Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012634_T022
CDS Infomation

cds chromosome:B73_RefGen_v4:8:177539140:177544542:-1 gene:Zm00001d012634 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vps51/Vps67 family (components of vesicular transport) protein
Sequence

ATGCCTGCGGTGCCCGTTCCCGGAGGCGGTGGCTCCTCCGACGCCGAGGAGCTGTTCCGC
ACCAAGCGCATCCCGGAGATTCGCGCGGTTGAGGGCGCCACCCGACGCGAGATCTCCGCC
AAGGAGGAGGAGCTCCGGCAGCTCGTCGGGCGCAGCTACCGCGACCTGCTCGACTCAGCG
GACTCCATACTCCTCATCAAGCAGTCCTCCGATGCAATATTCTACAACCTCGCCCGCATC
TCCGACTCCTTGTCGTCGCTCTCGCCTCCCCCTGAACCCTCTCTCGCCGTAAGCGCCGTA
TCGCCGTCTCCGTCAGCTGGAGGGCGCGCGAGGCTCTACGCGCTGGCCGCGCGCGCCAAG
TACCTGGTTGACACACCGGAGCACATCTGGGGCCGGCTCGACGAGGGCCTGCTCCTGGAG
GCGGCGGGGCGGTACCTGCGGGCTCAGGTCGTGTACGGGCGACTCTCCCGCGACGCCGCT
GCCGCCGCGCGGTTCCCACTCCTCGCGCACCAGGCGCAGCTCGTGGAGGCGTTCCGGCCG
CAGATCGCCCAGCGAGCGCGCGAGCGCCTCGCTGACCGCCGCCTCCCTGTAGCGGCCCAC
GCTGACGCGCTTGCGGCCGTGGCCGCGATCGACGCGCCATCGCTTGCCCCTGCTCCGGCG
CTCCTTCTCTTCCTCACCTCGCGCCGCGCTTGGATCTCCCAAGACCTAGCTGGTCTCGCC
TCGGATCTGTCATCCTACACCTCTGTGCTGTGCGATATAGCGAGGATCGTGCGGATCACG
CTTGGCCACGTTGGACAGTTGTTTGTGCCTGCACTCAGTGATATGCCGTTGTTCTTCAAG
ACGGTGACTGAGAAGACGCCGCCTGAGCAGTTGTTCGGTGGCATTCCGGACCCTGATGAT
GAAGCACGGTTGTGGAAGGAGCACATGAACCAGCTTGAAGCTATAATGGTGCTGCTTAAG
CCAGATGTTGTTGCAGCGGCCTGTACGGATTGGCTCAAGGAATGTTGCAGTGAAATTTTT
GGTGTGATTGCTGGTGAGCAAAAGTTGGTTGATGCCATTGGGAGTGGGGAGCTGCTTGGA
TCAGTGCAAAGACTTGTACGTGATGCCCTAGATGGGAGAGATGGATTGGAGAGAAGTTTG
GAGCAGTGGCTGAAAAGTGTCTTTGGGTCAGATACTGAGTCGCCATGGGATCAGATCCGT
GGGTTGATCTTGAAGGACGACAAGGATATTTTCGAGGATTGGATGGAGGAAGCATTTGTG
CGACGGATGAAGGACATCGTGCATTCAGAGTTTGATATATTGGGTTCTAGTGTTAACGTG
AAGGAATCAATTCATGCTATCGGTGCCAATGCTGATCCAAAGGATGCTGGAGATTTCCTT
GCATACCTGCGGAAATCTTCAAAGGGTGGTGGTTTCTGGTTCTCAGAGTCTAAGATCAAG
AAAGGTGGAGTTTTGGCACACTTGAAACCAATTGCTGATGAAAATGATTTCCGTAGCTGC
CTAACATCGTATTTTGGGCCAGAAGTTAGTCGGATCAGGAGTGCAATTGACAGTAAATGC
AAGAATATCCTGGAGGATCTGCTAAGCTTTGTGGAGTCACATAATTCAACCACAAGGCTG
AAGGAATTGGTGCCATACCTTCAGGAGAAATGCTACAAGACCATCTCGGGAGTACTGAAA
GAATTAGAAGCTGAGCTCAGAAAGCTCTCTGCTTTGTTGGGAACCAAAAAGGAGGGTAAC
GACATACCTGCAGCTTCTATTATAGCGGAGAGGTCTCTCTTCATTGGTCGTCTCTTGTTT
GCGCTGAGATACCATTCAAGTCATGTACCCCTGATACTAGGTTCCCCAAGGGAGTGGGTA
AAGGAGGTTGGTGGTGCAGCATTTGCCAGGTTATCATCACCTACAGCAAGACATTTAAGG
GCATCTTTTACACCCAGAAGGCACACATTTGACAGTCCCAAGAGTCCTGGAAGGCAATTC
TCCGATAGCCCCAGAAGACAAACTATTGCTGCTGCAGTATCTTTGTTTGGAGCTAATGAT
AGATCTAATCCTAGACTTGATGAACTCAATAAGACCCTGCAGTCACTTTGCATCATGGCT
CATAATGTATGGATAGCATGGGTGTCCACTGAATTATCTCACATTCTTTCATATGATCTC
AATAAAGACGATTCACTATCCTCTGCAACTCCTTTGAGGGGCTGGGAAGTCACAGTAATT
AAACAAGAGGAAACAACTGAGGGTCCCTTGGAAATGCAAATAGCTCTTCCATCGATGCCT
TCATTGTACATCATATCCTTTCTTTATCAAGCATGTTTGGAGATTCATAAGGTTGGAGGG
CACATCCTGGACAGGATTATTTTGCATAATTTTGCTTGGGAGCTACTGCAGAAGGTCATC
AATATTTATGAAAATTTTCTTTCATCTGTTGAATCTGGGAATTCTCCGGTTTCAGAGAAA
GGAATTCTGCAAATACTGCTAGACTTGCGTTTTATTGGTGATGTCCTATCAGGAGGTACA
AGTTCTTCCACAAACACTACTGAAATGCAGACAAAACAGGATTCTTTGCCAAGCACCATC
TCCAAGACTTCCTTCAGGAGAAAACAGTCACAATTACATGCAGACTCAGCTGTCATAGAG
CCTATAAACAAGTTAGTCAACAGGCTCTCGCAAATACTGGATCCTATAGACTGGGCCACG
TATGAACCTTACCTGTGGGAGAATGAGAAGCAATCTTACAAGCGTCATGTTGTTCTTTTT
GGTTTTTTGGTCCAACTGAATCACATGTACACTGGTACTATGCAAAAATTACCAACAAAA
TCAAATACAGATTCAAATATCATGAGATGCTCTCAGGTTCCAAGATTCAAGTACCTACCA
ATCAGGTAA

