Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012467_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:175045544:175067069:-1 gene:Zm00001d012467 gene_biotype:protein_coding transcript_biotype:protein_coding description:Outer membrane OMP85 family protein
Sequence	ATGGCGATCGCGGCGGATTCTGCCGCCGATCAAGACCCAAACCCTATACCCAACGAGGCC GCGGGCGAATCCGTCGAGCTACCCGCGTACACTGACCACGGGGAACCCAATGCGGATCTT GCTGACGTGGACTACGAGGATGAAGAGGAGCTGGACGGGGTGACGGCGGAAGCGGCGGCG AGAGACAAGGTGGAGGCAGTGTTCCAGCGGCTGTCGGAAGCCCCCGTTGGCATCCGCGTC CACGACATTATCATCAAAGGCAACACCAAGACCCGCGACGCGCTCATCGAGGCGGAGGTC GTGGGGCTCATCCGCTCCGCCGTCACCGTGCAGGACCTGGTGCGCACCGCCAACATCGCC GCCGTGCGGCTCAGGCTCCTCGACGTGTTTGACTCCGTCCACGTCCTCCTGGATGCTGGC CCTCCCGAGCTGCCTGGCACCACTAACGTTATAATCCAAGTCGTCGAGGCTGCTAACCCC ATCGATGGAAGCGTCGGCTGCTTCTCCAAGCCGGAGGCAAGGTCATGGACAGTTGAAGGA TCAGTCAGATGGAGGAACATATTTGGTTATGGTGACATCTGGGATGCTTCGGGAGCATAT GGGTGGGACCAGTCATCAGAGATAAGCATTGGAGTATCCTTACCAAGATTTAGATCGATA CCAACCCCCTCGACTGCTCGGGCATCACTCTTGTCTCATGACTGGCTGAAATTTTCATCA TACAAGGAACGTCTGCTTGGCCTATCCTTTGGTTTGCTTTCGGACATGCACCATGATTTA TCTTACAATCTGACTTGGCGTACCTTGACTGATCCTTCACAAGCGGCATCAAAATCCATA ACAAGACAGTTAGGACATAACCTTCTTTCTGCATTAAGATATACATATACAATAGATCAA AGGGATTCCCATCTCAGGCCAACCAAAGGATATGCATTTGTCTCAACTTCCCAAGTTAGT GGTCTATGGGGCAGCAAAGGATTGAGATTCTTCCGCCAGGAGTTTGATATTCGCGGGGCT GTTCCATTGGGCTTTTACAATGCTGCCCTAAATGCTGGCATCTCAGCAGGGGTGATTTTA CCGTTGGGGAGGGGGTTTATGGAATCACCTTCATCTGTACCTGATAGATTTTTCCTGGGA GGGCATTCTTCTCCAGTAATCAGTCTTTGTAGTTTAACTTCCCTACTGGGTTTCAAAACA AGAGGAGTTGGGCCAACAGAACTACGGAGAATTGTCCCAAGTGAATCTGTGACAAATGAA TCCACAGCCTCTCCAGGATGGGACTATTTGGGAGGTGATTTCGCAGTTTCTGCATTTGCT GATCTATCCTTTGATTTGCCCTTAAAGTTATTCCAGGATGCTGGCATACATGGCCATGCA TTCCTATCTGCTGGAAATCTCGCCAAGTTGTCCGAGGGTGAGTTCAGAAATTTCTCGTTT TCCAAGTTCGGGCGCACATTTAGGAGCTCAGCTGGTGTTGGCATTATCTTACCCACTAAG CTTCTTCGTGCGGAGATAAACTACTGTTATATACTGAAGCAGTTTGAGCATGATCGTGGA AAGACTGGGATTCAGTTCAGTTTTTCGTCTCCAATGTAG

Peptide Sequence

PEP ID	Zm00001d012467_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:175045544:175067069:-1 gene:Zm00001d012467 transcript:Zm00001d012467_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Outer membrane OMP85 family protein
Sequence	MAIAADSAADQDPNPIPNEAAGESVELPAYTDHGEPNADLADVDYEDEEELDGVTAEAAA RDKVEAVFQRLSEAPVGIRVHDIIIKGNTKTRDALIEAEVVGLIRSAVTVQDLVRTANIA AVRLRLLDVFDSVHVLLDAGPPELPGTTNVIIQVVEAANPIDGSVGCFSKPEARSWTVEG SVRWRNIFGYGDIWDASGAYGWDQSSEISIGVSLPRFRSIPTPSTARASLLSHDWLKFSS YKERLLGLSFGLLSDMHHDLSYNLTWRTLTDPSQAASKSITRQLGHNLLSALRYTYTIDQ RDSHLRPTKGYAFVSTSQVSGLWGSKGLRFFRQEFDIRGAVPLGFYNAALNAGISAGVIL PLGRGFMESPSSVPDRFFLGGHSSPVISLCSLTSLLGFKTRGVGPTELRRIVPSESVTNE STASPGWDYLGGDFAVSAFADLSFDLPLKLFQDAGIHGHAFLSAGNLAKLSEGEFRNFSF SKFGRTFRSSAGVGIILPTKLLRAEINYCYILKQFEHDRGKTGIQFSFSSPM

