Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012528_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:176106383:176108142:-1 gene:Zm00001d012528 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGTGGCGCAGACTCCTCGCGAGAGCGATCCCACTCGCCCCCGCCTCCTCTGGCTTCCCC AAACCGCTAAGCCCCCTCCTCCACATCGGTGGACCGCGCCTAACCACCTCTTCCGGGGAC CCCGTCGCGGACGGTGGCATCGGCGGCGAAGATGACCCTTTCTGCTTCCCGGACCACTAC TACGAGCAGCTCCCGCCCGATGTCGCCCGGGGAGTGGACGCCGTCGTAGCAGCTGCCGAG GCCACCGGCTCCAATGCCACGGACGCCGCGCGGGCCCTCGACGGGTGCGGCGCCGAGGCG TCCGAGCCGCTCGTGGTGGCCTCGCTGGCGCGCCTCCGGAACAGCTGCGCCGCCGCCCAT GCCGCGTTCCGGTGGGCCGCCGCGCAGCCCGGGTACGCGCCGGGCCGGCGCGCGTGCCAC TCCATGCTCGACATCCTCGCCAAGCACCGCCGCTTCGACGCCGCGCGCGCCCTGCTCGAC GAAATGCGCCGCGCGTCCACGGCGTCTCCGGCCGCGGTACTGCTCCTCGTCCGGCGCCAC TGCGCCGCGAGGGACGTCGCGGGCGCCGTCGCCGCCTTCCGAGCGCTCCCGAGCTTCGGG TTCCACACCGGCGCCGCCGAGTTCCATGGCCTCCTGAGCGCGCTTTGCCGGTACAAGAAC GTGCAGGACGCGGAGAATTTGCTGATATCCTGGCAGAAGGAGTTCCCCTTCGAGACCAAG AGCTTCAACATCGTCCTCAACGGATGGTGCAACATTGTCTGCAGCGTGCGGGAGGCGAAG AGGTTCTGGAGCTCCATGGAGAGAAAGGGCATTGCCAGGGATGTTCTGTCCTATGGGAGC ATGATCTCCTGCTTCTCAAAGGCCGGGAGCCTCGACTCAGTCATGAAACTCTTCAACCGC ATGAACGAGGCTGGCGTTGCTCCAGATCGGAAAGTGTACAATGCTATTGTGTTCGCCCTG GCCAAGGGACGGTGCGTGAAGGAGGCGAAGATGCTTGTCAGGAGTATGGAGGAGAAGCAG GTTGCCCCAGACACGGCCACTTTTAACTCTCTCATCGGCCCTCTGTGCAAGGCTCGTCAG TTTCAGGAGGCAATGGAAATGTTCGATGCTATGTTACAGAGAAAGCTGTCTCCTTCAGTA AGGACTTTCCATGCACTGCTTAATGTGGCTAGGAACTCCACCGAAGTTTTTGATCTCTTG GATAAGATGAAACAGTTGCGATGTGAGCCAGAGATGGACACTTACATCATGTTGATCAGA AAGTTCTGCCGGTGGAGAGAGCACGAGAGTGTGGAAAAGCTGTGGAGTGCAATGCCTGCA AATGGCCTGAGCCCTGACCGGAGCGCGTACATTGTATTGATACATGGTTTATTCCTAAAC GGAAGACTAGAGGAGGCAGCAAGGTATTATGAAGAGATGAAAAGTAAGGGCTTTTTACCA GAGAAAAAGACTGAAGAAATGGTAATGGCTTGGCTTGAAGGCAGAGAGCTTGCCAAGGCA TCAGTTATTAGCTCCAAGGGTGGTCGTGGTCCAGTGTCTCTCAAACTTCCCAAGAAGTGA

Peptide Sequence

PEP ID	Zm00001d012528_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:176106383:176108142:-1 gene:Zm00001d012528 transcript:Zm00001d012528_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	MWRRLLARAIPLAPASSGFPKPLSPLLHIGGPRLTTSSGDPVADGGIGGEDDPFCFPDHY YEQLPPDVARGVDAVVAAAEATGSNATDAARALDGCGAEASEPLVVASLARLRNSCAAAH AAFRWAAAQPGYAPGRRACHSMLDILAKHRRFDAARALLDEMRRASTASPAAVLLLVRRH CAARDVAGAVAAFRALPSFGFHTGAAEFHGLLSALCRYKNVQDAENLLISWQKEFPFETK SFNIVLNGWCNIVCSVREAKRFWSSMERKGIARDVLSYGSMISCFSKAGSLDSVMKLFNR MNEAGVAPDRKVYNAIVFALAKGRCVKEAKMLVRSMEEKQVAPDTATFNSLIGPLCKARQ FQEAMEMFDAMLQRKLSPSVRTFHALLNVARNSTEVFDLLDKMKQLRCEPEMDTYIMLIR KFCRWREHESVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEEAARYYEEMKSKGFLP EKKTEEMVMAWLEGRELAKASVISSKGGRGPVSLKLPKK

