Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012464_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:8:174970601:174974661:-1 gene:Zm00001d012464 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:npi414a description:Internal alternative NAD(P)H-ubiquinone oxidoreductase A1 mitochondrial
Sequence	ATGGCCGCCTCCTCCCTGCTCCGGTCGTTCACCCGCCGCAGCTGCGCGGGCCCGAGCGCT TTCGCTTACCGCCACCACCAACGACAGCAACCTTGGTCTCCCTTCTCCACCAGCGCCGCT GCGGTCACGCAGGACGAAGCGGCGAAGAGGTTCCCTGGACTAGGGCCGACGGCGAAGGGG GAGAAGGCCAGGGTGGTGGTGTTGGGGACAGGGTGGGCGGGGTCTCGGCTAATGAAGGAC CTCGATACACAAGGCTACGACGTGGTCTGCGTCGCCCCGCGCAACCACATGGTGTTCACG CCGCTGCTCGCCTCCACCTGCGTCGGCACGCTCGAGTTCCGATCCGTCGCTGAGCCGGTC GCGCGCATCCAGCCCGCCGTGTCCAAGTCGCCGGGCTCCTACTTCCTCCTCGCCCGTTGC ACCGGCGTCGACCCCGACGGCCACACGATTGATTGCGAAACAGTTACAGATGGTGAGAAA GATTCCTTGGAGCCATGGAAATTCAAGGTTGCTTATGACAAGTTGGTTTTTGCCTGTGGA GCTGAGGCATCAACTTTTGGGATACATGGTGTTACCGACCATGCAATCTTTCTTCGCGAA GTTCATCATGCTCAAGAGATTCGGAGACGGCTCCTCCTTAATCTGATGTTGTCTGATCTC CCTGGAATTTCAGAAGAAGAAAAGTGCAGATTATTGCACTGTGTTGTTGTTGGAGGTGGT CCAACAGGGGTGGAATTTAGTGGTGAACTTAGTGATTTTATTATACGAGATGTCAAACAA CGTTATTCACATGTGAAGGATTATATTCATGTGACCCTGATTGAGGCAAATGAGATATTG TCATCATTCGATGTTCGGCTCAGGCAATATGCTACAAAGCAACTAATTAAGTCAGGTGTT AGGCTTGTGCAAGGAATTGTTAAGGATGTGCAGCCCAACAAAATAATTCTTGACAATGGA GAGGAAGTTCCTTATGGTTTACTGGTATGGTCCACCGGAGTTGGTGCTTCACCATTCGTT AAGTCATTGCCATTTCCTAAGTCACCTGGTGGAAGGATCTTTACGAGGTTTTTCAATGTT GACAGGATCGGTGTCAATGAGTGGTTACGTGTCCCTTCTGTTCATGATGTTTATGCCATT GGTGACTGCAGTGGATTTCTCGAGAGCACCGGCAAGGAAGTTCTCCCTGCTTTAGCTCAG GTTGCTGAACGACAAGGCAAGTACCTGGCAAGCCTGCTCAACCATGTCATGAAAGCTGGA GGAGGGCATGCAAACTCTGAGACTGAAGCAGATCTGGGTCGTCCACCCTTTGTGTACAAG CATCTAGGCAGCATGGCAACTGTTGGAAGATACAAAGCTCTAGTCGATCTGAGGCAAAGC AAGGAGTCAAGAGGGATATCTCTTGCAGGATTTGTGAGCTGGTTCATCTGGCGCTCGGCA TATTTAACTCGTGTTGTTAGCTGGAGGAATAGGTTCTATGTGGCTATCAATTGGCTGACC ACTCTCTTATTTGGCCGGGACATAAGCAGAATCTAG

Peptide Sequence

PEP ID	Zm00001d012464_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:8:174970601:174974661:-1 gene:Zm00001d012464 transcript:Zm00001d012464_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:npi414a description:Internal alternative NAD(P)H-ubiquinone oxidoreductase A1 mitochondrial
Sequence	MAASSLLRSFTRRSCAGPSAFAYRHHQRQQPWSPFSTSAAAVTQDEAAKRFPGLGPTAKG EKARVVVLGTGWAGSRLMKDLDTQGYDVVCVAPRNHMVFTPLLASTCVGTLEFRSVAEPV ARIQPAVSKSPGSYFLLARCTGVDPDGHTIDCETVTDGEKDSLEPWKFKVAYDKLVFACG AEASTFGIHGVTDHAIFLREVHHAQEIRRRLLLNLMLSDLPGISEEEKCRLLHCVVVGGG PTGVEFSGELSDFIIRDVKQRYSHVKDYIHVTLIEANEILSSFDVRLRQYATKQLIKSGV RLVQGIVKDVQPNKIILDNGEEVPYGLLVWSTGVGASPFVKSLPFPKSPGGRIFTRFFNV DRIGVNEWLRVPSVHDVYAIGDCSGFLESTGKEVLPALAQVAERQGKYLASLLNHVMKAG GGHANSETEADLGRPPFVYKHLGSMATVGRYKALVDLRQSKESRGISLAGFVSWFIWRSA YLTRVVSWRNRFYVAINWLTTLLFGRDISRI

