Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012564_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:176755046:176762074:-1 gene:Zm00001d012564 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase RHC1A
Sequence	ATGTCCAATAGGGCCACCCATTGGTGTTATGCCTGTCAGCGCCCAATTCGTCTTCGCGGG CAGGATATCATATGTCCCAACTGCAGTGATGGTTTTATCCAAGAAATCAGTGAGATGGGT GGCGTACTGAACACTTATGGGCTAACTGAACCGGACTTTGAAGAGCGCCAGGCCAGAAGA TTTGGAATGATGGATGCCATATCTTCCCTCATGCGGCAACGGCTGTCAGAAATAGGAAGG GATAGTTTGTTTGATATTCACGGTAGACAAGGGACAGGTACTGAATATGGAAGGAGGTCA ACTGCTATTCCTACGCTGGTATTTGGTGGCATCCCTTCTCCTGCAGTTGGTAGCAGTGAT ATCAATGTTGTCATCAGGGAAGGCCGCAGAGCTGGCGCTGCCCGTCCGAATTTCAGTAGC TTAGTTGTTGGTCCCAGTCTGGAAGCTCTATTTGAGCAGCTACTACTCCAGAACAACCGT CAAGGCCCACCACCTGCTCCACAGTCAGCTATTGACTCCATGCCTGTGGTAAAGATAAAT CGCAGGCATCTTGACGAAGATCCACAGTGTGCAGTTTGCAAAGACAAATTCGAGGTTGGA GCAGAGGCGCGGGAGATGCCGTGCAAGCACTTGTACCATACTGACTGCATCATCCCCTGG CTGGTTCAGCACAATTCCTGCCCTGTTTGCCGTCATCCGCTGCCATCACAGCGATCAGGC AGTAGTACCAGCAGCGCCCGTGTGCCTTCAGCATACTACAACGAAACAGCTTGCCCTCCT GCGGTCGCCAGGGCAGATTTCGATCCTGTGCCTTCAGCATACTACAACGAAACAGCAACT GATCCTCCTGCGGTCACCAGAGCAGATTTCGATCCTGCTCCAGGAAACTACGGCAGCGAA AGCCAGGAAAGTCACGTCCCCTTCTCCTTTCTCTGGCCATTTGGCCCGTCGAGTTCTTAC CAATATGAAGAAAATGTTGATGAACCTGCAGTATACGATCCAAACCAGATAGCATATTCT GCGTGGCACTATGACCACTGA

Peptide Sequence

PEP ID	Zm00001d012564_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:176755046:176762074:-1 gene:Zm00001d012564 transcript:Zm00001d012564_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase RHC1A
Sequence	MSNRATHWCYACQRPIRLRGQDIICPNCSDGFIQEISEMGGVLNTYGLTEPDFEERQARR FGMMDAISSLMRQRLSEIGRDSLFDIHGRQGTGTEYGRRSTAIPTLVFGGIPSPAVGSSD INVVIREGRRAGAARPNFSSLVVGPSLEALFEQLLLQNNRQGPPPAPQSAIDSMPVVKIN RRHLDEDPQCAVCKDKFEVGAEAREMPCKHLYHTDCIIPWLVQHNSCPVCRHPLPSQRSG SSTSSARVPSAYYNETACPPAVARADFDPVPSAYYNETATDPPAVTRADFDPAPGNYGSE SQESHVPFSFLWPFGPSSSYQYEENVDEPAVYDPNQIAYSAWHYDH

Transcript Sequence

Transcript ID	Zm00001d012564_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:176755046:176762074:-1 gene:Zm00001d012564 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase RHC1A
Sequence	TTTCACTCCCCGCGCCACGCGCCTGACTGGGTGCACTGCACTGGTGGTGTGCACGCCCCT CGTCAGTCGTCACTCACTCGCTACCCCATATCCCATTCCCCCCGACGGCGCCTCTGGCAG CAAGGAACAATATGTCCAATAGGGCCACCCATTGGTGTTATGCCTGTCAGCGCCCAATTC GTCTTCGCGGGCAGGATATCATATGTCCCAACTGCAGTGATGGTTTTATCCAAGAAATCA GTGAGATGGGTGGCGTACTGAACACTTATGGGCTAACTGAACCGGACTTTGAAGAGCGCC AGGCCAGAAGATTTGGAATGATGGATGCCATATCTTCCCTCATGCGGCAACGGCTGTCAG AAATAGGAAGGGATAGTTTGTTTGATATTCACGGTAGACAAGGGACAGGTACTGAATATG GAAGGAGGTCAACTGCTATTCCTACGCTGGTATTTGGTGGCATCCCTTCTCCTGCAGTTG GTAGCAGTGATATCAATGTTGTCATCAGGGAAGGCCGCAGAGCTGGCGCTGCCCGTCCGA ATTTCAGTAGCTTAGTTGTTGGTCCCAGTCTGGAAGCTCTATTTGAGCAGCTACTACTCC AGAACAACCGTCAAGGCCCACCACCTGCTCCACAGTCAGCTATTGACTCCATGCCTGTGG TAAAGATAAATCGCAGGCATCTTGACGAAGATCCACAGTGTGCAGTTTGCAAAGACAAAT TCGAGGTTGGAGCAGAGGCGCGGGAGATGCCGTGCAAGCACTTGTACCATACTGACTGCA TCATCCCCTGGCTGGTTCAGCACAATTCCTGCCCTGTTTGCCGTCATCCGCTGCCATCAC AGCGATCAGGCAGTAGTACCAGCAGCGCCCGTGTGCCTTCAGCATACTACAACGAAACAG CTTGCCCTCCTGCGGTCGCCAGGGCAGATTTCGATCCTGTGCCTTCAGCATACTACAACG AAACAGCAACTGATCCTCCTGCGGTCACCAGAGCAGATTTCGATCCTGCTCCAGGAAACT ACGGCAGCGAAAGCCAGGAAAGTCACGTCCCCTTCTCCTTTCTCTGGCCATTTGGCCCGT CGAGTTCTTACCAATATGAAGAAAATGTTGATGAACCTGCAGTATACGATCCAAACCAGA TAGCATATTCTGCGTGGCACTATGACCACTGACTGAAACCCTGAGTTAAAATCAAGATAT CTGCAATTCGTGCCTTGAGCTCTCAGCTTTGGTGAGGCAAAGGGCTGCTTGCCGTATAAA AAATGGATGGTTATTGTGTTCAGTGCATACCCTTGCTACGCATGTCCGTTGTGGAGATAT CAGCTGTGTATAGAACTGGGCGCAATAAACTCTGCTGTAATGCCCGTATATATTCCTTTT CGGTATATCAAGTCTAAAGCTACATAATCCTGTATGTGCAGTAATCGGTGAACTGAGTGC ATCCAGAATATCATGTCATGATAAACATGATTATAATTACATGGTTGTCTTTTTAGACTG AACACA