATTTGGTGCTGCTGTGG AGTGGGTTGGTAAGAATGTCCACTTTGATATTAATAAAACCGTCTCTGTTTTTGAAACCA ACATACGTATCCTTGGGGGTCTGCTATCAGCTCACCTGATTGCCAGTGATTATGCCACTG GTATGAGAATCCAATCTTATGATGACCAGTTACTTCATTTAGCTGCTGACTTAGCTCAGA GGTTGTTGCCCGCATTTGACACTCCTACAGGTATTCCATTTGGATCTGTTAATTTATTGT ACGGAGTCGATGAAAATGAAAGCAAGATAACATCAACGGCTGGTGGTGGTACTTTGACAC TGGAATTTGGCATATTGAGTCGCTTGACTAATAATACTGTTTTTGAGCGAGTTACAAAAA AATCAGTGCGTGGAATATGGTCACGCAGATCAAAACTCAATCTTGTTGGTGCCCATATAA ATGTCTTTACTGGTGAATGGACACAGAAGGATGCAGGAATTGGCACAAGCATTGATTCAT TCTATGAATATCTTCTAAAGGCATATTTATTGTTTGGAGATGAAGAATACCTGTACATTT TTCAGGAGGCTTACAAAGCTGCCATGCACTATCTCCATCATGATCCTTGGTACGTGGAGG TTAATATGAACTCTGGTGCTACTGTTTGGCCACTCTTCAATAGTCTGCAGGCATTCTGGC CAGGGCTTCAGGTTTGGTTACACATATTTCTGATAATTGATGTGGCTTTGTCGCACATAT TCTAGATGATTGCTTATGCTGCTTAGATTTAAGGTTTTAGCTGGAGATGTTGATCCTGCT ATTCGCACACATGCTGCCTTCTTCAGCGTCTGGAAAAAGTATGGTTTTACCCCTGAAGGT TTTAATCTTGCTACATCCACTGTACAGAATGGACAAAGGAGCTACCCGCTACGACCAGAG TTGATTGAAAGCACATATTGGTTGTTCAAGGCTACCAGAGATTACAGATACCTTGATGTT GGAAGGGACATATTAGCAAGCCTTCAATATGGTGCCAGATGCCCTTGTGGTTACTGCCAC ATATCAGATGTGGAAACCCACAAGCAGGATGATCACATGGAGAGTTTTTTCCTTGCAGAA ACGGTCAAGTATCTCTGGCTTCTTTTTGATTTAGCTGCTGGCCCTGACAATATTGTTGAA AATGGACCATATAAGTACATATTTAGTACAGAGGGCCATTTGTTACCTGTTACTCCTGAG ATAGCCTTGGAAGATGAACATTGTTCATATTTTGGAGCATTCTGTAATGGCGGTGCCGAC CATGGATATGGTGCTAGTGCTAGTTCTACTAAGCATCGAAATGGAAACTATACCCAATTA GATGATATTCAAACCCCTTCCAGTCACTATTCAATGTCCAATGTGTTGTTTACGCCAGGT TACATCAAGGGAGTTTGTCCAGGATTGACTCATGCGCAGAAATTTGGGATATCATACTCT GATGAAGAGGATAACTTTATAGAGCAGACTTCTGAGAGTCTTGATCATCATGGTGAATCT GCCATAGAATCTAGCGTCCAAGACCAATCAAGTTCTATTATATTGATCTCTCACCCAGTC GCAAGCCAACAGGATGAGGCTTTTGAGAGCGAGTCTGGAAGTCAAGATCATGCAAATATT GTTGTAACTTCTGATTCTGATTCTGATTCCACAAGCCGTGATAATACTGTTGGCTCTCCC GGAATGAACTCGGAAGAACTTATGGACGACATATAGGGCACCTCTAGACAGGACAAAAGA TGAAGAGGTTGCTCACAGTGTTGAGTCCAAGATATCAGCTGACCCTTTGCTCATGTAGCA ACCCATTTCTGTGGAATCTTCAGGGTCAATGGCTTGCCGAATGCAGAACAAGTTAGCAAG CAAGCAAAATGTCTGGTAGACGATTCCAGTATCTTGCCAGCTTCAACATCGGAAATTGAT ATTTACTTTCAGATAGAATATATTACAGGGCGTACATTCACTAATTTGTTCTTTTTTTTC TGTATCGATCACTAATAGATATTATTTTGATTAAT