Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d012394_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:173522111:173525090:-1 gene:Zm00001d012394 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phytoene synthase2 description: phytoene synthase2
Sequence	ATGGCTGCGGGCTCGTCCGCGGTGTGGGCCGCGCAACACCCCGCCTGCAGCGGCGGCAAG TTCCACCACCTGTCGCCGTCCCACTCCCACTGCCGCCCGCGCCGCGCCCTCCAGACGCCG CCCGCGCTCCCCGCGAGACGGAGCGGCGCCTCCCCGCCGCGCGCCAGCCTCGCCGCCGCC GCGCCTGCGGTGGCGGTGAGGACGGCTTCGGAGGAGGCCGTGTACGAGGTGGTGCTGCGG CAGGCGGCACTCGTGGAGGCCGCGACGCCACAGAGGCGCCGGACGCGGCAGCCGAGGTGG GCGGAGGAAGAGGAGGAGGAGAGGGTCCTCGGCTGGGGCCTCCTCGGCGACGCCTACGAC CGCTGCGGCGAGGTCTGCGCCGAGTACGCCAAGACCTTTTACCTCGGCACGCAGCTCATG ACTCCTGAGCGGCGCAAAGCCGTCTGGGCGATCTACGTGTGGTGCAGAAGAACTGACGAG CTAGTGGACGGTCCCAACGCGTCCTACATCACGCCGACCGCTCTCGACCGCTGGGAGAAG CGGCTGGAGGATCTCTTTGAGGGCCGCCCGTACGACATGTACGACGCCGCGCTCTCGGAC ACTGTGTCCAAGTTCCCCGTCGATATCCAGCCGTTCAAAGACATGGTCCAAGGAATGAGG CTGGACCTGTGGAAGTCGAGGTACATGACCTTCGACGAGCTCTACCTCTACTGCTACTAC GTCGCCGGCACCGTCGGCCTCATGACGGTGCCTGTCATGGGCATCGCTCCCGACTCCAAG GCCTCGACCGAGAGCGTGTACAATGCTGCTCTGGCTCTCGGCATCGCTAACCAGCTGACG AATATTCTCAGAGACGTGGGCGAAGATGCGAGGAGGGGGAGAATATACCTTCCGTTGGAC GAGCTTGCGCAGGCAGGTCTCACGGAAGAGGACATATTCAGAGGGAAAGTGACCGGCAAG TGGAGGAGGTTCATGAAGGGCCAGATCCAGCGTGCCAGGCTCTTCTTTGATGAGGCGGAG AAGGGCGTCACCCATCTCGACTCTGCTAGCAGATGGCCGGTGCTCGCGTCTCTGTGGCTG TACAGGCAGATCCTTGATGCCATTGAGGCAAACGACTACAACAACTTCACCAAGCGTGCG TACGTCGGCAAGGCCAAGAAGCTGCTGTCGTTACCGCTTGCATATGCAAGGGCTGCGGTT GCACCATGA

Peptide Sequence

PEP ID	Zm00001d012394_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:173522111:173525090:-1 gene:Zm00001d012394 transcript:Zm00001d012394_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phytoene synthase2 description: phytoene synthase2
Sequence	MAAGSSAVWAAQHPACSGGKFHHLSPSHSHCRPRRALQTPPALPARRSGASPPRASLAAA APAVAVRTASEEAVYEVVLRQAALVEAATPQRRRTRQPRWAEEEEEERVLGWGLLGDAYD RCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPTALDRWEK RLEDLFEGRPYDMYDAALSDTVSKFPVDIQPFKDMVQGMRLDLWKSRYMTFDELYLYCYY VAGTVGLMTVPVMGIAPDSKASTESVYNAALALGIANQLTNILRDVGEDARRGRIYLPLD ELAQAGLTEEDIFRGKVTGKWRRFMKGQIQRARLFFDEAEKGVTHLDSASRWPVLASLWL YRQILDAIEANDYNNFTKRAYVGKAKKLLSLPLAYARAAVAP

