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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d012407_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:8:173979559:173982311:1 gene:Zm00001d012407 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:triose phosphate isomerase5 description: triose phosphate isomerase5
Sequence

ATGCTGGTAAACCTGCAGGTGCCCTGGGTCATTTTGGGACATTCTGAGCGCAGAGCTCTG
TTGGGTGAATCCAGTGATTTTGTTGCTGATAAAGTTGCATATGCACTCACTCAAGGTCTC
AAGGTAATTGCTTGCATTGGTGAGACCCTTGAGCAGAGAGAGGCAGGAACAACAATGGAT
GTTGTTGCTGCACAAACAAAGGCTATTGCTGAAAAAATATCAGATTGGACAAATATTGTG
TTGGCATATGAACCAGTTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCT
CAGGAGGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTGCT
GAATTGACAAGGATAATTTATGGAGGGTCTGTAAATGGAGCTAACTGCAAAGAACTTGCA
GCTCAACCAGATGTTGATGGATTCCTTGTTGGTGGAGCCTCATTGAAGCCTGAATTCGTG
GACATCATCAAGTCTGCCACTGTCAAGTCTTCATCTGCCTAG

Peptide Sequence

PEP ID

Zm00001d012407_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:8:173979559:173982311:1 gene:Zm00001d012407 transcript:Zm00001d012407_T007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:triose phosphate isomerase5 description: triose phosphate isomerase5
Sequence

MLVNLQVPWVILGHSERRALLGESSDFVADKVAYALTQGLKVIACIGETLEQREAGTTMD
VVAAQTKAIAEKISDWTNIVLAYEPVWAIGTGKVATPAQAQEVHDGLRKWLHSNVSPAVA
ELTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFVDIIKSATVKSSSA

Transcript Sequence

Transcript ID

Zm00001d012407_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:173979559:173982311:1 gene:Zm00001d012407 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:triose phosphate isomerase5 description: triose phosphate isomerase5
Sequence

TCAGTGCTGAGATGCTGGTAAACCTGCAGGTGCCCTGGGTCATTTTGGGACATTCTGAGC
GCAGAGCTCTGTTGGGTGAATCCAGTGATTTTGTTGCTGATAAAGTTGCATATGCACTCA
CTCAAGGTCTCAAGGTAATTGCTTGCATTGGTGAGACCCTTGAGCAGAGAGAGGCAGGAA
CAACAATGGATGTTGTTGCTGCACAAACAAAGGCTATTGCTGAAAAAATATCAGATTGGA
CAAATATTGTGTTGGCATATGAACCAGTTTGGGCTATTGGTACCGGCAAAGTTGCAACTC
CTGCTCAGGCTCAGGAGGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCC
CTGCAGTTGCTGAATTGACAAGGATAATTTATGGAGGGTCTGTAAATGGAGCTAACTGCA
AAGAACTTGCAGCTCAACCAGATGTTGATGGATTCCTTGTTGGTGGAGCCTCATTGAAGC
CTGAATTCGTGGACATCATCAAGTCTGCCACTGTCAAGTCTTCATCTGCCTAGTGTTTTG
ACTTTCAATGCACCTGGATGCTTGTCGTACTGAATGCTGTTGATCTTTTAAAGCTATTGC
CATTTTACCATCTCGTTTTGGTATTCTAGCTCCAGTGCATCGTTTGTATATCATCATCTC
CTGCGTATGTGCACAGAGTAGTCATTTACCTGAATCATCCTTGTGTACCCTTTGGAACTG
CATAATTGAACTGCGCTATTCTAG