Transcript Sequence

Transcript ID	Zm00001d012528_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:176106383:176108142:-1 gene:Zm00001d012528 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	CATCAAACGCCTTCTTCGCTCTTCGACAAGCGGGCGGCCGCCAGTTCCTCCTCGATGTGG CGCAGACTCCTCGCGAGAGCGATCCCACTCGCCCCCGCCTCCTCTGGCTTCCCCAAACCG CTAAGCCCCCTCCTCCACATCGGTGGACCGCGCCTAACCACCTCTTCCGGGGACCCCGTC GCGGACGGTGGCATCGGCGGCGAAGATGACCCTTTCTGCTTCCCGGACCACTACTACGAG CAGCTCCCGCCCGATGTCGCCCGGGGAGTGGACGCCGTCGTAGCAGCTGCCGAGGCCACC GGCTCCAATGCCACGGACGCCGCGCGGGCCCTCGACGGGTGCGGCGCCGAGGCGTCCGAG CCGCTCGTGGTGGCCTCGCTGGCGCGCCTCCGGAACAGCTGCGCCGCCGCCCATGCCGCG TTCCGGTGGGCCGCCGCGCAGCCCGGGTACGCGCCGGGCCGGCGCGCGTGCCACTCCATG CTCGACATCCTCGCCAAGCACCGCCGCTTCGACGCCGCGCGCGCCCTGCTCGACGAAATG CGCCGCGCGTCCACGGCGTCTCCGGCCGCGGTACTGCTCCTCGTCCGGCGCCACTGCGCC GCGAGGGACGTCGCGGGCGCCGTCGCCGCCTTCCGAGCGCTCCCGAGCTTCGGGTTCCAC ACCGGCGCCGCCGAGTTCCATGGCCTCCTGAGCGCGCTTTGCCGGTACAAGAACGTGCAG GACGCGGAGAATTTGCTGATATCCTGGCAGAAGGAGTTCCCCTTCGAGACCAAGAGCTTC AACATCGTCCTCAACGGATGGTGCAACATTGTCTGCAGCGTGCGGGAGGCGAAGAGGTTC TGGAGCTCCATGGAGAGAAAGGGCATTGCCAGGGATGTTCTGTCCTATGGGAGCATGATC TCCTGCTTCTCAAAGGCCGGGAGCCTCGACTCAGTCATGAAACTCTTCAACCGCATGAAC GAGGCTGGCGTTGCTCCAGATCGGAAAGTGTACAATGCTATTGTGTTCGCCCTGGCCAAG GGACGGTGCGTGAAGGAGGCGAAGATGCTTGTCAGGAGTATGGAGGAGAAGCAGGTTGCC CCAGACACGGCCACTTTTAACTCTCTCATCGGCCCTCTGTGCAAGGCTCGTCAGTTTCAG GAGGCAATGGAAATGTTCGATGCTATGTTACAGAGAAAGCTGTCTCCTTCAGTAAGGACT TTCCATGCACTGCTTAATGTGGCTAGGAACTCCACCGAAGTTTTTGATCTCTTGGATAAG ATGAAACAGTTGCGATGTGAGCCAGAGATGGACACTTACATCATGTTGATCAGAAAGTTC TGCCGGTGGAGAGAGCACGAGAGTGTGGAAAAGCTGTGGAGTGCAATGCCTGCAAATGGC CTGAGCCCTGACCGGAGCGCGTACATTGTATTGATACATGGTTTATTCCTAAACGGAAGA CTAGAGGAGGCAGCAAGGTATTATGAAGAGATGAAAAGTAAGGGCTTTTTACCAGAGAAA AAGACTGAAGAAATGGTAATGGCTTGGCTTGAAGGCAGAGAGCTTGCCAAGGCATCAGTT ATTAGCTCCAAGGGTGGTCGTGGTCCAGTGTCTCTCAAACTTCCCAAGAAGTGACAAGTT TAAGGTTTAGGGTACGATAAAGTTCAAGAATGAAATGAAACGAAACGATATATGACGGCG CTTATTGTTATTCCTGTAGAACTGCTAAAGTTCAAGAGATATTTTGCTACACAGAAAACG GGGGTTATCCCTAAACCTAA