Transcript Sequence

Transcript ID	Zm00001d012394_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:173522111:173525090:-1 gene:Zm00001d012394 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phytoene synthase2 description: phytoene synthase2
Sequence	CCCCGAGGCCTCCCGTCCCCTCCTCGACGACACCCACAAACCCATCCCATCTCCCAACAC CTCCGCCGGTCCGCCCCAGTCTCTCCCACTCCCAGCGCCCACCGGCACCGCCGCCGCACG CGACCCCTCGTCCCCGTCCCCCGCCCCGACCGCACGCCGGAATGGCTGCGGGCTCGTCCG CGGTGTGGGCCGCGCAACACCCCGCCTGCAGCGGCGGCAAGTTCCACCACCTGTCGCCGT CCCACTCCCACTGCCGCCCGCGCCGCGCCCTCCAGACGCCGCCCGCGCTCCCCGCGAGAC GGAGCGGCGCCTCCCCGCCGCGCGCCAGCCTCGCCGCCGCCGCGCCTGCGGTGGCGGTGA GGACGGCTTCGGAGGAGGCCGTGTACGAGGTGGTGCTGCGGCAGGCGGCACTCGTGGAGG CCGCGACGCCACAGAGGCGCCGGACGCGGCAGCCGAGGTGGGCGGAGGAAGAGGAGGAGG AGAGGGTCCTCGGCTGGGGCCTCCTCGGCGACGCCTACGACCGCTGCGGCGAGGTCTGCG CCGAGTACGCCAAGACCTTTTACCTCGGCACGCAGCTCATGACTCCTGAGCGGCGCAAAG CCGTCTGGGCGATCTACGTGTGGTGCAGAAGAACTGACGAGCTAGTGGACGGTCCCAACG CGTCCTACATCACGCCGACCGCTCTCGACCGCTGGGAGAAGCGGCTGGAGGATCTCTTTG AGGGCCGCCCGTACGACATGTACGACGCCGCGCTCTCGGACACTGTGTCCAAGTTCCCCG TCGATATCCAGCCGTTCAAAGACATGGTCCAAGGAATGAGGCTGGACCTGTGGAAGTCGA GGTACATGACCTTCGACGAGCTCTACCTCTACTGCTACTACGTCGCCGGCACCGTCGGCC TCATGACGGTGCCTGTCATGGGCATCGCTCCCGACTCCAAGGCCTCGACCGAGAGCGTGT ACAATGCTGCTCTGGCTCTCGGCATCGCTAACCAGCTGACGAATATTCTCAGAGACGTGG GCGAAGATGCGAGGAGGGGGAGAATATACCTTCCGTTGGACGAGCTTGCGCAGGCAGGTC TCACGGAAGAGGACATATTCAGAGGGAAAGTGACCGGCAAGTGGAGGAGGTTCATGAAGG GCCAGATCCAGCGTGCCAGGCTCTTCTTTGATGAGGCGGAGAAGGGCGTCACCCATCTCG ACTCTGCTAGCAGATGGCCGGTGCTCGCGTCTCTGTGGCTGTACAGGCAGATCCTTGATG CCATTGAGGCAAACGACTACAACAACTTCACCAAGCGTGCGTACGTCGGCAAGGCCAAGA AGCTGCTGTCGTTACCGCTTGCATATGCAAGGGCTGCGGTTGCACCATGAACCATCCGTA GATCACATCTTTTTTTTCTTTTCTTTTCCAAACCCACCTTGTTTTGCCCCACCCTTCCTT TTTTTTTTGTATATAATCAGCTTCAGCTGCCTGCATGGCATAAGCCTTGCCTGTTCAGGG TGATTCCATGTCCCTAAATACTCAATCAGCTCTTGTTACAAGGAATGGAGAATTAGAATT CGAGAAGCGT