Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012451_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:8:174780887:174784022:1 gene:Zm00001d012451 gene_biotype:protein_coding transcript_biotype:protein_coding description:CTD small phosphatase-like protein%3B CTD small phosphatase-like protein isoform 1%3B CTD small phosphatase-like protein isoform 2
Sequence	ATGGCGGCTACGGAGGTGTACTCGCCGACCACGGCGGCGGCAGCGCAGCAGCAGCGGGGG AAGGCGGCATCGCAGGCGTGGCGAGCGGTGGTAGGGTGGATCGGCTTCTTCCTCCAAGTC CTGCTTCAGATCCTCCGGGGCACGCCCTCCTGCGCACAGCTCCTCTCCTTCGTTGGTTTC CGCTATCCGCTCCTCTCCGGACCTGCGGCCTCGGAGCCGTTGCCGGAGGTGGCCTTCATG CCGCTCCACTCCGAGATCCCTGCTGACGCGGCGCCTGCCCCGAAACCTGCGTCTGAGCCC CTGGGCCGCCTCACGTTGATTATAGATGACCCAGTACACGGGGCTGTTATACTCTTGAAC ATATTCTCTTGTGTTTACGCATGGAATATTCTGACAACATTAGGGCTGTCTGTTCAGGTA GTGCTTGACTTGGATGAGACTTTAGTTTCTGCATATGAATCATCTAGTCTTCCTGCCATT GTGCGCACACAAGCTGTTGAAGCAGGATTACATTGCTTTGATATGGAATGTATATCGTCT GATAAGGATGTTGAAGGCAAACAAAAGGTGAATCATGTGACTGTTTTTGAGCGCCCTGGT TTGCATGAGTTCTTGCGGAAAACTAGTGAATTTGCAGATCTTATCCTTTTTACAGCAGGT TTAGAAGGTTATGCTAGACCTTTAGTTGACCGAATAGATGTTCACAATAGATTCAGAATT CGTCTCTATCGCCCATCAACTGTTACCACGGAATATAGAGAACATGTGAAAGATCTTACT CGCGTGTCAAAAGATTTTGGCAGGATTGTCATTGTCGACAACAATCCGTTCAGTTTCATT CTTCAGCCTTTGAATGGAATACCTTGTGTTCCATTTTCAGCTGGACAACATTCTGATGAT CAGCTCATGACGGTTATATTTCCACTCCTGAAGCATCTTTCCCTCCAGAAAGACGTCAGA CCCGTATTGCGTGAAAGATTTCATATGCCAGAATGGTTCCAAAACCATGGGATCCCCCAA ATTAGTCAGGCTGTGTAA

Peptide Sequence

PEP ID	Zm00001d012451_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:8:174780887:174784022:1 gene:Zm00001d012451 transcript:Zm00001d012451_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:CTD small phosphatase-like protein%3B CTD small phosphatase-like protein isoform 1%3B CTD small phosphatase-like protein isoform 2
Sequence	MAATEVYSPTTAAAAQQQRGKAASQAWRAVVGWIGFFLQVLLQILRGTPSCAQLLSFVGF RYPLLSGPAASEPLPEVAFMPLHSEIPADAAPAPKPASEPLGRLTLIIDDPVHGAVILLN IFSCVYAWNILTTLGLSVQVVLDLDETLVSAYESSSLPAIVRTQAVEAGLHCFDMECISS DKDVEGKQKVNHVTVFERPGLHEFLRKTSEFADLILFTAGLEGYARPLVDRIDVHNRFRI RLYRPSTVTTEYREHVKDLTRVSKDFGRIVIVDNNPFSFILQPLNGIPCVPFSAGQHSDD QLMTVIFPLLKHLSLQKDVRPVLRERFHMPEWFQNHGIPQISQAV

Transcript Sequence

Transcript ID	Zm00001d012451_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:174780887:174784022:1 gene:Zm00001d012451 gene_biotype:protein_coding transcript_biotype:protein_coding description:CTD small phosphatase-like protein%3B CTD small phosphatase-like protein isoform 1%3B CTD small phosphatase-like protein isoform 2
Sequence	ACGCGCCCACAAAAACACCACGTACACGGGCGCGGCGCGGAGACCGACCACCACCTCTTC CTCCGGTTGCCTCCGCCCTCGGGCCTCGCCTTCGCTCCATCGTCCCCGTCTCCATCCTCC AGGACCGGCAACCCCACGTAGCGCGACAGCTCGTCGCCGTAGTCCATGGCGGCTACGGAG GTGTACTCGCCGACCACGGCGGCGGCAGCGCAGCAGCAGCGGGGGAAGGCGGCATCGCAG GCGTGGCGAGCGGTGGTAGGGTGGATCGGCTTCTTCCTCCAAGTCCTGCTTCAGATCCTC CGGGGCACGCCCTCCTGCGCACAGCTCCTCTCCTTCGTTGGTTTCCGCTATCCGCTCCTC TCCGGACCTGCGGCCTCGGAGCCGTTGCCGGAGGTGGCCTTCATGCCGCTCCACTCCGAG ATCCCTGCTGACGCGGCGCCTGCCCCGAAACCTGCGTCTGAGCCCCTGGGCCGCCTCACG TTGATTATAGATGACCCAGTACACGGGGCTGTTATACTCTTGAACATATTCTCTTGTGTT TACGCATGGAATATTCTGACAACATTAGGGCTGTCTGTTCAGGTAGTGCTTGACTTGGAT GAGACTTTAGTTTCTGCATATGAATCATCTAGTCTTCCTGCCATTGTGCGCACACAAGCT GTTGAAGCAGGATTACATTGCTTTGATATGGAATGTATATCGTCTGATAAGGATGTTGAA GGCAAACAAAAGGTGAATCATGTGACTGTTTTTGAGCGCCCTGGTTTGCATGAGTTCTTG CGGAAAACTAGTGAATTTGCAGATCTTATCCTTTTTACAGCAGGTTTAGAAGGTTATGCT AGACCTTTAGTTGACCGAATAGATGTTCACAATAGATTCAGAATTCGTCTCTATCGCCCA TCAACTGTTACCACGGAATATAGAGAACATGTGAAAGATCTTACTCGCGTGTCAAAAGAT TTTGGCAGGATTGTCATTGTCGACAACAATCCGTTCAGTTTCATTCTTCAGCCTTTGAAT GGAATACCTTGTGTTCCATTTTCAGCTGGACAACATTCTGATGATCAGCTCATGACGGTT ATATTTCCACTCCTGAAGCATCTTTCCCTCCAGAAAGACGTCAGACCCGTATTGCGTGAA AGATTTCATATGCCAGAATGGTTCCAAAACCATGGGATCCCCCAAATTAGTCAGGCTGTG TAAGTTTTGCTGCCGCACAATGGAATTGTTTTGATGAAGGCTGGAGTGCCTACTATGCTA TAAGCCCCTTAAGGGAGAGCACTTGTACATTATTATCAATATTCACTTAGGGTTCTTGAT AAAACCGAGTCGCTGTTCATATGGAGTTGTCACACCCGAAGATAAGAAGATTGTAATCTA GCATGACCTCAGATTTAAATCTGTGTAGTGGAGCATTTTATATCAATTAATTGTTGTATA TCAGCCTCTGTTGTAAAATTTTATTGTTGACAAGATAGTCTAATGAATAGTTCGTGATCC ATGGATGTCTAGT