Transcript Sequence

Transcript ID	Zm00001d012464_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:174970601:174974661:-1 gene:Zm00001d012464 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:npi414a description:Internal alternative NAD(P)H-ubiquinone oxidoreductase A1 mitochondrial
Sequence	ACCCGCCATGGGCGGCGTCCAACGAAATGCGCTTGTTAATTCGCCTCACTTCTCGCTGTG GTCACCACGCTTCACATCTCGCGCGGTAGCGTCCGACAGGCATGGCCGCCTCCTCCCTGC TCCGGTCGTTCACCCGCCGCAGCTGCGCGGGCCCGAGCGCTTTCGCTTACCGCCACCACC AACGACAGCAACCTTGGTCTCCCTTCTCCACCAGCGCCGCTGCGGTCACGCAGGACGAAG CGGCGAAGAGGTTCCCTGGACTAGGGCCGACGGCGAAGGGGGAGAAGGCCAGGGTGGTGG TGTTGGGGACAGGGTGGGCGGGGTCTCGGCTAATGAAGGACCTCGATACACAAGGCTACG ACGTGGTCTGCGTCGCCCCGCGCAACCACATGGTGTTCACGCCGCTGCTCGCCTCCACCT GCGTCGGCACGCTCGAGTTCCGATCCGTCGCTGAGCCGGTCGCGCGCATCCAGCCCGCCG TGTCCAAGTCGCCGGGCTCCTACTTCCTCCTCGCCCGTTGCACCGGCGTCGACCCCGACG GCCACACGATTGATTGCGAAACAGTTACAGATGGTGAGAAAGATTCCTTGGAGCCATGGA AATTCAAGGTTGCTTATGACAAGTTGGTTTTTGCCTGTGGAGCTGAGGCATCAACTTTTG GGATACATGGTGTTACCGACCATGCAATCTTTCTTCGCGAAGTTCATCATGCTCAAGAGA TTCGGAGACGGCTCCTCCTTAATCTGATGTTGTCTGATCTCCCTGGAATTTCAGAAGAAG AAAAGTGCAGATTATTGCACTGTGTTGTTGTTGGAGGTGGTCCAACAGGGGTGGAATTTA GTGGTGAACTTAGTGATTTTATTATACGAGATGTCAAACAACGTTATTCACATGTGAAGG ATTATATTCATGTGACCCTGATTGAGGCAAATGAGATATTGTCATCATTCGATGTTCGGC TCAGGCAATATGCTACAAAGCAACTAATTAAGTCAGGTGTTAGGCTTGTGCAAGGAATTG TTAAGGATGTGCAGCCCAACAAAATAATTCTTGACAATGGAGAGGAAGTTCCTTATGGTT TACTGGTATGGTCCACCGGAGTTGGTGCTTCACCATTCGTTAAGTCATTGCCATTTCCTA AGTCACCTGGTGGAAGGATCTTTACGAGGTTTTTCAATGTTGACAGGATCGGTGTCAATG AGTGGTTACGTGTCCCTTCTGTTCATGATGTTTATGCCATTGGTGACTGCAGTGGATTTC TCGAGAGCACCGGCAAGGAAGTTCTCCCTGCTTTAGCTCAGGTTGCTGAACGACAAGGCA AGTACCTGGCAAGCCTGCTCAACCATGTCATGAAAGCTGGAGGAGGGCATGCAAACTCTG AGACTGAAGCAGATCTGGGTCGTCCACCCTTTGTGTACAAGCATCTAGGCAGCATGGCAA CTGTTGGAAGATACAAAGCTCTAGTCGATCTGAGGCAAAGCAAGGAGTCAAGAGGGATAT CTCTTGCAGGATTTGTGAGCTGGTTCATCTGGCGCTCGGCATATTTAACTCGTGTTGTTA GCTGGAGGAATAGGTTCTATGTGGCTATCAATTGGCTGACCACTCTCTTATTTGGCCGGG ACATAAGCAGAATCTAGAGTGTCTTTGTATACGTACGAACAAGCATATAAGTCGATGTAG AGTTACACGCCACGGTCACTTGCTTGCCACACACCCCTCCGGGGGTCCACTCCTACCACT GTCCCTATTAGCTGTGAATGTAATTCACAGGTGAATTATGAATAAATCTGAGGATACTGC AGTTACTTACATGTGGTGTGAATGTATAATACTCTGTC