Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012559_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:8:176633905:176646418:1 gene:Zm00001d012559 gene_biotype:protein_coding transcript_biotype:protein_coding description:Stomatal closure-related actin-binding protein 1
Sequence

ATGCTACACCAGCCAAGCAAGGTCATGGACATGGAGTTTGAGCTTCAGGCACTGCGGACT
CTCATCTCAGAGAAGACTCAGCTATGCAATCAGCTAAAGAAAGAGCTTTGTATTATCCCG
CGAGTTGATGGTGCTTCAAACATCACGAACTGTCCAATTCAGTGGTATCGTGTAATTTCT
GGAGGCACTAGAGAACTCATATCAGGAGCAACAAAATTTATGTATGCCCCAGAACCGTTT
GATGTTGGCCGATTGTTGCAAGCAGAGATAGTTTTGAATGCAGACAAAATTATAGTTCAG
ACAGATGGCCCTGTAGATAACGCTGCAGGACTTGAACGTTATGTGGACTCACTAATGAAA
AGGACGGATATTGAGTTCAATGTAGTAGTAACCCAAATGAATGGGAAGGATTACTCGTCG
AATTCTGTTCATGTATTTCACATTGGAAAGCTGAGAATAAAACTTCGAAAAGGATGGTCC
ACAAAAGCAAGAGAGTCGTATTCCACTACGATGAAGTTATGCGGGAGCCGTGGTGGTGGT
AATGCTGCAGCTAGGGCAGTTTTCTGGCACCCTAGGAAAGGCTCGTCCTACACTCTAGCC
TTCGAAACAGACAGGGACAGGAATGCTGCGATTATGATTGCTCGCAAGTTCGCTTCGAAT
TGCAATATCGCTCTCGCTGGCCCAGGCGACCAAGGCACCTGA

Peptide Sequence

PEP ID

Zm00001d012559_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:8:176633905:176646418:1 gene:Zm00001d012559 transcript:Zm00001d012559_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Stomatal closure-related actin-binding protein 1
Sequence

MLHQPSKVMDMEFELQALRTLISEKTQLCNQLKKELCIIPRVDGASNITNCPIQWYRVIS
GGTRELISGATKFMYAPEPFDVGRLLQAEIVLNADKIIVQTDGPVDNAAGLERYVDSLMK
RTDIEFNVVVTQMNGKDYSSNSVHVFHIGKLRIKLRKGWSTKARESYSTTMKLCGSRGGG
NAAARAVFWHPRKGSSYTLAFETDRDRNAAIMIARKFASNCNIALAGPGDQGT

Transcript Sequence

Transcript ID

Zm00001d012559_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:176633905:176646418:1 gene:Zm00001d012559 gene_biotype:protein_coding transcript_biotype:protein_coding description:Stomatal closure-related actin-binding protein 1
Sequence

GATTGGACCAAACAACCAAATCATTGATCCAGAGGAGACACATGAGGCTGTACCTCTCAA
GGAGATTGTTGCAAAGGAAACAGCGCAGCTGCTAGAGCAGCACAAGCGTCTTTCTGTGCG
TGATCTCAAGGAGAAATTTGAGAAGGGTCTATCTGGCGCTTCCAAGCTTTCTGAAGAGGC
CAAGCGGCGAGAAGCCGCTTCATTAGACAGGCAGGTTCTTCTTAAGAAGCTCAGAGATGT
TTTAGACACACTGAAAGGCCGTGTGGCTGGTCGAAACAGAGACGATGCTGAGGAAGCTAT
CTCACTGGTGGAGGCACTAGCTGTCCAGTTGACACAACGAGAAGGGGAGTTAATTTATGA
GAAGGCTGAAGTAAAAAAATTGGCTAACTTCCTTAAGCAGGCTACTGAAGATGCACGCAA
AGTGGCTGAAGAGGAAAGGGCCCTTGCACTGGCTGAAATTGAAAAGGCTAGAGCTGCGAT
CGAAAAAGTTGAGAAAGCATGGCGTGTACATGATTTTGCGTCAAGTAGCAGAGAGAAGGA
AATAGAGGAACTTAGGAAAGAGGTCCGAGAGGCTAGGAGAATAAAAATGCTACACCAGCC
AAGCAAGGTCATGGACATGGAGTTTGAGCTTCAGGCACTGCGGACTCTCATCTCAGAGAA
GACTCAGCTATGCAATCAGCTAAAGAAAGAGCTTTGTATTATCCCGCGAGTTGATGGTGC
TTCAAACATCACGAACTGTCCAATTCAGTGGTATCGTGTAATTTCTGGAGGCACTAGAGA
ACTCATATCAGGAGCAACAAAATTTATGTATGCCCCAGAACCGTTTGATGTTGGCCGATT
GTTGCAAGCAGAGATAGTTTTGAATGCAGACAAAATTATAGTTCAGACAGATGGCCCTGT
AGATAACGCTGCAGGACTTGAACGTTATGTGGACTCACTAATGAAAAGGACGGATATTGA
GTTCAATGTAGTAGTAACCCAAATGAATGGGAAGGATTACTCGTCGAATTCTGTTCATGT
ATTTCACATTGGAAAGCTGAGAATAAAACTTCGAAAAGGATGGTCCACAAAAGCAAGAGA
GTCGTATTCCACTACGATGAAGTTATGCGGGAGCCGTGGTGGTGGTAATGCTGCAGCTAG
GGCAGTTTTCTGGCACCCTAGGAAAGGCTCGTCCTACACTCTAGCCTTCGAAACAGACAG
GGACAGGAATGCTGCGATTATGATTGCTCGCAAGTTCGCTTCGAATTGCAATATCGCTCT
CGCTGGCCCAGGCGACCAAGGCACCTGATGAAGTGATCACGCTATGTTTTGACGGCGACA
ACAGTACATAATTAGGGCGTGGATTGGCTGATTTTTTGTCGATTTGTGCTTGTGAGGGTA
GAGGTTGTACACGGCGTGAGG