Transcript Sequence

Transcript ID	Zm00001d012467_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:175045544:175067069:-1 gene:Zm00001d012467 gene_biotype:protein_coding transcript_biotype:protein_coding description:Outer membrane OMP85 family protein
Sequence	GCCGAGGAACGATTCCCTTCGCACAATCGTACTGTTCCCCTCAAACCCCAGCCAGCCATG GCGATCGCGGCGGATTCTGCCGCCGATCAAGACCCAAACCCTATACCCAACGAGGCCGCG GGCGAATCCGTCGAGCTACCCGCGTACACTGACCACGGGGAACCCAATGCGGATCTTGCT GACGTGGACTACGAGGATGAAGAGGAGCTGGACGGGGTGACGGCGGAAGCGGCGGCGAGA GACAAGGTGGAGGCAGTGTTCCAGCGGCTGTCGGAAGCCCCCGTTGGCATCCGCGTCCAC GACATTATCATCAAAGGCAACACCAAGACCCGCGACGCGCTCATCGAGGCGGAGGTCGTG GGGCTCATCCGCTCCGCCGTCACCGTGCAGGACCTGGTGCGCACCGCCAACATCGCCGCC GTGCGGCTCAGGCTCCTCGACGTGTTTGACTCCGTCCACGTCCTCCTGGATGCTGGCCCT CCCGAGCTGCCTGGCACCACTAACGTTATAATCCAAGTCGTCGAGGCTGCTAACCCCATC GATGGAAGCGTCGGCTGCTTCTCCAAGCCGGAGGCAAGGTCATGGACAGTTGAAGGATCA GTCAGATGGAGGAACATATTTGGTTATGGTGACATCTGGGATGCTTCGGGAGCATATGGG TGGGACCAGTCATCAGAGATAAGCATTGGAGTATCCTTACCAAGATTTAGATCGATACCA ACCCCCTCGACTGCTCGGGCATCACTCTTGTCTCATGACTGGCTGAAATTTTCATCATAC AAGGAACGTCTGCTTGGCCTATCCTTTGGTTTGCTTTCGGACATGCACCATGATTTATCT TACAATCTGACTTGGCGTACCTTGACTGATCCTTCACAAGCGGCATCAAAATCCATAACA AGACAGTTAGGACATAACCTTCTTTCTGCATTAAGATATACATATACAATAGATCAAAGG GATTCCCATCTCAGGCCAACCAAAGGATATGCATTTGTCTCAACTTCCCAAGTTAGTGGT CTATGGGGCAGCAAAGGATTGAGATTCTTCCGCCAGGAGTTTGATATTCGCGGGGCTGTT CCATTGGGCTTTTACAATGCTGCCCTAAATGCTGGCATCTCAGCAGGGGTGATTTTACCG TTGGGGAGGGGGTTTATGGAATCACCTTCATCTGTACCTGATAGATTTTTCCTGGGAGGG CATTCTTCTCCAGTAATCAGTCTTTGTAGTTTAACTTCCCTACTGGGTTTCAAAACAAGA GGAGTTGGGCCAACAGAACTACGGAGAATTGTCCCAAGTGAATCTGTGACAAATGAATCC ACAGCCTCTCCAGGATGGGACTATTTGGGAGGTGATTTCGCAGTTTCTGCATTTGCTGAT CTATCCTTTGATTTGCCCTTAAAGTTATTCCAGGATGCTGGCATACATGGCCATGCATTC CTATCTGCTGGAAATCTCGCCAAGTTGTCCGAGGGTGAGTTCAGAAATTTCTCGTTTTCC AAGTTCGGGCGCACATTTAGGAGCTCAGCTGGTGTTGGCATTATCTTACCCACTAAGCTT CTTCGTGCGGAGATAAACTACTGTTATATACTGAAGCAGTTTGAGCATGATCGTGGAAAG ACTGGGATTCAGTTCAGTTTTTCGTCTCCAATGTAGATGTCATGTTTGTGGTTCTCCCTG ACTATGAACAATGCAATGCTTAATCGTGCTGAGCATTTCCGCTCGTTCTATTTTGGTTCT GGCTGAATCATCTTTTTAACTAACTAGGAGTCCAGCAAATCCATATCCAGATGATTGATC TTTTGTATCATGCTCGTTGTTGACCATTAGAACTGGAAGAGTTGCCTTGCTGACGGTTAT TGTGAACTGTGATGGTTTCATGGTCGGCAAAAAAATGCGTATATGTTGGTGGCAATGATG TTTGCTCTATGGGAAGTTTGCATATATATTATACATGACCATGTTTATCAAGGTGGTAAA GCGAAAGCGTGGTGGCGATCTATATCGCCTTATATTCGACGTCATACAAAGGTAATGAAA TGCAAGAGATCAGCATGAAGGGGGAGGAATATTTTTATATGAAAAAAGGAGAAAAGAAGG AAGCACGGGGTAAGAAGTGGTGTCGCCTATTGGATAGATAATAAAAGTTGAAGTGGAAGA GATTTGCAAAGAGTGTTCATTGAATGTCTCCTCTTTGGAATTGCTCTGCAAGAAAACTGT CGTGGGTGTCCTTTTCAGTGCAGTATATTACTGGGTTAGCTTTTAAACTGTAAAAAAATT ACAGAATCTCTTTGTTACTGTCC