Peptide Sequence

PEP ID

Zm00001d012634_P022
PEP Infomation

pep chromosome:B73_RefGen_v4:8:177539140:177544542:-1 gene:Zm00001d012634 transcript:Zm00001d012634_T022 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vps51/Vps67 family (components of vesicular transport) protein
Sequence

MPAVPVPGGGGSSDAEELFRTKRIPEIRAVEGATRREISAKEEELRQLVGRSYRDLLDSA
DSILLIKQSSDAIFYNLARISDSLSSLSPPPEPSLAVSAVSPSPSAGGRARLYALAARAK
YLVDTPEHIWGRLDEGLLLEAAGRYLRAQVVYGRLSRDAAAAARFPLLAHQAQLVEAFRP
QIAQRARERLADRRLPVAAHADALAAVAAIDAPSLAPAPALLLFLTSRRAWISQDLAGLA
SDLSSYTSVLCDIARIVRITLGHVGQLFVPALSDMPLFFKTVTEKTPPEQLFGGIPDPDD
EARLWKEHMNQLEAIMVLLKPDVVAAACTDWLKECCSEIFGVIAGEQKLVDAIGSGELLG
SVQRLVRDALDGRDGLERSLEQWLKSVFGSDTESPWDQIRGLILKDDKDIFEDWMEEAFV
RRMKDIVHSEFDILGSSVNVKESIHAIGANADPKDAGDFLAYLRKSSKGGGFWFSESKIK
KGGVLAHLKPIADENDFRSCLTSYFGPEVSRIRSAIDSKCKNILEDLLSFVESHNSTTRL
KELVPYLQEKCYKTISGVLKELEAELRKLSALLGTKKEGNDIPAASIIAERSLFIGRLLF
ALRYHSSHVPLILGSPREWVKEVGGAAFARLSSPTARHLRASFTPRRHTFDSPKSPGRQF
SDSPRRQTIAAAVSLFGANDRSNPRLDELNKTLQSLCIMAHNVWIAWVSTELSHILSYDL
NKDDSLSSATPLRGWEVTVIKQEETTEGPLEMQIALPSMPSLYIISFLYQACLEIHKVGG
HILDRIILHNFAWELLQKVINIYENFLSSVESGNSPVSEKGILQILLDLRFIGDVLSGGT
SSSTNTTEMQTKQDSLPSTISKTSFRRKQSQLHADSAVIEPINKLVNRLSQILDPIDWAT
YEPYLWENEKQSYKRHVVLFGFLVQLNHMYTGTMQKLPTKSNTDSNIMRCSQVPRFKYLP
IR

