Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012557_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:176581701:176584547:1 gene:Zm00001d012557 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-directed RNA polymerases II and IV subunit 5A
Sequence

ATGTCGGCGGGGCTGGTGACCGACGAGGCCACCGTGGGGCGGCTGTACCGGATCCGGCGC
ACGGTGATGCAGATGCTGCGTGACCGTGGCTACCTGGTGGTGGACCACGAGCTCGCCACC
AGCCGCCGCGACTTCCTCCGCAAGTTCGGCGAGTCCTTCCACCGCGAGGACCTCCTCATC
AACAAGTACAAGAAGAACGACCCATCCGACCAGATATATGTCTTCTTCCCCAACGATGAC
AAGGTAGGGATGAAGCACATCAAGAAGTACGTCGAAATGATGACGCACGAGAACGTCTCC
AGAGCTGTGCTGGTTCTCCAGCAGAACCTAACTCCGTTTGCGAAGTCGTTTCTCATAGAG
CTGGAGCCGAAGATCCATCTGGAAATTTTCCAGGAGGCCGAGATGCTTATAAACATCAAG
GAACATGTCCTTGTTCCTGAGCATCAGGTGCTCACAAACGAGGAGAAGAAGACGCTTCTG
GAGCGGTACACCTTGAAGGAAACTCAGCTTCCAAGAATACAGATCACGGATCCTATTGCT
AGGTACTACGGCCTGAGGCGAGGCCAGGTCGTGAAGATCATCAGGCCCAGCGAGACGGCG
GGCAGATACGTTACATACCGGTACGTTGTATGA

Peptide Sequence

PEP ID

Zm00001d012557_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:176581701:176584547:1 gene:Zm00001d012557 transcript:Zm00001d012557_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-directed RNA polymerases II and IV subunit 5A
Sequence

MSAGLVTDEATVGRLYRIRRTVMQMLRDRGYLVVDHELATSRRDFLRKFGESFHREDLLI
NKYKKNDPSDQIYVFFPNDDKVGMKHIKKYVEMMTHENVSRAVLVLQQNLTPFAKSFLIE
LEPKIHLEIFQEAEMLINIKEHVLVPEHQVLTNEEKKTLLERYTLKETQLPRIQITDPIA
RYYGLRRGQVVKIIRPSETAGRYVTYRYVV

Transcript Sequence

Transcript ID

Zm00001d012557_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:176581701:176584547:1 gene:Zm00001d012557 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-directed RNA polymerases II and IV subunit 5A
Sequence

ACTCCACTGGTGCGGCGCGGAGCGAGGACGACGTCACCTTCTCCACCCCCCGCCCCTGCC
CCTGTGTGGGAGTAGGTGTAGCCGCGTAAGCGGCAGCGGCGTAGGCCTCAGCTCGGCTCA
GCTGCCGCCTCGCTCGAACCAGAGGAGCCAAGCAGAGGAAGCGAGGCGGAGATGTCGGCG
GGGCTGGTGACCGACGAGGCCACCGTGGGGCGGCTGTACCGGATCCGGCGCACGGTGATG
CAGATGCTGCGTGACCGTGGCTACCTGGTGGTGGACCACGAGCTCGCCACCAGCCGCCGC
GACTTCCTCCGCAAGTTCGGCGAGTCCTTCCACCGCGAGGACCTCCTCATCAACAAGTAC
AAGAAGAACGACCCATCCGACCAGATATATGTCTTCTTCCCCAACGATGACAAGGTAGGG
ATGAAGCACATCAAGAAGTACGTCGAAATGATGACGCACGAGAACGTCTCCAGAGCTGTG
CTGGTTCTCCAGCAGAACCTAACTCCGTTTGCGAAGTCGTTTCTCATAGAGCTGGAGCCG
AAGATCCATCTGGAAATTTTCCAGGAGGCCGAGATGCTTATAAACATCAAGGAACATGTC
CTTGTTCCTGAGCATCAGGTGCTCACAAACGAGGAGAAGAAGACGCTTCTGGAGCGGTAC
ACCTTGAAGGAAACTCAGCTTCCAAGAATACAGATCACGGATCCTATTGCTAGGTACTAC
GGCCTGAGGCGAGGCCAGGTCGTGAAGATCATCAGGCCCAGCGAGACGGCGGGCAGATAC
GTTACATACCGGTACGTTGTATGACAGAACGTCAGAACACTGAAGAAGAAGAGAACCACA
GATATGTCAAAAAAAATTCAAGCTACACATACCCCACGTGCTTGCAGACATCTGTATCGC
TTTGTAGCAGCAGCCACTGGTAACGATCGGTGGCTGATGTGTAAGTGTAAGTGGATTGAA
TAAGCTGAGTCAGAGCATACGAGAATTCTCATGTTGTACACTTGTGTTTTATGAACCGCA
TAAACACTCACGACGATAAAAGAAGCCTGTTTTTCGGAGCGACAGAAGCTCCTGCGATCA