Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012614_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:177243572:177247519:1 gene:Zm00001d012614 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclic nucleotide-gated ion channel 4
Sequence	ATGCCAGTGCCAGCCGAGCTCTCGCCGCCGTCCCCTCACGGCGCGCCGCGGACCAGAGCC GGCGAGCAGGACGACAGCACGCTTCCTCCGACGGCGGCCGCCACCGCCACGGCCACGCGG GGCGGCACTGGCAGGAAGCGCCGGCGCGGGGCGCGGGACCCGCGCGCCAGCTGGGCCTGG GAGACGGAGTGGGACCGCGCGTACCTGCTCGCCTGCGCGGCGGGGCTCCTGGTGGACCCG CTCTTCCTGTACGCCGTCGCCGTCAGCGCGCCGCTCATGTGCGTCTTCCTCGACGCCTGG TTCGCGGCCGCGGTCACCGCGCTCCGGTGCGCGGTGGACGCCATGCACGCATCCAACCTG CTGCTGCGGCTCCGAGGGGCGTGCTCGCCGAGGCGGGAAGACACGGACGAGGAGGAGGCG CAGCCGGGGCGCGACGGCGGCGTGCCGGGACGGGGGACGAGGTCCAAGGAGGGGGTTTTC TTGGACGTGCTGGTCATCCTACCGGTGATGCAGGTGGTCGTCTGGGTGGCGACGCCGGCG ATGATACGCGCCGGGTCGACGACCGACGTCATGATCGTGCTGCTGACGGCGTTCCTGCTG GAGTACCTGCCCAAGATCTACCACGCCGTCCGCGTCCTGCGCCGGATGCAGGGCGTCTCC GGCTACCTCTTCGGCACCATCTGGTGGGGGATCGCGCTCAACCTCATGGCCTACTTCGTC GCCGCTCACGCGGTGGGCGCGTGCTGGTACCTGCTCGGCGCGCAGCGGGCCACCAAGTGC CTCAGGGAGCAGTGCGCCCAGGCCGGGAGCGGGTGCGCGCCCTGGGCGCTGGCGTGCGCG GAGCCGCTCTACTACGGCGCCACCGCCAGCAGCGTGGGGGCGGCCAGGCTCGCCTGGGCC GGCAACGCCACGGCCAGGGGCACGTGCCTCGACAGCGCCGACAACTACCAGTACGGGGCC TACCAGTGGACTGTCATGCTGGTGGCCAACCCCAGCAGGGTCGAGAGGGTTCTGCTCCCC ATCTTCTGGGGGCTAATGACTCTCAGCACCTTTGGGAATCTGGAGAGCACGACGGAGTGG CTGGAGATCGTGTTCAACATCGTCACCATCACCGGCGGGCTGATTCTCGTGACGATGCTC ATAGGGAACATCAAGGTGTTCCTGAACGCGACGACGTCGAAGAAGCAGGCGATGCACACG CGGCTGCGCAGCGTGGAGCTGTGGATGAAGCGCAAGGACCTGCCCAGGAGCTACCGGCAC CGGGTGCGCCAGTACGAGCGGCAGCGGTGGGCGGCCACGCGCGGCGTCGACGAGTGCCGC ATCGTCCGTGACCTTCCGGAGGGGCTCCGCCGGGACATCAAGTACCACCTCTGCCTCGGC CTCGTGCGCCAGGTGCCGCTGTTCCAACACATGGACGACCTGGTGCTCGAGAACATCTGC GACAGGGTCAAGTCCCTCATTTTCCCCAAAGGAGAAGTTATTGTCAGAGAAGGGGACCCA GTGAAGAGGATGCTGTTCATCGTGCGTGGCCACCTGCAGAGCAGCCAGGTGCTCCGCAAC GGCGCCGAGAGCTGCTGCATGCTGGGGCCGGGCAACTTCAGCGGCGACGAGCTCCTGTCG TGGTGCCTGCGCCGGCCGTTCCTGGAGCGGCTGCCGGGGTCGTCTTCCACGCTGGCCACG CTGGAGAGCACGGAGGCCTTCGGGCTGGACGCCGCGGACGTCAAGTACGTCACGCAGCAC TTCCGGTACACCTTCACCAACGACAAGGTGCGGCGCAGCGCGCGCTACTACTCGCCCGGG TGGCGCACGTGGGCGGCCGTGGCGGTGCAGCTCGCGTGGCGCCGCTACAAGCACCGCAAG ACGCTCGCGTCGCTGTCGTTCATCCGCCCGCGCCGCCCGCTCTCGCGGTGCTCGTCGCTC GGCGAGGAGAAGCTACGCCTCTATACCGCGCTGCTCACGTCGCCCAAGCCCAACCAGGAC GACCTGCTGTGA