Transcript Sequence

Transcript ID

Zm00001d012634_T022
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:177539140:177544542:-1 gene:Zm00001d012634 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vps51/Vps67 family (components of vesicular transport) protein
Sequence

AACTCAAAGTAACGTGCCGTTTCACTAGTCACCCTCACCCCTTCCTCCCGATCCTCTCTC
GGATCTCGCCGCGCGCTGCCGCGCTCGAAGGTGAGCGGGGCCGCGATGCCTGCGGTGCCC
GTTCCCGGAGGCGGTGGCTCCTCCGACGCCGAGGAGCTGTTCCGCACCAAGCGCATCCCG
GAGATTCGCGCGGTTGAGGGCGCCACCCGACGCGAGATCTCCGCCAAGGAGGAGGAGCTC
CGGCAGCTCGTCGGGCGCAGCTACCGCGACCTGCTCGACTCAGCGGACTCCATACTCCTC
ATCAAGCAGTCCTCCGATGCAATATTCTACAACCTCGCCCGCATCTCCGACTCCTTGTCG
TCGCTCTCGCCTCCCCCTGAACCCTCTCTCGCCGTAAGCGCCGTATCGCCGTCTCCGTCA
GCTGGAGGGCGCGCGAGGCTCTACGCGCTGGCCGCGCGCGCCAAGTACCTGGTTGACACA
CCGGAGCACATCTGGGGCCGGCTCGACGAGGGCCTGCTCCTGGAGGCGGCGGGGCGGTAC
CTGCGGGCTCAGGTCGTGTACGGGCGACTCTCCCGCGACGCCGCTGCCGCCGCGCGGTTC
CCACTCCTCGCGCACCAGGCGCAGCTCGTGGAGGCGTTCCGGCCGCAGATCGCCCAGCGA
GCGCGCGAGCGCCTCGCTGACCGCCGCCTCCCTGTAGCGGCCCACGCTGACGCGCTTGCG
GCCGTGGCCGCGATCGACGCGCCATCGCTTGCCCCTGCTCCGGCGCTCCTTCTCTTCCTC
ACCTCGCGCCGCGCTTGGATCTCCCAAGACCTAGCTGGTCTCGCCTCGGATCTGTCATCC
TACACCTCTGTGCTGTGCGATATAGCGAGGATCGTGCGGATCACGCTTGGCCACGTTGGA
CAGTTGTTTGTGCCTGCACTCAGTGATATGCCGTTGTTCTTCAAGACGGTGACTGAGAAG
ACGCCGCCTGAGCAGTTGTTCGGTGGCATTCCGGACCCTGATGATGAAGCACGGTTGTGG
AAGGAGCACATGAACCAGCTTGAAGCTATAATGGTGCTGCTTAAGCCAGATGTTGTTGCA
GCGGCCTGTACGGATTGGCTCAAGGAATGTTGCAGTGAAATTTTTGGTGTGATTGCTGGT
GAGCAAAAGTTGGTTGATGCCATTGGGAGTGGGGAGCTGCTTGGATCAGTGCAAAGACTT
GTACGTGATGCCCTAGATGGGAGAGATGGATTGGAGAGAAGTTTGGAGCAGTGGCTGAAA
AGTGTCTTTGGGTCAGATACTGAGTCGCCATGGGATCAGATCCGTGGGTTGATCTTGAAG
GACGACAAGGATATTTTCGAGGATTGGATGGAGGAAGCATTTGTGCGACGGATGAAGGAC
ATCGTGCATTCAGAGTTTGATATATTGGGTTCTAGTGTTAACGTGAAGGAATCAATTCAT
GCTATCGGTGCCAATGCTGATCCAAAGGATGCTGGAGATTTCCTTGCATACCTGCGGAAA
TCTTCAAAGGGTGGTGGTTTCTGGTTCTCAGAGTCTAAGATCAAGAAAGGTGGAGTTTTG
