Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012536_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:8:176311920:176316418:1 gene:Zm00001d012536 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 36
Sequence

ATGCCGGTTGTTGGGGTCTCGGGGATACTGCGGATGGAGCAGGAGTCATGGGAGAACGCC
GGGCAGAACTTGCAAGATGCGTTCCAGGATCTCAATGCCCTCATGAGCAAAGCTAAGGAA
ATGATGCAGTTAGCAGAAAAAATGAGGCTCAAGCTATTAATGAACTCATCCACTGAATCA
AATTCCAATGATGAAGAGATGGGTTCTAAGCAAGACATGCAGGATTTGCTGTTGAGTGTT
GGCATTGTGTCTCCTGTGACGAAAGAAACTGCTGGTGCGTTGTATCATCAGCAGTTGTCA
CTACAGCTGGCGGACTTTGTAAGAATACCACTTGAGAAAGCAGGTGGTATGATGGCACTA
GTCGATGTTTATTGTCTCTTCAACCGTGCTAGGGGAACAGAGTTGATCTCACCAGAGGAC
CTTTTGCAAGCTTGTTCCCTGTGGGAGAAAGTTGATGTCCCAGTCATGCTCAGGAAATTT
GATAGTGGAGTGAAGGTGATCCAGACCAAAACACATAGTGATGAAGAGGTATTTGCAAGA
ATCTCATCACTTGCACAGAAGCCAGATGCTCTTCAGAAAGGGATTAGCCCAAGTGATGCT
GCATTCACACTGGGAATTGCTCCAGCTTTAGCAAAGGAGCATCTTCTAAATGCAGAAAAC
AAAGGCCTGTTGTGCAGAGATGTTAGTCCAGATGGATTCCGCTTTTTTAGCAATTTATTT
AATGACATTGATCCCCAAAATATTCACTCGCAAAAACCCCATGGGATGTACAAGGCGTGG
ATCTCCGTTGCGATGGCGTCTCACTGA

Peptide Sequence

PEP ID

Zm00001d012536_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:8:176311920:176316418:1 gene:Zm00001d012536 transcript:Zm00001d012536_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 36
Sequence

MPVVGVSGILRMEQESWENAGQNLQDAFQDLNALMSKAKEMMQLAEKMRLKLLMNSSTES
NSNDEEMGSKQDMQDLLLSVGIVSPVTKETAGALYHQQLSLQLADFVRIPLEKAGGMMAL
VDVYCLFNRARGTELISPEDLLQACSLWEKVDVPVMLRKFDSGVKVIQTKTHSDEEVFAR
ISSLAQKPDALQKGISPSDAAFTLGIAPALAKEHLLNAENKGLLCRDVSPDGFRFFSNLF
NDIDPQNIHSQKPHGMYKAWISVAMASH

Transcript Sequence

Transcript ID

Zm00001d012536_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:176311920:176316418:1 gene:Zm00001d012536 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 36
Sequence

GCGATCAGAGGTCATCGCCATCGTCGTGACCTGCAAGGCTGACGTTGATGTGTTCTTCGG
GAGGCTGCTCGAGGCGATCCGTGCAAGGGCTTGGGAGGTGACCCCTGCAGCTGCTCCGTC
GAGTGGCACGTCGGTGGCAGAGGGGGCCGCGCCTACGGAGGACATCGCGATACGGATGCC
GGTTGTTGGGGTCTCGGGGATACTGCGGATGGAGCAGGAGTCATGGGAGAACGCCGGGCA
GAACTTGCAAGATGCGTTCCAGGATCTCAATGCCCTCATGAGCAAAGCTAAGGAAATGAT
GCAGTTAGCAGAAAAAATGAGGCTCAAGCTATTAATGAACTCATCCACTGAATCAAATTC
CAATGATGAAGAGATGGGTTCTAAGCAAGACATGCAGGATTTGCTGTTGAGTGTTGGCAT
TGTGTCTCCTGTGACGAAAGAAACTGCTGGTGCGTTGTATCATCAGCAGTTGTCACTACA
GCTGGCGGACTTTGTAAGAATACCACTTGAGAAAGCAGGTGGTATGATGGCACTAGTCGA
TGTTTATTGTCTCTTCAACCGTGCTAGGGGAACAGAGTTGATCTCACCAGAGGACCTTTT
GCAAGCTTGTTCCCTGTGGGAGAAAGTTGATGTCCCAGTCATGCTCAGGAAATTTGATAG
TGGAGTGAAGGTGATCCAGACCAAAACACATAGTGATGAAGAGGTATTTGCAAGAATCTC
ATCACTTGCACAGAAGCCAGATGCTCTTCAGAAAGGGATTAGCCCAAGTGATGCTGCATT
CACACTGGGAATTGCTCCAGCTTTAGCAAAGGAGCATCTTCTAAATGCAGAAAACAAAGG
CCTGTTGTGCAGAGATGTTAGTCCAGATGGATTCCGCTTTTTTAGCAATTTATTTAATGA
CATTGATCCCCAAAATATTCACTCGCAAAAACCCCATGGGATGTACAAGGCGTGGATCTC
CGTTGCGATGGCGTCTCACTGATACTGGTTGATCAAGCTGGACATCGATGCAATTATAGT
GTACTCTT