Peptide Sequence

PEP ID	Zm00001d012614_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:177243572:177247519:1 gene:Zm00001d012614 transcript:Zm00001d012614_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclic nucleotide-gated ion channel 4
Sequence	MPVPAELSPPSPHGAPRTRAGEQDDSTLPPTAAATATATRGGTGRKRRRGARDPRASWAW ETEWDRAYLLACAAGLLVDPLFLYAVAVSAPLMCVFLDAWFAAAVTALRCAVDAMHASNL LLRLRGACSPRREDTDEEEAQPGRDGGVPGRGTRSKEGVFLDVLVILPVMQVVVWVATPA MIRAGSTTDVMIVLLTAFLLEYLPKIYHAVRVLRRMQGVSGYLFGTIWWGIALNLMAYFV AAHAVGACWYLLGAQRATKCLREQCAQAGSGCAPWALACAEPLYYGATASSVGAARLAWA GNATARGTCLDSADNYQYGAYQWTVMLVANPSRVERVLLPIFWGLMTLSTFGNLESTTEW LEIVFNIVTITGGLILVTMLIGNIKVFLNATTSKKQAMHTRLRSVELWMKRKDLPRSYRH RVRQYERQRWAATRGVDECRIVRDLPEGLRRDIKYHLCLGLVRQVPLFQHMDDLVLENIC DRVKSLIFPKGEVIVREGDPVKRMLFIVRGHLQSSQVLRNGAESCCMLGPGNFSGDELLS WCLRRPFLERLPGSSSTLATLESTEAFGLDAADVKYVTQHFRYTFTNDKVRRSARYYSPG WRTWAAVAVQLAWRRYKHRKTLASLSFIRPRRPLSRCSSLGEEKLRLYTALLTSPKPNQD DLL

Transcript Sequence

Transcript ID	Zm00001d012614_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:177243572:177247519:1 gene:Zm00001d012614 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclic nucleotide-gated ion channel 4
Sequence	CTCCTCTGCTCCAACACCCACATGCCACGGCCTCACCACCTGGTCAGGCCACGCGTAGCC GTCGGCACTACTCGAGTCGGTAGTCGGTAGCAGCATCCGCTCCATCGATCGGCCATGCCA GTGCCAGCCGAGCTCTCGCCGCCGTCCCCTCACGGCGCGCCGCGGACCAGAGCCGGCGAG CAGGACGACAGCACGCTTCCTCCGACGGCGGCCGCCACCGCCACGGCCACGCGGGGCGGC ACTGGCAGGAAGCGCCGGCGCGGGGCGCGGGACCCGCGCGCCAGCTGGGCCTGGGAGACG GAGTGGGACCGCGCGTACCTGCTCGCCTGCGCGGCGGGGCTCCTGGTGGACCCGCTCTTC CTGTACGCCGTCGCCGTCAGCGCGCCGCTCATGTGCGTCTTCCTCGACGCCTGGTTCGCG GCCGCGGTCACCGCGCTCCGGTGCGCGGTGGACGCCATGCACGCATCCAACCTGCTGCTG CGGCTCCGAGGGGCGTGCTCGCCGAGGCGGGAAGACACGGACGAGGAGGAGGCGCAGCCG GGGCGCGACGGCGGCGTGCCGGGACGGGGGACGAGGTCCAAGGAGGGGGTTTTCTTGGAC