GCACACTTGAAACCAATTGCTGATGAAAATGATTTCCGTAGCTGCCTAACATCGTATTTT
GGGCCAGAAGTTAGTCGGATCAGGAGTGCAATTGACAGTAAATGCAAGAATATCCTGGAG
GATCTGCTAAGCTTTGTGGAGTCACATAATTCAACCACAAGGCTGAAGGAATTGGTGCCA
TACCTTCAGGAGAAATGCTACAAGACCATCTCGGGAGTACTGAAAGAATTAGAAGCTGAG
CTCAGAAAGCTCTCTGCTTTGTTGGGAACCAAAAAGGAGGGTAACGACATACCTGCAGCT
TCTATTATAGCGGAGAGGTCTCTCTTCATTGGTCGTCTCTTGTTTGCGCTGAGATACCAT
TCAAGTCATGTACCCCTGATACTAGGTTCCCCAAGGGAGTGGGTAAAGGAGGTTGGTGGT
GCAGCATTTGCCAGGTTATCATCACCTACAGCAAGACATTTAAGGGCATCTTTTACACCC
AGAAGGCACACATTTGACAGTCCCAAGAGTCCTGGAAGGCAATTCTCCGATAGCCCCAGA
AGACAAACTATTGCTGCTGCAGTATCTTTGTTTGGAGCTAATGATAGATCTAATCCTAGA
CTTGATGAACTCAATAAGACCCTGCAGTCACTTTGCATCATGGCTCATAATGTATGGATA
GCATGGGTGTCCACTGAATTATCTCACATTCTTTCATATGATCTCAATAAAGACGATTCA
CTATCCTCTGCAACTCCTTTGAGGGGCTGGGAAGTCACAGTAATTAAACAAGAGGAAACA
ACTGAGGGTCCCTTGGAAATGCAAATAGCTCTTCCATCGATGCCTTCATTGTACATCATA
TCCTTTCTTTATCAAGCATGTTTGGAGATTCATAAGGTTGGAGGGCACATCCTGGACAGG
ATTATTTTGCATAATTTTGCTTGGGAGCTACTGCAGAAGGTCATCAATATTTATGAAAAT
TTTCTTTCATCTGTTGAATCTGGGAATTCTCCGGTTTCAGAGAAAGGAATTCTGCAAATA
CTGCTAGACTTGCGTTTTATTGGTGATGTCCTATCAGGAGGTACAAGTTCTTCCACAAAC
ACTACTGAAATGCAGACAAAACAGGATTCTTTGCCAAGCACCATCTCCAAGACTTCCTTC
AGGAGAAAACAGTCACAATTACATGCAGACTCAGCTGTCATAGAGCCTATAAACAAGTTA
GTCAACAGGCTCTCGCAAATACTGGATCCTATAGACTGGGCCACGTATGAACCTTACCTG
TGGGAGAATGAGAAGCAATCTTACAAGCGTCATGTTGTTCTTTTTGGTTTTTTGGTCCAA
CTGAATCACATGTACACTGGTACTATGCAAAAATTACCAACAAAATCAAATACAGATTCA
AATATCATGAGATGCTCTCAGGTTCCAAGATTCAAGTACCTACCAATCAGGTAAATGATC
TGTGCCATGTGTAAGTAAATATTGATTTATATATTGTCAAGTGCATGTCCCATTAGATGA
TTTGGAAAGTTGTTTTAGACTTAGTTTTGCAACCTGTGAGCAGTGTAACTACCATTGCAA
TCAGCAGGTATAGTTATGATATGGAAATTTTGTGCTTGACAACATTTGTCGAGAAGATAT
CCATGGATACCTGTAAACCCTGATGTATTTCTCTCCCATAATTCTGGATCATATAATGGC
AACTTTATAGCATTCTGCAAAAAGGCCATCTGCTAAATGTCAGGAGCTTACATTAGTGAG
ATGTATAATTTTACAGCTTCAGTGTTCAATCCTTACAAGTGATATTACAACCTGTAACTT
TGG