GTGCTGGTCATCCTACCGGTGATGCAGGTGGTCGTCTGGGTGGCGACGCCGGCGATGATA CGCGCCGGGTCGACGACCGACGTCATGATCGTGCTGCTGACGGCGTTCCTGCTGGAGTAC CTGCCCAAGATCTACCACGCCGTCCGCGTCCTGCGCCGGATGCAGGGCGTCTCCGGCTAC CTCTTCGGCACCATCTGGTGGGGGATCGCGCTCAACCTCATGGCCTACTTCGTCGCCGCT CACGCGGTGGGCGCGTGCTGGTACCTGCTCGGCGCGCAGCGGGCCACCAAGTGCCTCAGG GAGCAGTGCGCCCAGGCCGGGAGCGGGTGCGCGCCCTGGGCGCTGGCGTGCGCGGAGCCG CTCTACTACGGCGCCACCGCCAGCAGCGTGGGGGCGGCCAGGCTCGCCTGGGCCGGCAAC GCCACGGCCAGGGGCACGTGCCTCGACAGCGCCGACAACTACCAGTACGGGGCCTACCAG TGGACTGTCATGCTGGTGGCCAACCCCAGCAGGGTCGAGAGGGTTCTGCTCCCCATCTTC TGGGGGCTAATGACTCTCAGCACCTTTGGGAATCTGGAGAGCACGACGGAGTGGCTGGAG ATCGTGTTCAACATCGTCACCATCACCGGCGGGCTGATTCTCGTGACGATGCTCATAGGG AACATCAAGGTGTTCCTGAACGCGACGACGTCGAAGAAGCAGGCGATGCACACGCGGCTG CGCAGCGTGGAGCTGTGGATGAAGCGCAAGGACCTGCCCAGGAGCTACCGGCACCGGGTG CGCCAGTACGAGCGGCAGCGGTGGGCGGCCACGCGCGGCGTCGACGAGTGCCGCATCGTC CGTGACCTTCCGGAGGGGCTCCGCCGGGACATCAAGTACCACCTCTGCCTCGGCCTCGTG CGCCAGGTGCCGCTGTTCCAACACATGGACGACCTGGTGCTCGAGAACATCTGCGACAGG GTCAAGTCCCTCATTTTCCCCAAAGGAGAAGTTATTGTCAGAGAAGGGGACCCAGTGAAG AGGATGCTGTTCATCGTGCGTGGCCACCTGCAGAGCAGCCAGGTGCTCCGCAACGGCGCC GAGAGCTGCTGCATGCTGGGGCCGGGCAACTTCAGCGGCGACGAGCTCCTGTCGTGGTGC CTGCGCCGGCCGTTCCTGGAGCGGCTGCCGGGGTCGTCTTCCACGCTGGCCACGCTGGAG AGCACGGAGGCCTTCGGGCTGGACGCCGCGGACGTCAAGTACGTCACGCAGCACTTCCGG TACACCTTCACCAACGACAAGGTGCGGCGCAGCGCGCGCTACTACTCGCCCGGGTGGCGC ACGTGGGCGGCCGTGGCGGTGCAGCTCGCGTGGCGCCGCTACAAGCACCGCAAGACGCTC GCGTCGCTGTCGTTCATCCGCCCGCGCCGCCCGCTCTCGCGGTGCTCGTCGCTCGGCGAG GAGAAGCTACGCCTCTATACCGCGCTGCTCACGTCGCCCAAGCCCAACCAGGACGACCTG CTGTGACTGAGATGCATGCCTGCAGTCTGAACAACGCGCGTCTGTTCAGCGGAGTTGAAG CAAAATGCAGCGAGATGGAAGAAGCTGGTTCTCTATAGTAAAAGTGCATGTCAGAAAGAA CTTGTTGGGCCGTGTCCCTCCGTGTATGTAGAGCCCAAGAGACATGTATATTTATGTGTA CTGTATCAGCTGCAATAGAGAGGGTTCTAGAGACTTCAAAACCCTACCTCAACATGATAT CAGAGCCAAAGCGCGGCGGCGTGCTACTGTAGCAGCGACGACCTACGCGGAGCAGGCGTG GCCGACGGCGAGCTTCAGACTGTGCAGGACGCGAGTAGAGCGGTCTGCCGTGCTGAAGGA AGGAGGAGGTGAAGGTGGGGCGGCAAGCGCAGCAAGAAGCAGGCGGGGAAGACAGATATC TGGCACCGCGTGGAGCTTGGAGGCACCACCAGCTTGGAC